Mus pahari (shrew mouse): 110337612
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Entry
110337612 CDS
T05929
Symbol
Tnpo2
Name
(RefSeq) transportin-2 isoform X1
KO
K18727
transportin-2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110337612 (Tnpo2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110337612 (Tnpo2)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110337612 (Tnpo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
Arm
HEAT_2
IBN_N
Cnd1
Vac14_Fab1_bd
PDS5
Adaptin_N
MMS19_C
UNC45-central
SCD
Dopey_N
RTP1_C1
DUF2573
Motif
Other DBs
NCBI-GeneID:
110337612
NCBI-ProteinID:
XP_021076276
Ensembl:
MGP_PahariEiJ_G0022931
LinkDB
All DBs
Position
20:9517884..9538719
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AA seq
897 aa
AA seq
DB search
MEWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDE
PTRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGE
LQMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNVMIPKFLQF
FKHCSPKIRSHAIACVNQFIMDRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLTHEAERPDSSEDAED
DDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVLGA
IAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQPPDMHLKPLMT
ELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLILYD
AIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLP
YCEPVYQRCVTLVQKTLAQAMMYTQHPEQYEAPDKDFMIVALDLLSGLAEGLGGHVEQLV
ARSNIMTLLFQCMQDSMPEVRQSSFALLGDLTKACFIHVKPCIAEFMPILGTNLNPEFIS
VCNNATWAIGEICMQMGAEMQPYVQMVLNNLVEIINRPNTPKTLLENTGRLTSPSAIPAI
TIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFI
FFCDAVASWVSPKDDLRDMFYKILHGFKDQVGEENWQQFSEQFPPLLKERLAAFYGV
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccagacgagcagggcctgcagcaggtcttgcagcttctcaaagactcg
cagtcgcccaacacagctactcagcgcattgtgcaggataaacttaaacaactcaaccag
tttcctgactttaacaactacctgatcttcgtcctgactagactcaaatcagaagatgag
ccaacccgctctctgagtggcctcatcctcaagaacaatgtgaaggcgcattaccagagc
ttcccgcctcctgtggctgacttcatcaaacaggagtgtctcaacaacattggcgatgcc
tcctctctcatcagagccaccatcggcattctcatcaccaccatcgcttccaagggtgag
ctgcagatgtggccggaactgctgccccagctgtgcaacctgctcaactcagaggattat
aatacctgtgagggagcctttggagccctacagaagatctgtgaagactcctcggagctt
ttggatagcgatgctctcaacaggcccctcaatgtcatgatccctaaattcctgcagttt
ttcaagcactgcagccctaagattcggtcccatgccattgcctgtgtgaaccagttcatc
atggaccgggcccaagcgctgatggacaacattgacactttcattgagcacctgtttgcc
ttggctgtggatgatgaccctgaggtgagaaagaatgtgtgccgagctctcgtgatgctt
ctggaagtgcgaattgacaggctcatccctcacatgcacagcatcatccagtacatgctg
cagaggacccaggaccatgatgagaatgtggccctggaggcctgtgagttctggctgacg
ctagctgagcagcccatctgcaaggaagtcctggcctctcacctggtccagttgatccct
atcctcgtgaatgggatgaagtactctgaaattgacatcatccttctcaagggggatgtg
gaggaggatgaggcggtgcctgacagcgagcaggacatcaagccacggttccacaagtca
cgcacagtgacattgactcacgaggctgagcggcctgatagctctgaggatgctgaggac
gatgatgacgacgatgctttgtcagactggaatctgagaaagtgctctgcagctgcgctg
gatgtccttgccaatgtcttccgggaggaactgctgccccacctacttcccctgctcaag
ggcctcctattccaccctgagtgggtggtcaaggagtcaggaatcctggtgctgggcgcc
attgctgagggctgcatgcagggaatggtgccctatctacctgagctgatcccacacctc
atccagtgcctgtcagataagaaggccctagtccgctccattgcctgctggacactgagc
cgctatgcccactgggtagtcagccagccacctgacatgcacctcaagcctctgatgacg
gagctgctcaagcgtatcctggacggcaataagagggtgcaggaggcagcctgtagtgca
tttgctaccctggaggaggaggcatgcacggagctggtgccctacctcagctatatcctt
gacactcttgtttttgcctttggcaaataccagcataagaacctgctcatcctctatgat
gccattggcaccctggcagactctgtgggccaccacctcaatcagccggaatacattcag
aagctgatgcctccgctgatccagaagtggaacgagctcaaggacgaggacaaggacctc
ttccccctgctggagtgcctatcatctgtggccactgccctgcagagtggcttcctgccc
tactgtgagcctgtctaccagcgctgtgttaccctggtacagaagacactggcccaggcc
atgatgtacacacaacaccccgaacaatatgaggccccagacaaagacttcatgattgtt
gcattggacctgcttagtggcttggctgagggcctgggtggccacgtggaacagctggtg
gctcggagtaacatcatgacattgctcttccagtgtatgcaggattccatgcctgaggtc
cggcagagctcctttgcccttctgggagaccttaccaaagcctgctttatccacgtcaag
ccctgtatcgctgagttcatgcctattctgggcaccaacctgaaccccgagttcatctct
gtctgcaacaatgctacctgggccattggggagatctgcatgcagatgggggcagagatg
cagccttatgtgcagatggtcctcaacaatctggtggagatcattaacaggcccaacacg
cccaagacactgctggaaaacacaggtcgcctgacgagtccctctgccattccagccatc
accattggccgcctgggctacgtgtgcccgcaggaggtggcacccatgctgcagcagttc
atccggccttggtgcacgtcccttaggaacatccgggacaacgaggagaaggattctgcc
ttccgaggcatctgcatgatgattggtgtcaatcctgggggtgttgtgcaggactttatt
ttcttctgcgatgctgtagcctcctgggtgagcccgaaggatgaccttcgggacatgttt
tataagatccttcatggcttcaaagaccaagttggggaggagaactggcaacagttctca
gagcagttcccacctctgctcaaggagaggctggcagccttctatggggtctag
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