Mus pahari (shrew mouse): 110337232
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Entry
110337232 CDS
T05929
Symbol
Vps4a
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03250
Viral life cycle - HIV-1
mpah03272
Virion - Hepatitis viruses
mpah04144
Endocytosis
mpah04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110337232 (Vps4a)
03272 Virion - Hepatitis viruses
110337232 (Vps4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110337232 (Vps4a)
09143 Cell growth and death
04217 Necroptosis
110337232 (Vps4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110337232 (Vps4a)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110337232 (Vps4a)
Membrane trafficking [BR:
mpah04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
110337232 (Vps4a)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
Check point factors
Other check point factors
110337232 (Vps4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
TIP49
AAA_16
AAA_22
AAA_14
AAA_5
RuvB_N
IstB_IS21
AAA_25
DUF815
AAA_17
AAA_2
AAA_18
NPHP3_N
AAA_33
RNA_helicase
nSTAND3
AAA_24
PhoH
ResIII
AAA_28
Mg_chelatase
AAA_7
NACHT
Parvo_NS1
YhdB
bpMoxR
AAA_30
TPR_2
Motif
Other DBs
NCBI-GeneID:
110337232
NCBI-ProteinID:
XP_021075670
Ensembl:
MGP_PahariEiJ_G0023127
LinkDB
All DBs
Position
20:30432598..30446081
Genome browser
AA seq
437 aa
AA seq
DB search
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
MQYLDRAEKLKDYLRNKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCG
PSRTNPNVMIDDLLTPCSPGDPGATEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNA
DDLLKVKKFSEDFGQES
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcaaccctccagaaagccatcgatctggtgacaaaagccacagaagaggac
aaagccaagaactacgaggaggcactccgtctctaccagcatgctgtggagtatttcctc
cacgccatcaaatatgaagcacacagtgacaaggccaaggagagcattcgagcaaagtgc
atgcagtacctagacagagctgagaagttgaaggactatttacgaaacaaagagaaacat
ggcaagaagccagtcaaagagaaccagagtgaaggcaagggtagtgacagtgacagcgaa
ggggataacccagagaaaaagaaattacaagaacaattgatgggtgctgttgtgatggaa
aagcctaacatacggtggaatgatgtagctgggctggagggggctaaagaggctctcaaa
gaagctgtgattttgccaattaaattcccacacttattcacaggcaaacgcactccttgg
cggggtatactgctctttgggcccccaggcacaggcaagtcctacctggccaaagccgta
gcaacagaagccaacaactccaccttcttctctgtgtcctcctcggatctgatgtctaag
tggttgggggaaagtgagaagctagtcaagaacctgtttgagctggccaggcagcataag
ccttcgatcatcttcattgatgaggtggattccctctgtgggtcacggaatgaaaatgaa
agtgaagctgcccgcaggatcaaaacagagttcttggtccagatgcaaggagtggggaat
aataatgatgggactcttgttcttggtgccacaaacatcccctgggtgttggactcagcc
atcaggaggaggtttgaaaagcgaatttatatcccattgccagaggaagcagcccgtgcc
cagatgtttcggttacatctgggaagcacaccccacaacctcacagatgctaacattcac
gagctggcccgcaagacagaaggctactcaggagcagatatcagcatcattgtgcgggac
tccctcatgcagccagtcagaaaagtacagtcagcaacacacttcaagaaggtttgtggc
ccttctcgaaccaaccctaatgtgatgattgatgatcttctgaccccgtgttctccagga
gacccaggggccacagagatgacttggatggatgtccctggtgataaactcttagagcct
gtggtttgcatgtcggacatgctccggtctttggccactacccggcccacagtgaatgca
gatgacctcctgaaagtaaagaaattctctgaggactttgggcaggagagctaa
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