Mus pahari (shrew mouse): 110337490
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Entry
110337490 CDS
T05929
Symbol
Map1lc3b
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3B isoform X1
KO
K10435
microtubule-associated protein 1 light chain
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04137
Mitophagy - animal
mpah04140
Autophagy - animal
mpah04216
Ferroptosis
mpah04371
Apelin signaling pathway
mpah04621
NOD-like receptor signaling pathway
mpah05014
Amyotrophic lateral sclerosis
mpah05022
Pathways of neurodegeneration - multiple diseases
mpah05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110337490 (Map1lc3b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110337490 (Map1lc3b)
04137 Mitophagy - animal
110337490 (Map1lc3b)
09143 Cell growth and death
04216 Ferroptosis
110337490 (Map1lc3b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110337490 (Map1lc3b)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
110337490 (Map1lc3b)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110337490 (Map1lc3b)
05022 Pathways of neurodegeneration - multiple diseases
110337490 (Map1lc3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110337490 (Map1lc3b)
03029 Mitochondrial biogenesis [BR:
mpah03029
]
110337490 (Map1lc3b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpah04812
]
110337490 (Map1lc3b)
Membrane trafficking [BR:
mpah04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
110337490 (Map1lc3b)
Mitochondrial biogenesis [BR:
mpah03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
110337490 (Map1lc3b)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
110337490 (Map1lc3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
110337490
NCBI-ProteinID:
XP_021076096
Ensembl:
MGP_PahariEiJ_G0023247
LinkDB
All DBs
Position
20:44781518..44789266
Genome browser
AA seq
125 aa
AA seq
DB search
MPSEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM
SELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG
TALAV
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgagaagaccttcaagcagcgccggagctttgaacaaagagtggaagatgtc
cggctcatccgggagcaacaccccaccaagatcccagtgattatagagcgatacaagggc
gagaagcagctgcccgtcctggacaaaaccaagttcctggtacctgaccacgtgaacatg
agcgagctcatcaagataattagacggcgcttgcagctcaatgctaaccaagccttcttc
ctcctggtgaatgggcacagcatggtgagtgtgtccacgcccatctctgaagtgtacgag
agcgagagagatgaagatggcttcctgtacatggtttatgcctcgcaggagacattcggg
acagcactggctgtgtaa
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