Mus pahari (shrew mouse): 110336621
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Entry
110336621 CDS
T05929
Symbol
Tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34 isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpah03016
]
110336621 (Tsen34)
Enzymes [BR:
mpah01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
110336621 (Tsen34)
Transfer RNA biogenesis [BR:
mpah03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
110336621 (Tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
110336621
NCBI-ProteinID:
XP_021074948
Ensembl:
MGP_PahariEiJ_G0020968
LinkDB
All DBs
Position
19:564405..572292
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AA seq
317 aa
AA seq
DB search
MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLLPEEARLL
AEIGAVTLVSAPRPDPRNHGLALASFKRQQEQSFQDQNTLAAEARETRRQELLEKIVEGQ
AAKKQKLEQDSGADEEGQEAGGSEATQGSSETSDDGQASAEQEGAAPPLDSSSPQPGPSN
GVTPLPRSALLIQLATARPRPVKAKPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFF
LSAAGKFGGDFLVYPGDPLRFHAHYIAQCWSAEDPIPLQDLVSAGRLGTSVRKTLLLCSP
QPDGKVVYTSLQWASLQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtggaggtcgctaatggccgctcgctggtgtggggagccgaggccgtgcag
gcgctgcgggagcgcctgggagtcgggggacgcacggtgggcgccctgccccgcgggccc
cgccagaactcgcgcctgggccttccgcttctgctgctgcccgaagaagcccggctcctg
gccgagataggcgccgtgaccctagtcagcgccccgcgcccggatccccgcaaccatggc
ttggccctagcatcgttcaaacgccagcaagagcagagtttccaggatcagaacactttg
gcagccgaggcgcgggagacccggcgtcaggagcttctagagaagatcgtagagggccag
gctgccaagaagcagaagctggaacaggattcaggggcagatgaggaaggccaagaagcc
ggtggaagtgaagctacccaagggagtagtgagaccagtgatgatggccaggcttctgcg
gagcaggagggagcagctccacccctagattcttcatctccccaaccaggaccttcaaat
ggggtgactcccttgcccagatcagccctgcttatccagctggccactgccaggcctcgg
cctgtaaaagctaagcctctggactggcgtgtgcagtccaaagactggccccatgctggc
cgtcctgcccacgagctgcgctacagcatctacagagacctgtgggagagaggtttcttc
ctcagcgctgcagggaagtttggtggtgacttcctggtctatcctggtgatccgctgcgt
ttccacgctcactacattgctcagtgctggtctgctgaggaccccatcccacttcaggac
ctggtctctgcaggccgcctggggaccagtgtcaggaagaccctgcttctctgctcccct
cagcctgatgggaaggtggtctacacatccctgcagtgggccagcctgcagtga
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