Mus pahari (shrew mouse): 110336865
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Entry
110336865 CDS
T05929
Symbol
Ssc5d
Name
(RefSeq) soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
KO
K25740
soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
110336865 (Ssc5d)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
110336865
NCBI-ProteinID:
XP_021075267
Ensembl:
MGP_PahariEiJ_G0021005
LinkDB
All DBs
Position
19:1866485..1886984
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AA seq
1352 aa
AA seq
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MRGLACLLAMLVGIQAIERLRLADGPHGCAGRLEVWYSGRWGTVCDDGWDLRDAAVACRV
LGCGGALAAPGGAFFGEGTGPVWLSELNCRGNEGQLGICPHRGWKAHICSHEEDAGVVCV
GQRAANSREDSMSLLDGDPWLALSGELSPSSEEPPITHAPQPAASSQNGPRKKNPRPPKQ
TKSTRAPVLTNGAPHQERLRLVSGPHGCAGRLEVWHGGRWGTVCDDGWDLRDAAVACREL
GCGGALAAPGGARFGPGEGPVWMDDVGCGGGEEALRDCPRSPWGRSNCDHTEDAGLVCTG
PAPRLRLADGPHGCAGRLEVWHGGRWGSVCDDAWDLRDAAVACRELGCGGALAAPGGAFF
GEGAGPIILDDLRCRGNETALRFCPARPWGQHDCHHREDAGAVCDGSPQLRLVAGPSRCS
GRLEVWHDGRWGTVCDDSWDMRDSAVVCRELGCGGPRQPDPAAGRFGWGAGPIWLDDVGC
VGTEASLSECPAASWGKHNCAHNEDVGVTCTGTPGLDTISDPFSWSWLPGLGRDQDAWLP
GELTTKASAGLTSSVPQKPTKAPGKAPKSTKKWVTKNAKRPTTQPPGMPTTKRSRVPGTP
TSLNPTPRTPESPRRLTTEAPHRQSSHTTERLTPRVPWEWTSEPVVSLSTQGPQKVTSEA
TTTPTPQTSLEPSGENPEGSLESSQDPAATPTAGVPVPAGPFRVRLADGPNRCAGRLEVW
HAGLWGTVCDDSWDLRDATVACWELGCGKVRPRVGKTHYGPGTGPIWLDDMGCKGSETSL
SDCPSGAWGKHNCDHEEDVVLTCTGYTDDDDYPSWTLDPTSGEDLTKGTTVAARPGHTLS
WATATNTGVHSPATQSLPDTDDGGGYEFSWTWDTPSGRGLSKGTPTTTKPGSTVITSTRK
SPGHPFPAPRARADTGSPRKAKPERRPLPTSARTAPTTSPPASSTSPEPSGSRQTSGSWP
QLIPDSASKQEGTSSPPKPSPLTPGLPSPASFALSTPDARLLPTPSPELSVSPTPTSPEG
LTSDSSVLSEVSSRSPTSELTPGSDTTPAPEITPESSDSSDLPMNPRTPTQPFTAPHPTT
IPQLNTTSYPTMAPQLTTNPQQPRSPHPTTSPQSPTNTQPSSTPAAPTESPPSPGETEFS
SPTSQPRVKASLTPELTFEEAPSTDTSQMQNLELLLASKSGPSRPSPASNMNPLSTDAFK
PPRSQTLYSASDPMVTPDLPISSVAHPSGQPSPDHLTQEPTPNHNPGPFGPCVSPVPPVR
VMACEPPALVELVGAVRQVGDQLQRLTWVLEQDRQERQVLALGLAQLVEAAQGLGQLSET
VKRLAEVAWPPSTPVPTTITTEEEERPLRGDV
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcttggcctgcctccttgcaatgctggtggggatccaggctatagagcgactc
cgcctggctgatggtcctcatggctgcgcaggacgcctggaggtctggtacagcgggcgc
tggggcaccgtgtgtgatgacggatgggaccttcgggatgctgcggtggcctgccgtgtg
ttaggctgcggaggggcgctggccgcccctgggggtgccttcttcggggagggcactggg
cccgtgtggctcagtgaactgaactgtcggggcaatgagggacagctgggtatctgtccc
caccggggctggaaggcccatatctgctctcatgaggaggatgcaggcgtcgtctgtgta
ggtcagcgtgcagctaactctagagaagactcaatgtccctgctggatggggatccatgg
ctggcactgtctggggagctgagccccagctcagaggagccgcctataactcacgctccc
caaccagcagcaagctcccagaatggcccccggaagaagaacccccggccacctaagcag
accaagtccacccgagcccctgtactgacaaatggagctccccaccaagagcggctgcgg
ctggtctcaggtccccatggatgtgccggccgcctggaagtctggcacggtggacgttgg
ggcacggtctgcgatgatggatgggacctccgagatgcagcagtggcctgcagggagctg
ggatgtgggggagccctggccgcccctgggggtgccagattcggacctggtgagggacct
gtgtggatggacgatgtggggtgtggaggaggagaggaggccctccgggactgtccccga
agcccctggggccggagcaactgtgaccacaccgaggatgcagggctggtctgcaccggt
cctgcgcccaggctacgccttgctgatggtccccacggctgtgccggccgcctggaggtg
tggcatggtggacgatgggggtcggtgtgtgatgatgcctgggatcttcgcgatgctgct
gtggcctgcagggagctgggctgtgggggtgccctggccgccccagggggtgccttcttt
ggagagggggctgggcccatcatcctggatgatctcagatgtcgaggaaatgagacagcc
ttgcgattctgtcctgcgaggccctggggtcagcacgactgtcaccatcgggaggatgct
ggggccgtgtgtgatgggtccccccagttgcgcctggtggctggacccagcaggtgctct
ggccggctggaggtatggcatgacggacgttgggggacagtatgtgatgacagctgggac
atgagagactcagctgtggtctgccgggagctgggctgtggggggcctcggcaaccggac
cccgcagcaggacgctttggctggggtgcaggccccatctggctggatgacgtaggttgt
gtggggacggaggcttcactgtcagaatgccctgctgcttcctgggggaaacacaattgc
gcccacaatgaggatgtcggggttacctgcactgggacccccggcctggataccatctca
gaccccttcagttggagctggctccctgggctgggcagggatcaggacgcctggctcccg
ggagagctaaccaccaaagcttctgccggtctcacctccagtgtgcctcagaagcccaca
aaggctccagggaaagcacccaagagtaccaagaaatgggtgactaaaaatgcaaagaga
ccaaccactcagccccctgggatgccaaccaccaaacgttccagggtcccaggcacccca
acctccctcaatccaaccccacgtacccctgagtcaccaaggagactgaccaccgaggct
ccccacaggcagtcctcacataccactgaaaggctgacccctagggtcccctgggagtgg
acctcagagcctgtggtgtcactgtccactcaaggaccccaaaaagtgacctctgaggct
accacaacgccaacccctcagacctccttggagccatctggtgagaacccagaaggttct
ctggaatcatcccaagatccagctgccaccccaactgctggagtccccgtgccagcaggt
cccttccgggttcgtctggctgatgggcccaacaggtgtgccggccggctagaggtgtgg
catgccggactctggggaacagtctgtgatgacagctgggacctccgggatgccacagtg
gcctgctgggagctgggttgcggaaaggtccggccccgagtaggcaaaacccactatggc
cctggcaccgggcccatctggttggatgacatgggctgtaagggaagtgagacatcactg
agtgactgcccctcgggggcgtgggggaagcacaactgtgaccacgaagaagacgtggtg
ctcacctgtactggatacacggatgatgacgattatccttcctggaccttggaccccact
tccggagaggacctgaccaaagggaccacagtggctgcgcggcctggacatacactttcc
tgggctaccgctacaaacactggagtccactctccagcaacacagagccttccagacaca
gatgacgggggtggttacgagttctcctggacgtgggatacaccttcaggaaggggtctg
tccaaagggacccccaccacaaccaagcctggatccacagttatcactagcaccagaaag
agtccaggccacccctttccagctccaagggcccgtgcagacacaggttccccaaggaag
gcaaaacctgagcgccggccgctgcccacctcagccaggacagcacccaccacctcaccc
cctgcttcctccacttcaccggagccttctggctcacggcagacctctggctcctggcca
caactcatcccagactcggcttcaaagcaggaggggacctctagcccccccaaaccatct
ccactcaccccaggacttccctccccagcgagctttgccttgtccactcctgatgcccgt
ttgctcccaacgccttccccagagctttcagtcagcccaacgcccacctcccctgaaggg
ctaacctctgactcctctgtgctctcggaagtgagcagccgttctcctacctcagagctg
actccaggatctgacacaacaccagcacctgaaataaccccagaaagttctgactcctca
gacctccccatgaaccccaggacccccacacagccattcacagcccctcaccctaccacc
atccctcaactcaacacaacttcctaccccaccatggcccctcaacttaccacaaaccct
cagcaacccaggagccctcaccccaccacaagtcctcaatcccccaccaacactcagcct
tcttcaacccctgctgcccctacagagtcccctccatcccctggagagacagaattttcc
tctcccacttcacaaccgagggtcaaggctagcctaaccccagagctgacctttgaggaa
gccccgtccacagacacatcccagatgcagaacctggaactcttgctagcctcgaagtct
ggcccctccaggccctctccagcctcaaacatgaacccactgtccacagatgccttcaaa
ccacccagaagccagaccttatactccgcttcagaccccatggtgacccccgaccttccc
atctcctctgtggcccatccatcgggccaaccttccccagaccacctcactcaagagcca
acccctaatcacaacccaggtccctttggaccatgtgtgtccccagttccacctgtaagg
gtcatggcttgtgagccgcctgccttggtggagctggtgggtgctgtgaggcaggtgggt
gaccagctgcagagactgacctgggtcctggagcaggaccggcaggagcgccaagtcctg
gcgctgggtctagcccagttggtagaggctgcccaggggttggggcagctgagtgagact
gtaaagaggctagcagaggtggcctggccccccagcacacctgtgcccacgaccatcacc
acagaggaggaggagaggcctctgaggggagatgtgtga
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