Mus pahari (shrew mouse): 110337794
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Entry
110337794 CDS
T05929
Symbol
Chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110337794 (Chd9)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110337794 (Chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Ig_GEX2_N
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
110337794
NCBI-ProteinID:
XP_021076492
Ensembl:
MGP_PahariEiJ_G0022964
LinkDB
All DBs
Position
20:15114515..15334466
Genome browser
AA seq
2867 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMADFEQLNQFDSMKFHPVNQSFGSPVEHVLSPHSQFNCSPIHPPNQPNGLFQDVAD
GSPMWGHQTAPGLANQNGSPFHQPGHSHSLHQNKSFVAHHDFALFQASEHQTQCSSLHSQ
QNRRNLNPGQNSLGQAKNFLDANVNSAHRVNVNHLATAPSSQQTLPVPFSPTANPPAHFL
KCSSHQEGNYNRPSPSMTSCSVSNSQQFPAHYSFSSGHVSPSSLLQSSAGLTPSHTNQAL
SDFAGSNSFSPHRGMKQEPAQHLLNPTPSLNSNNFPILHSSHPQGNYSNSKLSPVHMNFP
DPVDAGPPVGHFNDHAETNGFSSLEENLLHHVESHAEPFAGLDPEDLLQEGLLPQFDESP
FGQDNSNHVFDHDLDRQFTSHLVARPSDMAQTQLQYQARGWPSPLSNNHQHLHSRNHLCL
QRQPPSSKKSDGSGTYTKLQNTQVRGMSEKKPRKRVESESKQEKANRIISEAIARAKERG
ERNIPRVMSPENFPSASVEGKEEKRGRRMKSKPKDRDNKKPKTCSKLKEKSKIGKLIITL
GKKHKRRNESSDELSDAEQRSQHMFKEQHSQKRRSNRQIKRKKYAEDAEGKQSEEEVKGS
LRVKRNSAPPPGEQPLQLFVENPSEEDAAIVDKILACRIVKKEVSPGVMLDVEEFFVKYK
NYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVEVDRILEV
SFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLDRPP
ANMWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYE
ILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGR
IIRGAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHK
VLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRR
LKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELR
KCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKV
LIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRAS
LKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDIDQ
ILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDTISGRN
SLVIDTPRIRKQTRPFSATKDELAELSEAESEGEEKPKLRRPCDRSGGYGRTECFRVEKN
LLVYGWGRWREILSHGRFKRQLNEHDVEVICRALLAYCLVHYRGDEKIKGFIWDLITPTE
DGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKHVK
HHCNKVLLRVRMLYYLKQEVIGNESQKVFDGVDASDIDVWVPEPDHSEVPAAWWDFDADK
SLLIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAP
AIFKDDIEDDVSSPGDLVIADGEGQLMEGDKVYWPTPSALTTRLRRLITAYQRTNKNRHM
QQIQPTFSVPASVMQPLYEEAALNPKVAAKIERQQRWTRREEADFYRVVSTFGVVFDPDR
GQFDWTKFRALARLHKKTDNSLEKYLCAFMSMCRRVCRLPSKEELVDPNIFIQPITEERA
SRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPIWWECGSHDRDLLIGAAKHGVSR
TDYHILRDPELSFMAAQRNYSHSKAAHSRTSTPLLQQYQVALSASPLTSLPRLLGAKGTL
LEDMKVKSENLTEEPPSSEEESMSSIETRTRVKSEPVSPKNGVLSQATGDQKSGGKSETD
RRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRS
GSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEDVQKREGTPHGKAYDEESVAS
LSTTQDETQDSFQANNGTPESAYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPS
ARRHYDANTVASFYTTKLLDSPGAATEHSEPGVPTPPAVAVKEEHEQSAQMSKVKKHVRE
KEFTVKIKDIPSALGRVNVSVALQLKIVQLSPISTSIQSTLGANGAILDSQPIVKKRRGR
RRNVEGADILFLNRNKPPNHLTLDLTASQISTGMNPALSYPQPPRIPDTESPVPVINLKD
GTRLAGDDAPKRKDLDRWLKEHPGYVEDLGAFIPRVQLHEGRPKQKRHRCRNPNKLDVNS
LTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMF
ERILTGPVVREEVSRRGRRPKSGIAKATIAAAAAAAAAAPAGSVPGNPLLANGLLPGMDL
TALQALQQNLQNLQSLQVTAGLMGMPAGLSSGGETKNMAAMFPMLFSGMAGLPNLLGMGG
LLSKTAESGAEEKRGTDSKELEGKEERTESQSPENGGERCVPGSPSTSSTAALNAAAAAK
PIALNPLLLSNILYPGMLLTPGLNLHLPTLSQSNTFDVQKNKSSDLDSSKSVEIKEEDSR
VRDQEEKGGTEPSSAHENSTDEGSERASSGSDSSSSSSEDSDSSNED
NT seq
8604 nt
NT seq
+upstream
nt +downstream
nt
atgacagacccaatgatggacttttttgatgatgctaatctttttggtgagactttagaa
ggcttgtcagatgatgcatttgtacagccgggacctgtctcactagttgatgaactgaac
ttgggtgcagagtttgagcctttgcacatagactcactaaaccatgttcaaggtactcca
acacatcagaagatggcggattttgaacagttaaatcaatttgactcgatgaagtttcac
ccagttaatcaatcttttggcagcccagttgaacacgtattatctccacactctcaattt
aattgctctccaattcatcccccaaaccagcccaatggcttgtttcaagatgtagcagat
ggtagtccaatgtggggtcaccagacagctccaggcctagctaatcaaaatggatccccc
tttcatcaaccaggacattcacactctctgcatcaaaataaaagctttgtggcacaccat
gattttgccttatttcaggccagtgaacatcaaacacaatgttcttcccttcactcacaa
caaaatagaaggaatcttaacccagggcaaaactctcttggccaggctaaaaattttcta
gatgctaatgttaacagcgcacacagagttaacgttaaccaccttgccactgccccctcc
tcacagcagactcttccagtgccattttctccgactgcaaaccctcctgcacacttcctc
aagtgcagcagtcaccaggaaggcaactataacagaccttctccaagtatgacttcctgc
tctgtgagtaactcgcaacagttccctgcacactattccttctccagtggtcacgtgtcc
ccaagcagtctccttcagtcatctgcaggtctcactcccagtcatacaaatcaggcttta
tctgattttgctggaagtaactccttttctcctcataggggaatgaagcaagaacccgct
cagcatctcctgaaccccactccatcactgaattcaaataactttccaattctgcattcg
tcacatcctcagggtaattatagcaactcaaaattatcgcctgtgcacatgaacttccca
gatcctgttgacgcaggacctccagtgggtcatttcaatgaccatgcagaaactaatggt
ttctcatctttagaagagaatttacttcatcacgtggaatctcatgcagaaccatttgca
ggacttgacccagaagacctcctgcaggagggtcttctcccccaattcgatgaatcacca
tttggacaagataattcaaatcatgttttcgatcatgaccttgatcgccagttcacttcg
catcttgtagcgaggccttctgacatggctcaaactcagctgcaatatcaggctcggggc
tggccttccccactgtctaacaaccatcaacatttacacagcagaaatcatctatgttta
cagcggcagcctccatcttccaagaagagtgatggttctgggacatacactaagctgcag
aatacccaggtgaggggcatgtctgagaagaagccacgaaaaagggtggaatcagaaagc
aagcaagaaaaggccaatcgtatcatatctgaggccatagcaagagcaaaggagcgaggg
gaacgtaatattccgcgagtaatgagccctgagaactttcctagtgcctcagtcgaaggg
aaagaagaaaagagaggtcggaggatgaaatctaagccaaaagacagagacaacaaaaaa
ccaaaaacgtgttctaagttgaaagagaagtcaaaaattggcaagctcatcattacattg
ggtaagaaacacaagagaaggaacgagtcttcggatgagctgtccgatgcagagcagagg
tcccagcacatgttcaaagagcagcactctcaaaaaagaagatcaaatcgacaaattaag
aggaaaaaatatgcagaagatgcagaaggaaagcaatctgaagaagaagtgaaaggcagt
ctgagagtgaagaggaactcggctcctccacccggagagcagcctctgcagctgtttgtg
gaaaatccaagtgaagaagatgctgcaattgtagacaaaatactagcttgtaggattgta
aaaaaggaagtatcacctggagttatgcttgatgtagaagaattttttgtaaagtacaaa
aattactcttatctccactgtgagtgggccacagaacagcagcttttgaaagataaaagg
atccagcagaaaatcaagcgattcaagctgagacaagcacagagggcacattttttggca
gatatggaagaagaaccctttaaccctgactacgttgaagtagacagaatattggaagtt
tctttttgtgaagataaggatactggtgagtctgttatttactacttggtaaagtggtgc
tcactgccatatgaagatagcacctgggaattaaaggaagatgtagatcttgcaaaaatt
gaagagttcgaacaactgcaagcttcacggcctgacacaagacacttggatcgtcctcct
gctaatatgtggaagaaaatagagcaatccagggaatataaaaatggcaatcaactcagg
gaatatcaactagaaggactcaactggctcttgttcaattggtataatagacgaaactgc
attttagcagatgaaatgggtcttggcaaaaccattcagtcgattacattcctctacgaa
atcctgctgacgggtataagaggacctttcctgattattgcaccgctttctaccattgca
aactgggaaagagaattccgaacatggactgatattaatgttgtcgtttatcacgggagc
ctgattagcagacagatgatacagcaatatgagatgtacttcagggactctcaggggcgc
atcatccgaggagcgtaccggttccaagccatcatcactacctttgaaatgattcttggg
ggctgtggagaacttaatgcaattgactggcgatgtgtgattattgatgaagcacacagg
ttaaaaaataaaaattgtaaactcctggagggtttgaaactcatgaatctggaacacaag
gtgctcttgaccggcactcctctccaaaacacagtcgaggaactgttcagccttcttcac
tttcttgaacccttaaggtttccatctgaatcaacattcatgcaagagtttggagacttg
aaaacagaggaacaggtacagaaacttcaggctatccttaaaccaatgatgctgagacga
ttaaaagaagacgtggaaaagaaattggcacccaaggaagagactattattgaagtagag
cttaccaacattcaaaagaaatactatagggctattttagagaagaacttctcattttta
tccaaaggagctggacaaacaaatgtacctaacttggtcaataccatgatggagctcagg
aaatgctgcaatcatccgtatcttatcaaaggtgctgaggagaaaatacttggagaattt
agagatacatacaatccatctgcctctgattttcatctgcaagcaatgatccaatctgct
ggtaaactggtcctcattgataagttacttcccaaaatgaaagcaggcggccataaagtg
cttatcttctctcagatggtccgctgccttgacatcctggaagactatcttatccataag
agatatttatatgagcgaattgatggtcgagtcagaggaaatcttcgacaagcagccata
gatcgatttagtaaacctgattcagatcgattcgttttcctcctgtgtacccgagctggt
ggtctgggcatcaacctaactgcagcagatacatgcatcatttttgattctgattggaat
cctcaaaatgacctccaggcccaagctcgttgccacagaattggtcagaacaaagcagtt
aaagtctacagattagtaacgcgtaactcctatgagagagagatgtttgaccgagccagc
ttgaaactgggcctagataaagccgtgctacagagcatgagtggaagagacagtaatgtc
agcggtattcagcagctttccaaaaaagaaatagaagacctgcttcgaagaggtgcatat
ggagccatcatggaggaggaagatgaaggctctaagttctgtgaggaagatatcgaccag
attttacttcgccgtacaaaaactatcacaattgagtcagaaggacgtgggtcaacgttt
gccaaggcaagttttgtagcatctggaaaccggacagatatttccttagatgatcccaac
ttctggcaaaaatgggctaaaaaagcagaactagatatagacaccatcagtggcagaaac
agtttagttattgataccccaagaattcggaagcaaaccagaccctttagtgccacaaaa
gatgaattagctgaattatctgaagctgaaagtgaaggagaagaaaaacccaaactccgg
agaccctgtgatcgatccggtggctacggaaggactgaatgctttagagtggagaaaaac
ctactggtttatgggtggggccgatggcgagagatcctgtctcatgggcgttttaagcgg
cagctgaatgagcacgatgtggaagtcatttgccgtgccctcctagcctattgcctcgtt
cactatcggggcgatgagaaaattaaaggcttcatatgggatctcatcactcccactgaa
gatggccagactcgcgagctgcagaatcacttaggcctctccgctcctgtgcccaggggc
cgaaaggggaagaaagtgaagactcagacaagctcctttgatatccagaaagcagagtgg
cttcggaaatataacccagagcagctcctgcaagacgagggctacaagaaacacgtaaag
caccactgcaacaaagtcctgcttcgtgtaaggatgctgtactatctaaagcaagaagtc
attggaaatgagagtcaaaaagtctttgatggagttgatgcaagtgacattgatgtttgg
gtgccagagccagaccattccgaggttcctgctgcgtggtgggactttgatgctgataag
tcccttcttattggggtttttaagcatggttatgaaaagtataacacgatccgagcagac
cccgcattgtgcttcttggaaagagtgggcaagcctgatgacaaggctgtcgctgctgaa
cagagagccaacgactacatggatggggatgtggaagatccagaatacaagcctgcccca
gcgatatttaaagatgatattgaggatgacgtttcctcacctggtgatctggtcatagct
gatggagagggtcaattgatggaaggggataaagtgtattggcctaccccatcagctctg
accacacggctaagacgtctcatcactgcatatcagcgaactaataaaaacagacacatg
cagcaaatacaacccaccttctcagtgcctgccagtgtcatgcagcctctttacgaagaa
gctgccctgaaccctaaagtggcagccaagattgaaagacagcagagatggacaaggaga
gaagaagctgacttttatcgagttgtgtctacatttggagtagtttttgacccagacaga
gggcagtttgattggacaaaattcagagctctggctaggctacacaagaaaactgataac
agcttggagaagtatttgtgtgcgttcatgtccatgtgccggagggtttgtcgtcttcct
tccaaagaagaattggtcgatccaaatatttttattcaaccaatcacggaagaacgtgct
tctaggactttatatcgcattgaacttctaagaaaagtacgggagcaggctcttcgtcac
ccacagttgtttgaacgcttgaagctttgccatccaaatccagacttacctatctggtgg
gagtgtggctctcatgatagggatttgctcattggtgctgccaaacacggagtcagccgg
accgactaccacattctgcgtgatcctgaactctcgtttatggcagctcagaggaactac
agtcatagtaaggcggctcactcaaggacttctaccccacttttacagcaataccaagta
gcactttctgcttctcctcttacctctttgcctagactgctaggtgctaaagggactctt
ctagaggatatgaaagttaagagcgaaaacctcacagaagagcccccgtcctctgaagaa
gaatctatgtcttctattgaaacaaggacacgagttaaatctgagcctgtaagtccaaag
aacggtgttttatcacaggctactggagaccagaaatctggtgggaaaagtgaaacagac
agacgcatggttgcagccagaacagaacccctaactccaaacccagcttctaagaaacag
agagtccacaaaagaggatcagagtccagttctgattctgactctgattctgagcgctca
tcgtgttcttccagatcctcctcctcctcttcctcctcctcttgttcacactctcgatca
ggctctagctcttcttcatcctcatcttgttcttcagcatcctcctcatcatcatcatct
tcctcctcctcttcctcatcttcttcatcatcatcagaagaaagtgacagtgaagaagat
gtccagaagcgagaaggcacgcctcacgggaaagcctatgatgaggaaagtgtcgcatca
ctgagcacgacccaagacgaaacccaggacagttttcaggcaaacaatggaacgccagag
tctgcttacctgctacaaggtggatatatgctggcagcctcgtattggccaaaggaccgg
gtgatgatcaaccgcctggacagtatttgtcagacagttctgaaagggaagtggccgtca
gctagaagacattatgatgctaacacggtggcatccttctataccacaaaactcctggat
agccccggagcagctacagagcacagcgagcccggcgtccccacacctccagccgttgct
gtcaaagaagagcatgaacagtcagcacagatgtcaaaggtgaagaagcatgtgcgagaa
aaggagtttacagtgaaaatcaaagacataccatcagcattaggtcgtgtgaacgtttca
gtggcattgcagctgaagattgtccagctgtcacctattagtacttccattcagtcaacc
cttggggccaatggagcgatactagacagccagcctatagtgaagaaaaggcggggaagg
agaaggaacgtagaaggtgccgacatcctctttttgaacagaaataagccacctaatcat
ttgactttagacttaactgcctcacagatttccaccgggatgaacccagcactgtcctat
cctcagcctccaagaattcctgacacagaaagtcctgttccagttattaatctcaaagac
gggacaaggctcgcaggagatgatgcgccgaagagaaaggacctggacagatggcttaag
gagcaccccggttatgtggaggaccttggagcctttatcccaagagtgcagctgcacgag
ggaagacccaaacagaagaggcatcgatgccgaaacccaaacaaactagatgtcaacagt
ctcactggagaggagcgtgtgcagctgattaacagaaggaacgcgaggaaggttggaggt
gcatttgctcctcctttgaaagacttatgtagattcctgaaagaaaattcagaatatgga
gtagctcctgaatggggagatgttgttaagcagtctgggtttcttccagaaagtatgttt
gaacgtattctcactggtcctgtcgtgagagaggaagtaagcaggcgggggagaaggcct
aaaagtggaattgccaaggccaccatagcggcggcggcggcggcggcggcggcggctcct
gcaggcagtgtgccaggcaaccctttgctggccaatggattgcttccaggcatggatctc
acagctcttcaggccttacaacaaaatctgcagaacctgcagtcgctgcaagtgactgca
gggctgatgggcatgcctgccggcctctcttctggaggagaaactaaaaacatggctgct
atgttccccatgctgttctcaggaatggccgggttaccaaatctgctaggcatgggagga
ctcctgtcaaagactgcagaatctggggcggaagaaaaacgaggaactgactctaaggag
ctagaaggaaaagaagaaaggacagagagccaaagtccggaaaatggaggagagcgttgt
gtaccaggctctccttcaacgtcctccacggctgcattgaatgcagctgcagctgccaag
cccatagctcttaacccactgttgctgtctaacatactttacccagggatgctgctcact
ccaggccttaatcttcatcttccaaccttgtctcagtccaatacttttgatgtacagaaa
aacaaaagtagtgacttagattcatctaagtcagtcgaaataaaggaagaagattccaga
gttcgagatcaggaagagaaagggggaactgagcctagttctgcccacgagaacagcaca
gacgagggttcagagagagcctcctccgggtctgacagttcgtcgtcgtcatcggaggat
tcagactcaagcaatgaagactga
DBGET
integrated database retrieval system
