Mus pahari (shrew mouse): 110337190
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Entry
110337190 CDS
T05929
Symbol
Smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110337190 (Smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110337190 (Smarca5)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110337190 (Smarca5)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
110337190 (Smarca5)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
110337190 (Smarca5)
RSF complex
110337190 (Smarca5)
WICH complex
110337190 (Smarca5)
B-WICH complex
110337190 (Smarca5)
NORC complex
110337190 (Smarca5)
BRF complex
110337190 (Smarca5)
NuRF complex (fruit fly)
110337190 (Smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
110337190
NCBI-ProteinID:
XP_021075610
Ensembl:
MGP_PahariEiJ_G0022862
LinkDB
All DBs
Position
20:complement(5322743..5361251)
Genome browser
AA seq
1051 aa
AA seq
DB search
MSSAVEPPPPPPPESAPSKPSAAGAGGSSSGNKGGPEGGAAPAAPCAAGSGPADTEMEEV
FDDGSPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMK
PGRPRVKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLR
DYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTL
HNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFN
WRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNS
ADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQR
EWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTN
SGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDS
INAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKT
VRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHV
FASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYRE
KQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRL
FELLEKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQG
FTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIM
AQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHK
LGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKA
EKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggtcgagcctccgccgcccccgcctcccgagagcgcgccttccaagccc
tcggcggcgggcgccggcgggagcagcagcggcaacaaaggcggccccgagggcggcgcg
gcgcccgcggctccgtgtgctgcgggctcgggccccgcggacaccgagatggaggaagta
tttgatgatggatcacctggaaagcaaaaagaaattcaagaaccagatcctacatatgaa
gaaaaaatgcaaactgaccgagcaaatagatttgagtatttattaaagcagacagagctg
ttcgcacatttcattcagcccgctgctcagaagactccaacctcacccttgaagatgaaa
ccagggcgcccacgggtaaaaaaggatgaaaaacagaatttgctttcagttggagattac
cgacaccgtagaacagagcaggaggaggatgaagagctattaacagaaagttccaaagca
actaatgtttgtactcggtttgaagattctccatcatatgtaaaatggggtaaactgaga
gattatcaggtccgaggattgaattggctcatctctctgtatgagaatggcatcaatggt
atccttgcagatgaaatgggtttgggaaagacacttcaaacaatttctcttcttggatac
atgaaacactatagaaatattcctggtcctcatatggttttggttcccaagtctacattg
cacaactggatgagtgaattcaagagatgggtaccgacacttaggtctgtttgcttgata
ggagataaagagcaaagagctgcatttgtcagggatgttttattaccaggagagtgggat
gtgtgtgtcacatcttatgaaatgcttattaaagagaagtctgtgttcaaaaaattcaac
tggagatacttagttatagatgaagctcacaggataaaaaatgaaaaatctaagttgtcc
gaaatagtgagagaattcaagactacaaatcggctgttgctaacagggacacctcttcag
aacaacctgcacgagctctggtcacttctaaactttttgttaccagatgtgtttaattca
gctgatgactttgattcctggtttgatacaaataattgccttggggatcaaaagctagtt
gagaggcttcatatggttttgcgtccattcctccttcgtcgaattaaagctgatgttgaa
aagagtttgcctccaaagaaagaagtaaaaatctatgtgggtcttagcaaaatgcaaaga
gaatggtatactcggatattaatgaaagatatagacatattaaactcagcagggaagatg
gacaaaatgaggctattgaacattttgatgcagttgaggaaatgctgcaatcatccatat
ctcttcgatggagctgaacctggtccaccgtacacaacagatatgcatctagttaccaac
agtggcaagatggtggtattagacaaactactccctaaactgaaagaacaaggttcaaga
gtactaatcttcagtcagatgacaagggtattagatattttggaagattattgcatgtgg
agaaattatgagtactgcaggctggatggacagacaccccatgatgagagacaagactcc
atcaatgcctacaacgaaccaaatagcacaaagtttgtatttatgctaagcacacgtgct
ggtggtctgggcatcaatcttgcaactgctgatgtagtaattttatatgattcagattgg
aatcctcaagttgatcttcaggctatggaccgtgcccatagaattggacaaacgaagact
gtccgagtgtttcgctttataactgataatactgtggaagaaaggatagtggaacgtgcc
gagatgaaactcagactggattcaatagtaattcaacaagggaggcttgtagatcagaac
ctgaacaaaattgggaaagatgaaatgcttcaaatgattcgacacggtgccacacatgtg
tttgcttcaaaagaaagtgaaatcactgatgaggatattgatggtattttggaaagaggt
gcaaagaagactgcagaaatgaatgaaaagctctccaagatgggtgaaagctcacttaga
aactttacgatggatacagagtccagtgtttataactttgaaggagaagactatagagaa
aagcaaaagattgcattcacagagtggattgaaccaccaaaaagagaaagaaaagccaac
tatgctgttgatgcatatttcagggaagctctccgtgttagtgagcctaaagcacccaag
gcacctcgacctccaaaacaaccaaatgttcaggatttccagttctttcctccacgttta
tttgaattactggaaaaagaaattctgtattacaggaaaactattgggtataaggtacct
cggagtcctgatctacctaatgcagcacaggcacagaaagaagaacagctaaaaatcgat
gaagcagagcctcttaatgacgaggagttagaggaaaaagagaagcttctgacacagggg
tttacaaattggaataagagagattttaaccagtttatcaaggctaacgagaagtggggt
cgtgatgatattgaaaatatagccagagaagtagaaggaaaaactccagaagaagtcatt
gagtactcagctgtgttctgggaaagatgcaatgagcttcaggacatagagaagattatg
gctcagattgaaaggggagaggcaagaattcaaagaagaataagtatcaagaaagcacta
gatacaaagatcggacggtacaaagcaccctttcatcagttaagaatatcatatggtact
aacaaaggaaaaaactatactgaagaagaggatcgctttctcatttgtatgttgcacaag
cttggcttcgacaaggaaaacgtgtatgatgagttacgacaatgcatccgaaactcccct
cagtttagatttgattggtttctcaagtccagaactgcgatggagctccagaggaggtgt
aataccttaattactttgattgaaagagaaaatatggaactagaagaaaaggagaaggca
gagaaaaagaaaagagggccaaaaccttctacacagaaacgtaagatggacggcgcccct
gatggccgtggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
