Mus pahari (shrew mouse): 110336601
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Entry
110336601 CDS
T05929
Symbol
Thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
110336601 (Thsd1)
Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
110336601 (Thsd1)
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Gene cluster
GFIT
Motif
Pfam:
THSD1_D2
THSD1_N
THSD1_D3
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
110336601
NCBI-ProteinID:
XP_021074922
Ensembl:
MGP_PahariEiJ_G0021361
LinkDB
All DBs
Position
19:40206556..40235758
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AA seq
851 aa
AA seq
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MKPMLKDFSNLLLVVLCDYVLGEAEYLLLQEPVHVALSNRTVSVGFHYLSDVNGTPRNVS
VMLWEANTNRTLTTKYLLTNQAQGTLHFECFYFKEAGDYWFVMIPEVTDNGTQVPLWEKS
AFLKVEWPVFHIDLNRTTRAAEGTFQVGVFTTQPLCLFPVDKPDMLVDVIFTDHLPEART
SLGQPLEIRASKRTKLTQGQWVEFGCAPVGVEAYVTVMLRLLGQDSVIASTGPIDLAQKF
GYKLMMAPEVTCESVLEVMVLPPPCVFVQGVLAVYKKAPKHLEERTFQMAENRLPLGERR
TVFNCTLFDVGKNKYCFNFGIVKKSHFSAKECMLIQRNIETWGPWQPWSPCSTTCGDAVR
ERRRLCVTSFPSRPSCSGMSSETSPCSLEECAVFRSPGPSPIPPQDPVKSNNVVTVTGIS
LCLFIIFATVLITLWRRFGRAPKCSTPARHNSIHSPGFRKNSDEENICELSEPRGSFSDA
GDGPRGSPGDTGIPLTYRCSASAPPEDETSGSESFQSNAQKIIPPLFSYRLAQQQLKEMK
KKGLTETTKVYHVSQSPLTDTVVDATASPPLDLECPEEAAASKFRIKSPFLDQPGAGTGE
RPPSRLDGIVPPPGCAVSPSQTLIRKSQMRSTGGRDGSSERCHSRSSLFRRTASFHETKQ
SRPFRERSLSALTPRQVPAYSSRMRTWDQMEDRCRPPSRSTHLLPERPEHFQGAGRTSSP
LGPLSKSYTVGHPRRKPDPGDRQAGLVAGAEKMEPHRAHRGPSPSHRSASRKQSSPIFLK
DSYQKVSQLSPSHFRKDKCQSFPIHPEFAFYDNTSFRLTEAEQRMLDLPGYFGSNEEDET
TSTLSVEKLVI
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccatgttgaaagacttttcaaatctcttgctggtggtgctctgtgactatgtc
cttggagaagctgaatacctcctcttacaggagccagtccatgtggcactgagcaacaga
acggtgtcagtgggtttccactacctcagtgacgtcaacgggaccccgaggaatgtgtct
gtcatgctgtgggaggccaacaccaatcggactcttaccactaagtacctcctgaccaac
caggcccaagggacacttcattttgaatgcttctacttcaaggaggctggtgactactgg
tttgtaatgatcccagaagtgacagacaatggcacgcaagttcccctctgggagaaaagt
gcctttctgaaggtagaatggcctgtctttcacatcgatttaaataggaccaccagggca
gcagaaggcaccttccaagtgggtgtttttaccacccaaccgctctgcctgtttcctgtg
gacaagccagacatgctggtggatgttattttcactgaccatcttccggaggcaagaaca
agtttgggacagccgctggagatcagagccagcaaaaggacaaaactcactcaaggtcag
tgggtcgagtttggctgtgcacccgtaggggtggaagcctacgttacagtcatgctgagg
ctgttgggtcaagactcagtcatcgcttctacaggaccaattgacctggctcaaaaattt
ggatacaaattgatgatggcaccggaagtcacgtgtgagtctgtgctggaggtgatggtt
ctgccacctccttgtgtcttcgtccaaggagtcctggctgtttacaaaaaggcccccaaa
cacctggaggagaggactttccagatggctgaaaacaggctgcccctgggagagaggaga
acggtgtttaactgcactctgtttgacgtagggaagaacaaatactgctttaactttgga
attgtgaagaaaagccatttttctgcaaaggaatgcatgctaattcagagaaatatagaa
acttggggaccatggcagccgtggagcccgtgtagcaccacgtgcggggatgctgtccga
gagcgtcgccgcctgtgtgtcacttctttcccctccagacccagctgctctggaatgtcc
tcagagacctctccatgctccctggaggagtgtgctgttttccggtcaccaggcccatcg
cctattccaccccaggacccggtgaagtccaacaacgtggttaccgtcacagggatctcc
ctgtgcctgttcatcatctttgccacggtgctcatcactctctggagaaggttcggccga
gcccccaaatgcagcacgcccgctcgccacaactccatccattcccctggcttccggaag
aactcggatgaggagaacatctgcgagctgagtgagcctcgtggaagcttctcggacgcg
ggtgacggacctaggggaagcccaggggacacaggcatcccattgacctacaggtgcagt
gcatcagctcctcctgaggatgagacctccggcagtgagagcttccagtccaacgctcag
aagatcatcccacccctgtttagctaccgccttgcccagcagcagttgaaggagatgaag
aagaaagggctgaccgagaccaccaaagtgtaccacgtgtctcagagccccctgacagac
actgtagtggatgccacggccagcccccccttagacctggaatgccccgaagaggcagca
gcaagtaagttccgaatcaaatctccatttctggaccagcctggggcaggtactggggaa
aggcccccctccaggctggatggcatcgtgcctccgcccggctgtgcggtcagccccagc
cagaccctgatccgcaagtcgcagatgaggtcgactggcggtagagatggctcgtcggag
aggtgccactccagaagttccctcttcaggaggactgctagttttcatgaaaccaagcag
tctcgccctttccgggagaggagtttgtcagccctgactccccgccaggtccccgcctac
agttccaggatgcggacctgggaccagatggaggataggtgtcggcctcccagtcgaagt
acccacctgcttccagagagaccagagcacttccaaggggcaggtcggaccagcagtcct
ttgggtccactctccaaatcctacactgtggggcatcccaggaggaaaccggacccgggg
gatcgtcaggctggattggtggcaggagctgagaaaatggagcctcaccgagctcacagg
ggaccgtcccccagtcacaggagtgcctcaaggaagcagtcttcccccattttcctcaaa
gatagctaccagaaagtcagtcagcttagcccttctcacttcagaaaagataaatgccag
agcttccccatccaccccgagttcgccttctatgacaatacctctttccgcctcaccgag
gctgagcagagaatgctggacctcccaggatacttcggctccaacgaagaggatgaaacc
acaagtacacttagcgtggagaagttagtgatctag
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