Mus pahari (shrew mouse): 110336616
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Entry
110336616 CDS
T05929
Symbol
Exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110336616 (Exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110336616 (Exosc5)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110336616 (Exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110336616
NCBI-ProteinID:
XP_021074940
Ensembl:
MGP_PahariEiJ_G0021229
LinkDB
All DBs
Position
19:21129197..21136974
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AA seq
235 aa
AA seq
DB search
MEGAKHADAKVLTDTGTESSPRSPVCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLVRNTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGNLVLDPTTKQEKEARAI
LTFALDSAEQKLLMSTTKGLYSDAELQQCLAAAQAASQHIFRFYRESLQRRYSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcaaagcatgcagacgccaaggtactcactgacaccggaacagaatccagc
ccccgaagtccagtctgcagcctccggcactttgcttgtgagcaaaacctgctgtcccgg
ccggatggatctgcttcttttcttcaaggtgatacctctgtcctggctggagtctatggg
ccggccgaggtgaaggtcagcaaagaaatcttcaacaaggccacccttgaagtgatcctg
aggccgaagatcgggctgcccggcgtggccgagaagagccgagagcggctggtcaggaat
acctgtgaagctgtggttctaggggccctgcacccccggacctcaatcaccgtggtgctg
caggtggtgagcgacgctggctctctcttggcctgttgcctgaacgctgcttgcatggct
ttggtggatgcaggtgtgcccatgcgggccctcttctgtggggtcacctgtgccctggac
tctgatggaaatctcgtgctggaccccacgaccaagcaagaaaaggaggcccgggccatc
ctgacctttgctctggatagtgctgagcagaagctgctcatgtccaccaccaaggggctc
tattctgacgctgagctccagcagtgtctggccgctgcccaagctgcctcacagcacatc
ttccgcttctacagggaatcactgcagaggcgctactccaagagctga
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