Mus pahari (shrew mouse): 110337371
Help
Entry
110337371 CDS
T05929
Symbol
Taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110337371 (Taf1c)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
110337371 (Taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
110337371
NCBI-ProteinID:
XP_021075902
Ensembl:
MGP_PahariEiJ_G0023221
LinkDB
All DBs
Position
20:complement(42785821..42792707)
Genome browser
AA seq
855 aa
AA seq
DB search
MDFPGTLRPSLFMTGPLGMTDGPDLSFMCSWRDALTLPGAQPQNCKNPTLSFAKNLLWEP
STPGPLPLVPSDPDPWDPGVTAQDFLFRGGHCYQYQSQAVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFRLEGNRGYSKKMTIVSAKRLLQDLGGHQPWGCPWASLSRRLRRFSIVGGP
VLSRSVSLLMGKLLHEELAMRWEQLLMDEAFTGGALAWLPGRTARAGQLVYPSGGALDEL
YFQEVSVTSSGNPRILENPGHVQLRGPVRQVVTSTVQGESKISFLPPSRPTSYHPSPALL
AVRSDYHCAMWKIDKQEPPAPLKVLQVEKGATGISLSPHLSGELAICSRSGAVCLWTPQD
GLQMVYKDPETLAFCDPSPWRWADFTAHPRVLTVGDRTGVKMVDIQGPPGCGLLLFRAGA
EAACQKGERVLLAQYLGQPGHTSTSLHLICTQFSIYLMDERLPLVPMLKWDHGLPSAPLL
ARLLPPASPGHPRPLLLGGQGGQLQLLHITGEGTSMPQLAGPPQSLPSITDSLSAFPLLE
PKRQQQLQERLEAPVIGLAAVPLCASTPGLLLFQLSAAGDVFHQHLRLLQASSPREPPPA
PGATAPSVDQVPTPSWTSQASARCSRWLEALMELPPTRPLWAAPTFSHRRFLGHMERQKS
QETLAQKLRAAMAKGQLLRHGDLSTLPRAEPPPAPQCSQQDELTERLAEAWEGRAAAWWR
KHRGQPSEPQTQSKRPKRRTQLSSTFSSFTSYWDTPDASSAPRSQDLSTSEARSQPPGIP
PSQELTQELWAQGVKRERQRTLRDYMAKLPLQMDTPEPVAIPPSQASSLQTMSLMQQTPV
LSGSQPPRKKPRMGF
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccggcaccctgcgcccttcattgtttatgaccggccctcttggcatgact
gatggccctgacctgtccttcatgtgcagctggagagatgcactgactctgccaggggcc
cagccacagaactgcaagaatccgaccttgtcctttgccaagaacctattgtgggagcca
tcaacaccaggacccctccccctagtgccttctgatcctgatccctgggaccctggtgtg
acagctcaggacttccttttccggggaggtcactgctaccagtaccaatctcaagctgtg
ctagatgtcactgagcagctcagccgcttcctgtgggaccatggcgatatagccttcgca
cccctaggcaaactcatgctggagaacttccgattggaggggaaccggggctactcgaaa
aagatgaccatagtcagcgcgaagaggctgcttcaggacctcggcggacaccagccctgg
gggtgtccctgggcttccctcagccgccggctgcgtcgcttctccatcgtcgggggtcct
gtcctgagcaggtcagtgtcattactcatggggaagctactgcatgaagagctggccatg
cgctgggagcagctgctgatggatgaggccttcaccgggggcgcgttggcctggctgccc
ggaaggacggcgcgggccggacagctggtctaccctagtggaggtgccttggacgagctg
tatttccaggaggtcagtgtgacttcaagtggcaacccccggatccttgagaaccctggg
catgtccagctgcggggacctgtacggcaggtggtgaccagcaccgtccagggagaaagt
aagatttctttcctccctccctcccgtccaactagctaccatccttccccagcgcttctg
gccgtccgctctgactaccactgtgccatgtggaagattgataagcaggagccaccagca
cccctgaaggtcctgcaggtggagaagggggccactggtattagcctcagccctcacctg
tcaggagagctggccatctgcagccgttctggagctgtgtgtctgtggaccccgcaagat
gggctgcagatggtctacaaggaccctgagacgcttgccttctgtgatccgtctccctgg
cgctgggcagacttcactgcccacccccgggtgctgactgtgggggaccgcacgggtgtg
aaaatggttgacattcagggcccgccgggctgtgggttgctgctgttccgcgctggagca
gaggctgcctgccagaaaggagagcgggtgttgcttgcccagtacctagggcagccgggt
cacacctctacgtctctgcatctcatctgcacccagttttcgatctacctgatggatgag
cgcctccccctggtgcccatgcttaagtgggaccatggcctgccatctgctcccctgctt
gcccgcctgctacccccagctagccctggccatccacggcccctgctactgggaggccag
ggtgggcagctgcagctgcttcatataacaggagaggggacttccatgccacagctggca
gggcctcctcaatctctgccctccatcaccgactccctctctgcctttcccctgctggaa
cctaagaggcagcagcagctgcaggaacgtctggaggcaccagtcataggtctggcagct
gtcccgctctgtgcctctaccccggggctgttgctcttccagctctcagcagctggggat
gtcttccaccagcacttacgcctcctgcaagcctccagtcctagagagccaccacctgca
cccggggcgacagcaccctcagtggaccaggtgcccacgccctcttggacctctcaggcc
agtgcccgttgcagccgctggctggaggccctgatggagttgccccccactcgtcctctg
tgggccgccccgaccttctcccaccgccgttttctgggccacatggagcggcagaagagc
caagagaccttggcacagaagctccgagcagccatggccaagggccagctcctgcggcat
ggggacctgagtacactccccagggcggagccaccccctgcacctcagtgcagccagcag
gatgagctcactgagcgcttggcagaagcctgggaaggccgggcagctgcctggtggagg
aaacatcgaggtcagccctctgagccccagacccagtccaagcggcccaagcgacggact
cagctgtctagcaccttctcctcattcacaagctactgggacaccccagatgccagcagt
gcccctcgtagccaagacctctctacctcagaggcccgttctcagccacccgggattcca
ccctcccaggagttgacacaggagctgtgggcccaaggtgtgaagcgtgaacgccaaagg
accctccgggactacatggccaagctgccacttcagatggacactccagaacctgtggct
ataccaccctcccaggcctctagtcttcagaccatgtctctcatgcagcaaacgcctgtc
ctctctggctcccagcctccccggaagaagccacgaatgggcttctga
DBGET
integrated database retrieval system
