Mus pahari (shrew mouse): 110336814
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Entry
110336814 CDS
T05929
Name
(RefSeq) tripartite motif-containing protein 60
KO
K12029
tripartite motif-containing protein 60/61
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110336814
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110336814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
Baculo_IE-1
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
ANCHR-like_BBOX
Hanta_Gn-B
YgaB
Motif
Other DBs
NCBI-GeneID:
110336814
NCBI-ProteinID:
XP_021075221
Ensembl:
MGP_PahariEiJ_G0021555
LinkDB
All DBs
Position
19:complement(79860024..79876325)
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AA seq
464 aa
AA seq
DB search
MDSTALKTLQDKCICHICSDFMEDPVTSKCGHNFCYACLSLLWDDLKGSVFCPVCQTPFP
QKSFSRNYQFRNMTEIIRLLQKSKRKRQEEHTVCQKHDQPLVLFCVRDRDVLCTQCSLSV
EHQGHYTCPIKKASSYHKKILGKAIATLKFSVKQVEEKLALQHRRVLGLREEAEYQKKEI
SYEFGLIKLFLQSELEAHLNEIHIEELVSSSELNGYLETLFDHVSTAKDLLKEVEATHES
SDVTFLRAYHRLQNLKSPKPWLFRTKQYCLSLPPQYSGLNRIIKQFQTDVTFDLDTAHPQ
LVISEDRKSVFYEEARQCVCASPQKFHLWPALLGCNGFDSDRQYWEVKVGDKPRWTLGVC
QAHFSGDWSNQPSGFWAIGRYAENSYVTYGPIRTEFLPVVRPSKVGIFLDYELGELSFYN
MSDRSLLYIFRNSFTGTLWPYFYTGTDSESLEILTHPTPDTGSY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggactccacagccctaaaaaccttgcaggacaagtgtatctgtcacatttgttcggat
ttcatggaagacccagtgaccagtaagtgtgggcacaacttctgttatgcctgcctcagt
ttgctctgggatgacctaaaaggcagcgtcttctgccctgtctgtcagactcccttccca
cagaaaagcttcagcaggaactaccagttccgtaacatgactgaaatcattaggctgctg
cagaagagcaagaggaagagacaggaagaacacacagtgtgtcagaagcatgatcagcct
ctggtcttgttctgtgtgagggatcgggatgtcttatgtacccagtgtagcctctctgtc
gaacaccagggccattatacctgccccattaagaaagccagctcttatcacaagaaaatc
ctagggaaagccattgcaactttaaagttcagcgtgaaacaagttgaagaaaagcttgcc
ctgcagcacagaagagttcttggactgagggaggaggctgaataccaaaaaaaagagata
agttatgaatttgggctaatcaaactgttcctgcaaagtgagcttgaggcgcatctaaat
gagatacacatcgaggagctggtgagttcctcagaactgaatggatatcttgagaccctg
ttcgaccatgtttccacagcaaaagatctgttgaaggaagtggaggccacacatgaaagt
tcagatgtcacattcctcagagcctaccacaggttgcaaaaccttaagtcccccaaaccg
tggttattcaggacaaagcaatattgcctcagtctcccaccacagtattcaggcttgaac
agaatcatcaagcaatttcaaacagatgtgacttttgatcttgacacagcacaccctcag
cttgttatttctgaggatagaaaatctgtgttttatgaagaagcccggcaatgtgtgtgt
gctagccctcagaaatttcacctctggcccgctcttctgggatgtaatggattcgattct
gatcgacagtactgggaagtcaaagtgggagacaagcccagatggacactgggtgtgtgt
caagcccacttttctggggactggagcaatcagccctctggtttctgggcaattggacgg
tacgctgagaatagctatgtcacctatggacctataagaacggagtttctgccagtggtg
cgacccagcaaggtcggcatatttttggattatgaattgggtgagctctccttctataat
atgagtgataggtcccttctctacattttcaggaattcttttaccggcaccctttggcct
tatttctatacaggaacagattctgaatctctggaaatcttaacccaccccacaccagac
acagggtcttactaa
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