Mus pahari (shrew mouse): 110337637
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Entry
110337637 CDS
T05929
Symbol
Usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpah01002
]
110337637 (Usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110337637 (Usp38)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110337637 (Usp38)
Peptidases and inhibitors [BR:
mpah01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110337637 (Usp38)
Ubiquitin system [BR:
mpah04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110337637 (Usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
HPF1
Motif
Other DBs
NCBI-GeneID:
110337637
NCBI-ProteinID:
XP_021076318
Ensembl:
MGP_PahariEiJ_G0022864
LinkDB
All DBs
Position
20:complement(5593865..5625003)
Genome browser
AA seq
1042 aa
AA seq
DB search
MDKILEGLVSSSHPLPLKRMIVRKVVEFAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQV
GHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSV
LELFSLLQVEVLRMVCERPEPLLCARLSDLLTDFVQCVPKGKLSITFCQQLVRTIGHFQC
VSTQEKELREYVSQVTKVSTLLQNIWKAEPSTLLPSLQEVFASISSTDASFEPSVALASL
VQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHVIVPHIVNLVH
SFRSDGLPSSTALLVQLTELVHCMMYHYSGFPDLYEPVLEAIKDFPKPSEEKIKLILNQS
AWTSQSNALASCLSRLSGKSETGKTGLINLGNTCYMNSVLQALFMATEFRRQVLSLNLNG
CNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEE
KILRVQSSHKPSEGLDCAETCLQEVASKVAVPTESPGTADSEKTLIEKMFGGKLRTHICC
LNCGSTSHKVEAFTDLSLAFCPSPSVEDLSFQDTASLPSAPDDGLMQTSVTDPEEEPVVY
NPATAAFVCDSVVNQRVLGSAPVEFHCAENSSAPEDSAKILISKDGPQNPGGESTTSVTD
LLNYFLAPEVLTGENQYYCESCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKI
LDNVSLPLVLELPVKRTASFSSLSQSWSVDVDFTDINENLPKKLKPSGTEEALCPQLVPY
LLSSVVVHSGVSSESGHYYSYARNITGTESSYQMCPQSESLALAPSQSCLLGIENPNTVI
EQDLENKEMSQEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQSRANGIGSDNP
ASGVWVNGDPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPP
GSCGPTGGGGGGGFNTVGRLVF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattctggagggcctggtgagctcctcgcacccactgcccctcaagcggatg
attgtgcggaaggtggtggagttcgcggagcattggctcgacgaggcgcagtgcgaggcc
atgtttgacctgacgacccgcctcatcctggagggccaggaccctttccagcgacaagtg
ggccaccaggtgctggaggcctacgcgcggtaccaccggccggagttcgagtccttcttc
aacaagactttcgtgttgggcctccttcagcagggctaccactcgctggacaggaaggac
gtcgccatcctggactacattcacaacggcctgaagctgatcatgagctgcccgtcggtg
ctggagctcttcagcctgctccaggtggaggttctgcgaatggtttgcgagaggccggag
ccactgctctgtgcccggctgagcgaccttctgaccgatttcgtgcagtgcgtccccaaa
gggaaactgtcaattaccttctgtcaacagctggttcgaacgataggtcatttccagtgc
gtgtccactcaggagaaggaactgcgggagtatgtctcccaggtaacgaaagtgagtacc
ttactgcagaatatttggaaggctgagccctccacgctgctaccttctctgcaagaagtc
ttcgcaagcatctcgtccacagatgcatctttcgagccctcagttgccttggcaagcctg
gtgcagcatattcctctgcagatgatcacagtcctcatcaggagcctcaccaccgaccca
aacgtaaaagatgccagcatgacccaagctctctgcagaatgattgattggctgtcctgg
ccattggctcagcatgtagatacatgggtaattgctctcctgaaaggactggcagctgtt
cagaagtttactattttgatagatgttactttgctgaaaatagaactggtctttaaccga
ctttggtttcctcttgtgagacctggtgctcttgcagtcctctctcatatgctgcttagt
tttcagcattctcctgaggcattccatgtgattgttcctcatatagttaacttggttcac
tccttcagaagtgacggcctgccttccagcacagccctcttagtgcagttaacagagttg
gttcactgtatgatgtaccattattccggatttccagatctctatgagcctgttctggag
gcaataaaggattttcctaagcccagtgaagagaagattaagttgattctcaatcaaagt
gcctggacttctcaatccaatgctttggcatcttgcttgtctagactttctggaaaatct
gaaactgggaaaactggtcttattaacctgggaaacacatgttacatgaacagtgtttta
caagcattgtttatggctacagagttcagaagacaagtattatctttaaatctaaatggg
tgtaattcgttaatgaaaaaattacaacatctctttgcttttttggctcatacacaaagg
gaagcttacgcacctcggatattttttgaggcttccagacctccgtggtttactcccagg
tcacaacaggactgctctgagtacctcaggtttctgctggacagactccatgaagaagaa
aagatcttgcgagttcagtcctcacataagccttctgaaggtctggactgtgctgaaact
tgtttacaagaagtagccagtaaggtagcagtgcccacagagtcccctggtacagctgac
agtgagaagactctaatagagaaaatgtttggggggaagctacggactcacatctgctgc
ctaaactgcgggagtacctcacacaaagtggaagccttcacagatctttcgctagccttt
tgtcctagcccttctgtggaagacctgtctttccaagatacagcttcgttacccagtgct
ccagatgatgggctaatgcaaaccagtgtcactgacccagaagaagaaccagtagtttat
aatccagcaacagctgcctttgtctgtgactcagttgtgaatcaaagagtattaggcagt
gctcctgtggagtttcactgtgctgaaaactcttctgcccctgaagactctgcaaagatt
ctcatcagtaaagatggacctcagaacccgggaggcgaaagcacaacttcagtgacggac
ttactaaactactttctggctccagaggttcttactggtgagaaccaatactactgtgaa
agctgtgcctctctacagaacgcagagaaaactatgcaaatcacggaggagcctgagtat
cttatccttaccctcctgagattctcctatgatcagaagtaccatgtgagaagaaaaatt
ttagacaatgtgtcactgcctctggttttggagttgccagttaaaagaactgcttccttc
tcttccttgtcacagagttggtctgtagatgttgacttcactgatattaatgagaaccta
cctaagaaattaaaaccttctgggactgaagaagctctctgcccccaattggtgccctac
ctattaagttcggttgttgtgcactctggtgtgtcctctgagagtggccattactattct
tatgccaggaacatcacaggtacagagtcttcataccagatgtgcccccagtctgaaagt
ctggcattagcaccctcccagagttgtttactagggatagaaaaccccaatacagtcatt
gaacaggacttggaaaataaggaaatgtcacaagagtggtttttatttaatgacagcagg
gtgacatttacttcatttcagtcagtccagaaaatcacaagtaggtttccaaaagacaca
gcttatgtgcttttgtacaaaaaacaaagcagagctaatggcataggcagtgacaatcca
gccagtggtgtctgggtcaatggagatccacccctacagaaagagctgatggatgccata
acaaaggacaacaagctgtatttgcaggaacaagaattgaatgctcgagcccgggcccta
caagctgcatctgcttcctgttcgtttcggcccaatggatttgatgacaatgacccacca
ggaagctgtgggccaactggtggagggggtggaggaggattcaatacagttggcagactc
gtattttga
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integrated database retrieval system
