Mus pahari (shrew mouse): 110337273
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Entry
110337273 CDS
T05929
Symbol
Rfx1
Name
(RefSeq) MHC class II regulatory factor RFX1
KO
K09173
regulatory factor X 1/2/3
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110337273 (Rfx1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Other basic domains
RF-X
110337273 (Rfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
110337273
NCBI-ProteinID:
XP_021075745
Ensembl:
MGP_PahariEiJ_G0022897
LinkDB
All DBs
Position
20:8536845..8567075
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AA seq
963 aa
AA seq
DB search
MATQSYVTELQAAPQASQPPQAPPQALPQPPPPAAPQPPAAATPQPQYVSELQSPQPQTQ
PPGSQKQYVAELPAAPAPSQPATPAPSPVAQQYIVVTVSEGAMRASETVSEASPSSTASQ
TGVPTQVVQQVQGTQQRLLVQASVQAKPGHVSPLQLTNIQVPQQAIPTQHLVVQSPALGT
KNGQVSLTVHSAQQVHSAPERSPVQANNSTSKTTGTPAATXQQLQVHSVQQSVPVTQERS
VVQATPQTKAGPVQQLTVQGLQPVHVAQEVQQLPQVPVPHVYSSQVQYVEGGDASYTASA
IRPSTYQYPETPIYTQTAGTSYYEASGTAAQVNTPATSQTVASSGSVPMYVSGSPIVASS
SSSEAGASNSSVGAAGNGGGGSSGGGSGGSGGSGAGTYVIQGGYMLGNASQSYSHTTRAS
PATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRR
LGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGVANGVAV
GQQSTGLSDISAQXQQYQQFLDASRSLPDFAELDLQGKVLPEGIGPGDIKAFQVLYREHC
EAIVDVMVNLQFXLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPRASLVLLSKFQPV
LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV
KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC
EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSSGFPKAAKLFLLKWSFY
SSMVIRDLTLXSAASFGSFHLIRLLYDEXMYYLIEHRVAQAKGETPIAVMGEFANLATSL
NPLDPDKDEEEEEEEESEDELPQDISLAAGSESPALGPEALEPPAKLARTDTRGLFVQAL
PSS
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacagtcctatgttactgagctacaggcagccccacaagcatcccagccgcca
caggccccaccccaggccctgccccagccaccacccccagcagcaccccagcctcctgct
gcagcaaccccccagccccagtatgtcagcgagctgcaaagcccccagccccagacgcag
cctccgggcagccagaagcagtatgtggcagagctcccggctgcccccgcaccctcccag
cctgccacacctgccccgtcccctgtggctcagcagtatatcgtggtcaccgtatcggaa
ggtgccatgcgggctagtgagactgtgtcagaagccagccccagttccacggcaagccag
actggtgttcccacccaagtggtccagcaggtgcagggcacccagcagcggctgctggtc
caggcaagtgtgcaggccaagccaggccatgtgtcccccctgcagcttaccaacatccag
gtgccacagcaggctatccccacacagcacctggtggtgcagagcccagcactgggcact
aagaatggccaggtctccctgacggtgcacagcgcccagcaggtgcactctgctcctgag
aggtcaccagtgcaggccaacaactccaccagcaagacaactgggactcctgcggccact
ntgcagcaactacaggtccacagcgtccagcagagtgtccctgtcacccaagagaggtca
gtagtccaggccactccacagaccaaagctggcccggtgcagcagctgactgtgcaggga
ctacagccagttcacgttgctcaagaggtacagcaactccctcaggtgcctgtcccacat
gtgtactccagccaggtgcagtatgtggaaggtggtgacgccagctacacagccagcgcc
atccgccctagcacctaccagtaccctgagacacctatctacacgcagacggcaggcacc
agctactatgaggcttcaggcacagctgcccaggtcaacacgccggctacttcccagacg
gtggccagcagcggctcagtgcccatgtatgtgtccggcagcccaattgtcgccagctca
tccagcagcgaggctggggccagcaacagcagtgtgggcgcagcgggcaacgggggaggc
ggcagcagtggcggcggcagtggcggcagtggcggcagtggagcaggcacctacgtgatc
caaggcggctacatgctaggcaatgccagccagtcttactcccacaccacccgtgcctca
ccagccacagtccagtggctcctggataattacgagaccgctgagggcgtgagtctgcca
aggagcaccctctactgccactacctgctgcactgccaagagcagaagctggagccagtt
aatgccgcctctttcggcaagctcatccgctcggtattcatgggtctgcgcacgcgccgc
ctgggcaccaggggcaactctaagtaccactattatggcctgcggatcaaagccagctca
cccctgctgcggctgatggaggaccagcagcacatggccatgcggggncagcccttctcc
cagaaacagaggctcaagcccatccagaagatggagggcgtggccaacggtgttgcngtg
gggcagcagagcacagggctgtcagacatcagcgcccagntgcagcagtaccagcagttc
ctggatgcctccaggagcctgcctgattttgctgagctggacctccagggcaaagtgctg
cccgagggcatcggtcctggggacatcaaggccttccaggtcctgtaccgggagcactgt
gaggccatcgtggacgtcatggtaaacctgcagttcanactggtagaaacgctgtggaag
accttctggagatacaaccttagccagcccagtgaggctccaccactggccgtgcatgat
gaggcagagaagcggctgcccagggccagtctggtgctcctctccaagttccagcctgtg
ctccagtggaccaagcactgtgacaacgtgctgtaccagggcctggtggagatcctcatc
cctgatgtgcttcggcccatccccagtgccttgacccaagcaatccggaactttgctaag
agcctggagagctggctcacccatgccatggtgaacatccctgaggagatgctgcgggtg
aaggtggcagcagctggcgccttcgcacagacgctacggcgctacacatcactcaaccac
ttggcgcaggcagcgcgggcagtgctgcagaacactgcgcagatcaaccagatgctaagc
gacctcaatcgcgtggacttcgcaaatgtccaggagcaggcctcgtgggtgtgccgctgc
gaggaccgtgtggtgcagcgtttggagcaggacttcaaggtgacgctgcagcagcagaac
tcactggagcaatgggcagcctggctggacggcgttgtgagccaggtgctcaagccctac
cagggcagttccggcttccccaaggcggccaagctcttcctcctcaagtggtccttctac
agctccatggtgatccgggacctgaccctgcncagtgctgccagcttcggctccttccac
ctcatccggctgctctatgacgagtncatgtactacctgatcgagcacagagtggcccag
gccaagggcgagaccccaatcgcagtcatgggagagtttgcgaatctggccacctcgctg
aatcccctggaccctgacaaagatgaggaagaggaggaggaagaggagagtgaggatgag
ttgccacaagacatctcgctggcggccggcagcgagtctcccgcactaggcccagaagct
ctggagccaccagcgaaactggcgcggactgacactcgaggcctctttgtgcaggccctg
ccctccagctaa
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