Mus pahari (shrew mouse): 110336792
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Entry
110336792 CDS
T05929
Symbol
Npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110336792 (Npas1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110336792 (Npas1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
110336792
NCBI-ProteinID:
XP_021075187
Ensembl:
MGP_PahariEiJ_G0021091
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All DBs
Position
19:complement(11873054..11894624)
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AA seq
595 aa
AA seq
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MATPYPRSGGRGEVKCGGGRGAGVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARWRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGPPAGLA
PGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAASTGPPTPPSVSSSSSSSSSSSLVDTPEIEANPAEASP
AFRAQERSFFVRMKSTLTKRGLNVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAEL
PLHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDATRIRQSHLDLL
DKGQVVTGYYRWLQRAGGFVWLQSVATVAGNGKSTGEHHVLWVSHVLSNAEGSQTPLDVF
QLPAIVSQEEPSSPGPEPTEEEPPVDGKQAMPVDQDKDKDPQARGKRIKVEASPKEARGS
EDSGEEELSDPPAPPRPEFTSVIRAGALKHDPVLPWGLTTPGDPSPALLHAGFLPPVVRG
LCTPGTIRYGPAELSLMYPHLHRLGPGPSLPEAFYPTLGLPYPGPTGTRVQRKGD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccctatcccagaagcgggggccgaggtgaagtcaagtgcgggggcggccgt
ggagctggcgtcccctgggatttcctgcctgggctgatggtcaaggccccgcccggaccc
tgcctgcaggcacagcgcaaagagaagtcccgcaacgctgcgcgctggcggcgcgggaag
gaaaatctggagttcttcgagctggccaagctgctccctctgcccggtgccatctccagc
cagctggacaaggcatccatcgtgcgtcttagcgtcacctacctccgcctgcgtcgtttt
gccgcgctgggggcgccgccctgggggttgcgggccgtcgggcctccggctggcctcgcc
ccaggccgccgaggccctgtggctctggtctctgaagtcttcgagcaacacctgggtgga
cacatactacagtccttggatggcttcgtgttcgctttgaaccaggaagggaaatttctc
tacatctcagagacagtgtccatctacttgggtctctcccaggtggagctgacgggcagc
agcgtcttcgactacatccaccctggggaccactcagaggtcctagagcaacttggattg
cgggctgcaagcactggcccccctacgccgccttccgtgtcctcctcttcctcctcctcc
tcttcctcctcgctggtggacacccccgagattgaagccaaccccgccgaggcatcccct
gccttccgagcccaagagcggtccttctttgtccgcatgaagtccaccctcaccaagagg
ggcctgaatgtcaaagcctcggggtacaaggtcattcatgtgacagggcgcctgagggcc
cgagccctgggtcttgtagcccttggacacacactgcccccagccccactggctgagctg
cctctacacggacacatgattgtcttccgcctcagcctgggtctcaccatccttgcttgt
gagagcagagttagcgaccatatggacatggggccctcagagctggtgggacgcagctgc
taccagtttgtccatggacaggatgcaaccaggatccgccaaagccatctggacctgctg
gacaaagggcaggtggtgactggttactaccgttggctgcagcgtgcggggggcttcgtg
tggctgcagtctgtagccactgtggccgggaacgggaagagcactggggagcatcacgtg
ctatgggtcagtcacgtgctcagcaatgccgaaggcagtcaaacacccctggatgtcttc
cagcttccagccattgtgtctcaggaggagccatccagcccgggtccagagcccacagag
gaagagcctccagttgacgggaagcaggctatgcctgtggaccaggacaaggacaaggac
cctcaggcccgaggcaaacgcatcaaagtggaggccagcccgaaggaagctagaggctca
gaggacagtggagaggaggagctctcagatccaccggctccacctcggccagaattcact
tctgtcatccgggcgggggccctgaagcatgatccagtactgccgtggggcttgacaact
cccggagacccctcacccgccctccttcatgcaggcttcctgccacccgtcgtgcggggc
ctgtgcaccccaggcaccatccgctatggccctgcggagttgagcctgatgtatccacat
ctgcacaggctgggcccaggcccctcgcttccagaggccttttaccctacgctgggcctg
ccctacccggggcccacaggtactagggtgcagcggaagggagactga
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