Mus pahari (shrew mouse): 110336777
Help
Entry
110336777 CDS
T05929
Symbol
Nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
110336777 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
110336777 (Nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NACHT
AAA_16
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_NWD2_C
PEP5_VPS11_N
KNTC1_N
AAA_22
NPHP3_N
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_Vps41
nSTAND1
CNH
PQQ_2
AAA
ATPase_2
RuvB_N
RNA_helicase
Beta-prop_RIG_1st
nSTAND3
DUF4062
AAA_5
Bac_DnaA
Motif
Other DBs
NCBI-GeneID:
110336777
NCBI-ProteinID:
XP_021075169
Ensembl:
MGP_PahariEiJ_G0021690
LinkDB
All DBs
Position
19:87306817..87373761
Genome browser
AA seq
1563 aa
AA seq
DB search
MDTEREALQCTAYPEVQSFCQRHGLAFEVVDLRWGIPNTQATDYLTTELCLEELERCQKT
SIGPAFVALLGDLYGPCPVPRRIEEKEWEALRAQLTSRPRDLELVTRHFQRDDNTIPPTY
VLQPSGSLVVPGPEEATLTSVLRGGAQEAWRLGLISQEQWMCYHRSVIEWEIELGLLNSA
RGDQGATVFLRDVQDLSKHILDDCSLKMVDRLADGCLDTNAQSLLSGLKGRILDAQPGAL
KSHHLSWSRDLVNPKNKAHARYLKQLSEQFVARTNHQVLEQLRELELARQELGWLYQEIR
HHLWQSTESTKIFCGHQELLAQLRQRLRQDESRTHTPLLLFGPPGIGKTSLMCKLAQQVP
ELLGCKTVVVLRLLGTSKLSLDARSLLRSLSFQVCLAYGLPLPPAQVLEAHSRVGHFFHT
LLHTVSQRNFESLVLLLDSVDDLDSMCHSPRVSWLPLKCPPRVHLILSTCSGQQVLHNLH
QTLKDPSTYWEVKALSGSQGQEFIELLLAAERRMLSLGQRDVLWASLPECGHPGRLRLAF
EEARKWASFTVPVPLATTAEEATHQLCIRLEETHGALLVAHVLGYIVSSRFGLSEAELKD
VLSLDDEVLQAVYRDWTPPSKELLRFPPLLWVRLRRDLGHCLVRRPVDGCMLLAIAHRQL
SQVIQVRYLSGPERAKRHGVLAEFFSGAWSQGIKKLITLPLVGKPLNLDRKVAPQPLWFS
ATVANLRKLTELPFHLLHAGRLEELKQEVLGNMSWISCRGISGGIEDLLDDFDMCAPHMD
SPEVDLVREAIQLCGPAVELRGLEKSVLYTELLARLLFFAASHPAMIGQLCQQAQSWFRA
CPYPMLVPLAGFLQPPGGPLRATLTGCHKGITAIAWSLEEKLLVVGTQDGAMVVWDVEEQ
QVVHILMGHTAEVRCVRVFAQGTLAISASKDHTLRLWSLLSGQEKVTILDGGSPNPTELQ
SWDLHVDEINNVVYSTSGARIHVWNLETSKLVFCITGDVSDPWVCVALLAAQGLLLALSK
GGQVSLWSSATGKLQEKHQLSSIKEETPTCAVSTPTRARLVAGFSSGSIALVSTGEDRLL
EKLPEAVGFLVVSEDDSLLVAGFGRFVRIFLADSQGFHRFMASDLEHEDMVETAVLGPEN
NLIITGSQDALIQVWSLSEQGTLLNVLEGVGAPVSLLVRSGTLVVSASRKSSSFKVWDLK
STQKLQSPTPFLDRTGLAAVSHHGSYVYFPKVGDKNKVTIWDLAEGEEQDCLDTSNEIRC
LEVAEQAKLLFTGLVSGIVLVFPLNSRQDVLCIPPPEARKAVNCMSLSKNEDRLAIAYDN
IVLVLDVSPGDPCPAIEGPIYTFYTQLPETIMSVAVLADYRVVYGMSDGSLFLYDCAWSK
VFPLEAHGSRVSCVEVSHGEQLAVSGAEDALLCLWDLQACRGMFTMSYESSCYRGVRCAC
FSRDDKHVFAGMEDRSVTAWSTVDGTLLAVQFVHAVINRIIPTSNGFMAPTSHGYLIRER
FQCPSVRASQQDPLKNFKKAVWLVKTRQREELAAAEAPQDAEPVAVEGKESKSNKRSQVC
LIL
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggacacagagcgagaagccctgcagtgcacagcctaccctgaggttcagagcttctgc
caaaggcacggcttggcgtttgaggtggttgatctgaggtggggtattccgaatacgcag
gccactgactacctgaccacggaactctgcttagaagagctggagcgctgtcagaaaaca
tccataggaccagcttttgtggccctcctgggtgacctgtacggcccctgcccggttccc
cgaaggattgaggaaaaggagtgggaggcactaagagctcagctgacctccaggcctcga
gatctggagctggtgaccagacatttccagagagacgacaacaccattcctccaacctac
gtcttgcagccttcaggctcactggtggtcccagggcccgaggaggccaccctaacctct
gtcctgagaggtggagcccaggaggcctggaggctaggcctcatcagtcaggagcaatgg
atgtgctatcatcgatcagtcattgagtgggagatcgagctcggcctactgaactcagca
cggggggaccagggagctaccgtcttcttgagagatgtacaggacctcagtaaacacatc
ttggatgattgctctctgaagatggtggatcggctggcagatggctgtctggataccaat
gcccagagtcttctcagtggtcttaaagggcgcatactagatgcacagcctggagcccta
aagtcccaccacctgtcctggagccgagacctggtcaaccccaagaacaaggctcacgct
cgttacctaaagcagttgagcgagcagttcgtggccaggaccaaccatcaggtcctggag
cagcttcgagagctggagttggccagacaggagctgggttggctctaccaagagatccgc
caccacctctggcagagcacagagtctaccaagatcttctgcggccaccaggagctcctg
gcccagctcaggcagcggctcagacaggatgagagccggacacatactcccttgcttctc
tttggaccaccaggcattgggaagacctccctcatgtgcaagctagcccagcaggtacca
gagctgcttggctgcaagacagtggttgtcctgaggctgctagggacatcaaagctgagc
ctggatgcccgcagcctcctcaggagcctgtccttccaagtgtgcttggcatatgggctg
ccactgcccccagcccaggtcctggaggcccacagcagggtgggccatttcttccacact
ctcctccacaccgtgtcccagaggaactttgagtccctggtattgctcctggactccgtg
gatgacctggactccatgtgccattctccgagggtctcttggctgcccctcaagtgtccc
ccaagggtccatctcattctctctacttgttcaggccagcaggttttacataatctgcat
cagaccctcaaggaccccagcacctactgggaggtgaaggccctgtctggaagtcaaggc
caggagttcatagagctgttgctggctgcagagaggaggatgctgagcctgggtcagaga
gatgtcctctgggccagcctcccagagtgtggccacccagggaggctaagactggccttt
gaggaggctcggaagtgggcctccttcactgtgccagtgcccttggccactacagcagag
gaagccacacaccagctctgtatacgcctggaggagacacatggggcactgctggtggct
catgtactgggctatattgtgtcttccaggttcggcctctcagaagcagagctgaaggat
gtattatctttggatgatgaagtcttgcaggctgtgtaccgggattggacgccacccagc
aaagagttgctgcggttcccgcccctgctgtgggtgcggctccgccgggacctgggacac
tgcctggtcaggaggcccgtggatggctgcatgctactggccattgcacacagacagctg
tcccaggtaatccaagttcgatatctgtctgggcctgagagagccaagaggcatggcgtg
ctagctgaattcttctctggagcctggagccaggggatcaagaaacttatcaccctgccg
cttgtggggaagcccctgaacctggaccgcaaggtggccccacagccattgtggttctca
gccacagtggccaacctgaggaagctgaccgaactgcccttccatctgctgcatgcaggc
cgcttggaggagttgaagcaggaggttctggggaacatgagttggatctcctgtcggggc
atctctggaggcattgaggacctactggatgattttgacatgtgtgcccctcacatggac
tctcctgaggttgatctggttagagaagccatccagctgtgtggccctgctgtggagctc
cggggcctggagaagagcgttctatacaccgaactcctggccagactccttttctttgct
gcatcgcatccagcaatgatcggacagctgtgccaacaagcccagagctggttccgtgcc
tgcccctacccaatgctggtgcccctggcaggattcctgcagccacctggtggacctctt
cgagccactcttactgggtgtcacaaaggcatcaccgccatagcatggagtctggaggag
aaactcctggtggtgggcacccaggatggcgccatggtcgtgtgggatgtggaggaacag
caggtggtccacattctaatgggacacacagctgaagtgaggtgtgtgcgagtgtttgcc
caagggactcttgccatctctgcatcaaaggaccataccctgcgtctgtggagtctgctc
tctggccaggagaaagtcaccattttggatggagggtcaccaaatcccacagagctccag
agttgggaccttcatgtggatgagataaacaatgttgtatactcgacatctggtgcaagg
atccatgtgtggaatctggaaacttcgaagctggttttctgtatcacaggagatgtgtct
gatccctgggtctgtgtggctttgttggctgcccagggtttgctgcttgccctgtccaag
ggcggccaggtcagtctgtggagctcagccacgggaaaactgcaggagaaacaccagttg
tccagtatcaaagaagagacacccacctgtgccgtctccaccccgacccgggcaaggctg
gtcgctggcttcagcagtggctccatcgccctggtctccactggagaagacaggctgctg
gagaagctcccagaagctgtggggttcctggtggtttctgaagacgactcccttcttgtg
gcaggctttggaagatttgtgcggattttcttggctgactcgcaaggcttccaccggttc
atggcttcggatctggagcacgaggacatggtggagacggcagtcttgggtcctgagaac
aatctcatcatcacagggtcccaggatgcacttatccaggtgtggagtctgtcagaacag
gggaccctgctgaatgtccttgagggcgtgggcgcccctgtgagcctgctggtccggagt
gggactttggtggtgtctgcatcccggaagtcttcgtctttcaaggtctgggatctcaag
tccactcagaagctgcagtctccgactccatttctggaccgcaccggcctcgctgcagtg
tcccaccatggcagctatgtctacttccctaaggttggggacaaaaacaaagtcacaatt
tgggacttggcagaaggtgaggagcaggattgcctggacacgtccaatgagattcgctgt
ctggaggtggcagagcaggccaagctcctcttcacaggcctggtttctgggatcgtgctt
gtgttccccctgaattccaggcaagatgtgctgtgcatccccccacctgaggcacgcaaa
gctgtcaactgcatgtccctgagcaagaatgaggatcgtctggccattgcctatgacaac
attgtcctggtgcttgacgtaagccctggggacccatgtcctgccattgaaggccccatc
tacaccttttatacccagctgccggagaccataatgagtgtggctgtcctggctgactat
cgtgtggtctacggcatgagcgatggcagcctcttcctgtatgactgtgcatggtctaaa
gtgttccctctggaggcccatgggagcagggtgagctgtgtggaggtcagccacggtgag
cagctagcagtgagcggggctgaagatgcactgctgtgtctctgggacctgcaggcttgc
agggggatgttcacgatgagctatgagagctcctgctacagaggggtgcggtgtgcctgc
ttctccagggatgacaagcatgtatttgcgggcatggaggaccgctctgtcaccgcctgg
agcacggtggacggcactcttttggctgtccagtttgttcatgctgtgatcaaccgaatc
atccctacctccaacggcttcatggcccccacaagccatggctatctcatccgtgagcgc
ttccagtgcccgtcagtcagagcctcccagcaagaccctctcaagaacttcaagaaggca
gtgtggctggtaaagaccaggcagagggaagaactggctgcagcagaggccccccaggac
gcagaaccagtggccgtagagggaaaggaatcaaagtcaaataaacgctcacaggtctgc
ctcatactctga
DBGET
integrated database retrieval system
