Mus pahari (shrew mouse): 110337329
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Entry
110337329 CDS
T05929
Symbol
Amfr
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04137
Mitophagy - animal
mpah04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110337329 (Amfr)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110337329 (Amfr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110337329 (Amfr)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
110337329 (Amfr)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110337329 (Amfr)
Multi subunit Ring-finger type E3
ERAD complex
110337329 (Amfr)
LMBR1L-GP78-UBAC2 complex
110337329 (Amfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
110337329
NCBI-ProteinID:
XP_021075854
Ensembl:
MGP_PahariEiJ_G0022986
LinkDB
All DBs
Position
20:complement(18168241..18192742)
Genome browser
AA seq
548 aa
AA seq
DB search
MLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLLSCCGLAVVCCVTGHTHGMHT
LAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADGSRAREDHQ
GENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNS
QLNAMAHQIQEMFPQVPYHLVLQDLQMTRSVEITTDNILEGRIQVPFPTQRSDSLRPALD
SPVERPSTDLEEGEASAQTERVPLALSPRLEETLDFSEVELEPIEVEDFEARGSRFSKSA
DERQRMLVQRKDDLLQQARKRFLNKSSEDDGASERLLPSEGTSSDPVTLRRRMLAAAAER
RLQRQRTT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggctaagcttatccagtgtattgtgtttggccctcttcgagtgagtgaaaga
cagcatctcaaagacaaattttggaattttattttctacaagttcattttcatctttgga
gtgctgaatgtccagactgtggaggaggtggtgatgtggtgcctctggtttgccggactt
gttttcctgcatctgatggttcagctctgcaaagacagattcgaatacctttccttttct
cccaccacaccaatgagcagccacgggagagtcctgtccctgctgatagccatgctgctc
tcctgctgtggactggcagttgtctgctgtgtcacaggccacacacatggcatgcacacc
ttggctttcatggctgcagagtctcttcttgtgacggtgaggacagctcatgtgatttta
agatatgtaattcacctctgggacctcaaccatgaagggacatgggaaggaaagggaacc
tatgtgtactacactgactttgtcatggagctcactctcctgtccctggacctcatgcac
catattcacatgctgttatttggcaacatctggttatctatggctagcttggtcatcttt
atgcaacttcgttacctgttccatgaggtacagcgccgaatccgtcgacacaagaactat
ttgcgagtggtaggaaacatggaagccaggtttgctgttgcaactccagaggagctagct
gtcaataatgatgactgtgcaatctgctgggactccatgcaggctgcaaggaaactgccc
tgtggacatctttttcacaactcctgccttcgttcttggctagaacaagacacctcttgt
ccaacgtgcagaatgtctcttaatattgctgatggcagtcgtgccagggaagaccatcaa
ggagagaacttggacgagaacttggttcctgtagcagctgccgaaggcaggcctcgcttg
aaccagcacaatcacttcttccactttgatgggtcccggattgcgagctggctgccaagt
ttttcagttgaagtgatgcacactaccaacattcttggcatcacacaggcaagcaactct
cagctaaatgccatggctcatcagattcaggagatgttccctcaggtcccgtaccacctt
gtgctccaggacctccagatgacacgctccgtggagataacaacagataacatcttagaa
ggacggattcaagtacctttccccacgcagcgctcggatagtctgaggcctgcactggac
agcccagtggagaggcccagcactgacctggaggagggagaagcttctgcccagacggag
cgtgtaccactggccctcagtcctcgcctagaggagaccttggacttcagtgaggtcgaa
ctagagcccatcgaggtggaagactttgaggcccgagggagccgcttctccaagtctgct
gatgagagacagcgcatgttagtccagcggaaggatgacctcctgcagcaggctcgaaag
cggttcttgaacaaaagttctgaagatgacggggcctcagagagactcctcccttctgaa
ggcacatcctctgaccccgtgaccctgcgccgaaggatgctggcagccgctgctgagcgg
agacttcagaggcaacggacaacctag
DBGET
integrated database retrieval system
