Mus pahari (shrew mouse): 110337338
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Entry
110337338 CDS
T05929
Symbol
Tbc1d9
Name
(RefSeq) TBC1 domain family member 9 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110337338 (Tbc1d9)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110337338 (Tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
110337338 (Tbc1d9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
110337338
NCBI-ProteinID:
XP_021075867
Ensembl:
MGP_PahariEiJ_G0022870
LinkDB
All DBs
Position
20:7648891..7753296
Genome browser
AA seq
1264 aa
AA seq
DB search
MWVNPEEVLLANALWITERANPYFILQRRKGHGGDGGGGGGLAGLLVGTLDVVLDSSARV
APYRILYQTPDSLVYWTIACGGSRKEVTEHWEWLEQNLLQTLSIFENENDVTTFVRGKIQ
GIIAEYNKINDVKEDEDTEKFKEAIVKFHRLFGMPEEEKLVNYYSCSYWKGKVPRQGWVY
LSINHLCFSSFLMGREAKLVIRWVDITQLEKNATLLLPDVIKVSTRSSEHFFSVFLNINE
TFKLMEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFR
LPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEENLCSLIIPLREVTIVEKA
DSCSVLPSPLSISTRNRMTFLFANLKDRDFLVQRISDFLQQTTSRIYSDKEFSGSCNSSD
DEVYSRPSSLVSSSPQRSTSSDADGERPFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLA
KEFLKEQAWKIHFAEYGQGICMYRTEKTRELVLKGIPESMRGELWLLLSGAINEKATHPG
YYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYC
QAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQL
YDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDK
LLNCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVGPYPAVDIFRLIGTSYEK
FGTIRADLIEQMRFKQRLKVIQTLEDTTKRNVVRTIVTETSFTIDELEELYALFKAEHLT
SCYWGGSSNALDRHDPSLPYLEQYRIDFEQFKGMFLQLFPWACGTHSDVLASRLFQLLDE
NGDSLINFREFVSGLSAACHGDLTEKLKLLYKMHVLPEPSCDQDEPDSAFEATQYFFEDI
TPECTHVVGLDSRGKQSADDGFITVSLKQDRGKRANSQENRNYLKLWTAENKSKSKTAKD
LPKLNQGQFIELCKTMYNMFSEDPNEQELYHATAAVTSLLLEIGEVGKFFITQPAKEDAV
PGPPCGQAIPGMLFPKKGSSQSYVVESAEPLAASLAVDSEEHSLGGQMEDIKLEDSSPRD
NGACSSMLISDDDTKDDSSMSSYSVLSAGSHEEDKLHCEDIGEDTVLVRSSQGRATLPRS
SSLDRDWAITFEQFLASLLTEPALVKYFDKPVCMMARVTSAKNIRMMGKPLTSASDYEIS
ALSG
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaatcccgaggaggtgctgctggccaacgcnctgtggatcaccgagagagcc
aacccctacttcattctgcaacgaaggaagggccacgggggtgacgggggcggcggcggc
ggattggcgggcctcctcgtgggcaccctcgatgtggtattggactccagtgcccgagtc
gcaccgtaccgaatcctttatcagactccagactctctggtctattggaccattgcctgt
ggtggctccaggaaggaagttactgagcactgggaatggcttgaacagaatctactgcag
acactctccatctttgagaatgagaatgacgtcaccacgtttgtaagagggaaaatacag
ggcatcattgccgagtataacaaaatcaacgatgtgaaagaagatgaggatacagagaag
tttaaagaggccatcgtgaagttccacaggctgtttgggatgcctgaagaagagaaacta
gtcaactattactcgtgtagctactggaaggggaaggtccctcggcagggctgggtatac
ctaagcatcaaccacctgtgtttttcctccttcctgatgggaagggaagccaagctggtg
atccggtgggtggacatcactcagctggagaagaatgccacgctgctcctgccggatgtg
atcaaagtgagcacaaggtccagtgagcacttcttctccgtgttcctcaacatcaatgag
acgttcaagctgatggaacagcttgccaacatagccatgaggcagctcttggacaatgaa
ggatttgaacaggaccggtccctgccaaaactcaagaagaaatctcccaaaaaagtgtct
gctctgaaacgtgatctggatgccagggcgaagagcgagcgataccgtgcccttttccgg
ctgcccaaagacgaaaagctagacggccacactgactgcaccctctggaccccgtttaac
aagatgcacattttgggtcagatgttcgtctccactaattacatctgttttaccagcaag
gaggaaaacctctgcagcctcataattccactccgggaagtaaccatcgtggagaaggcc
gacagctgcagtgtgctccccagccctctgtccatcagcaccaggaacaggatgacattc
ctgttcgccaacttgaaggacagagactttttggtgcaaaggatctcagatttcttgcag
caaacaacttctagaatctactcggacaaagagttttcgggaagctgcaacagctcagat
gacgaggtgtattctcggcccagcagcctcgtttcctccagtccccagagaagcacaagc
tcggatgctgatggagaacgtccctttaacctcaatggcaacagcgtccctacagccacc
cagaccctcatgaccatgtaccggcggcgatctcctgaagaattcaacccaaaattggcc
aaagagtttttgaaagaacaagcctggaagattcactttgctgagtatgggcaggggatc
tgcatgtaccgcacagagaagacccgggagctggtgctgaagggcatcccagagagcatg
cgcggagagctctggctgctgctttcaggggccatcaacgaaaaggccacacaccccggg
tactacgaggacctcgtggagaagtctatgggaaagtacaatcttgccaccgaggagatt
gagagagacttacaccgctcccttccagaacacccagctttccagaacgaaatgggcatc
gcggctctgaggagagtcttaacggcttacgcttttcgcaatcccaacatagggtattgc
caggccatgaacattgtcacttcagtgctgctgctttacgccaaagaggaggaggccttc
tggctacttgtggccttgtgtgagcgcatgcttccggattactacaacaccagagttgta
ggtgccctggtggaccagggagtctttgaggagctggctcgagactatgtcccgcagctg
tacgactgcatgcaggacctgggggtgatctctaccatctccctgtcgtggttcctcacg
ctcttcctcagtgtgatgccatttgagagcgcagtggtggtggtggactgtttcttctat
gaaggaatcaaagtgatatttcagctggccctcgctgtcctggatgccaacgtggataaa
ctcttaaactgcaaggacgatggagaggccatgactgttttgggaaggtacctagacagt
gtgaccaacaaagacagcactctgcctcccatccctcatctccactccctgctcagtgat
gacgtggggccctaccctgcagtggacatcttcagactcatagggacgtcctacgagaaa
tttggaactatccgggccgatttgattgagcagatgagattcaagcagaggctgaaagtg
atccagaccctggaggataccaccaaacgcaatgtggtacggaccattgtgacggagacc
tcctttaccattgatgagctggaagagctgtacgctcttttcaaggctgagcatctgacc
agttgctactggggcgggagtagcaatgccctggaccgacacgaccccagcctgccttac
ctggagcagtaccgaattgactttgagcagttcaagggcatgttcctacaactctttccc
tgggcgtgtggcacacactcggatgtgctggcctctcgcctgttccagctgttagatgag
aatggagactccttgattaacttccgagagttcgtctctgggctgagtgctgcatgccat
ggggacctcacagagaaactcaaactcctgtacaaaatgcacgtcttgcctgagccatcc
tgcgatcaagatgagcccgactctgcctttgaagcgactcagtacttttttgaagacatc
accccagaatgcacacatgtcgttggcttggacagtagaggcaagcagagtgcggacgac
ggcttcatcacagtgagtctgaagcaggacagagggaaaagggcgaattctcaagaaaac
cgtaattacctaaaactctggaccgcagaaaataagtctaagtcaaaaactgccaaggat
ttgcccaagctgaatcaggggcagtttatcgagctctgtaagaccatgtacaacatgttc
agtgaagaccccaatgagcaggagctttaccatgccacagctgcggtgaccagcctcctg
ctggagatcggagaggttggcaagttcttcattactcagcccgcaaaggaagatgcagtt
cctggaccaccctgcggccaggccatcccaggcatgctcttccctaagaaggggtccagc
cagtcctatgtggtggagtccgcagagccactcgcagctagcctggcagtggacagtgag
gagcactccctgggagggcagatggaggacattaaactggaggactcctcacccagggac
aacggggcctgctcctccatgttgatctccgatgatgataccaaggatgacagctccatg
tcatcctactcggtgctgagcgccggctcccacgaggaggacaaactgcactgtgaggac
atcggggaggacacagtcctggtgcgtagcagtcagggtagagccaccctgcccaggagc
agcagcctggaccgggactgggccatcacctttgagcagttcctagcctcgctcttgaca
gagcctgctctcgtgaagtactttgacaagccagtgtgcatgatggccagggtcaccagt
gcaaagaacatccgtatgatgggcaagcccctcacctcagccagtgactacgaaatctct
gccctgtcaggctga
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integrated database retrieval system
