Mus pahari (shrew mouse): 110337858
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Entry
110337858 CDS
T05929
Symbol
Traf7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110337858 (Traf7)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110337858 (Traf7)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110337858 (Traf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_EML
Beta-prop_SCAP
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
NBCH_WD40
WD40_like
Beta-prop_SPT8
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4
zf-C3HC4_2
Sina_ZnF
zf-TRAF
zf-C3HC4_4
Beta-prop_IFT140_2nd
Beta-prop_EIPR1
zf-C3HC4_3
Beta-prop_Nup120_160
zf-RING_5
PKcGMP_CC
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Filament
DUF4164
U-box
DUF16
Crescentin
KxDL
Motif
Other DBs
NCBI-GeneID:
110337858
NCBI-ProteinID:
XP_021076563
Ensembl:
MGP_PahariEiJ_G0023506
LinkDB
All DBs
Position
21:complement(19450726..19468945)
Genome browser
AA seq
641 aa
AA seq
DB search
METTFGPTFSTATTISKAADGTGTYKHRRTPSSSSTLAYSPRDEEDGMPPINTPRRSDSA
ISVRSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLCCQLCCSVFKDPVITTCGHT
FCRRCALKSEKCPVDNAKLTVVVNNIAVAEQIGELFIHCRHGCHAVGTGKPGVFEVDPRG
CPFTIKLSARKDHESSCDYRPVRCPNNPSCPPLLKMNLEAHLKECEHIKCPHSKYGCTFI
GNQDTYETHLETCRFEGLKEFLQQTDDRFHEMHVALAQKDQEIAFLRSMLGKLSEKIDQL
EKSLELKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCK
GTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQG
CKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTE
LKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVLQTSGGSVYSIAVTN
HHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWS
MDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVWTC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacctttgggcctaccttttcgacagccaccactatcagcaaagcagctgat
gggaccggcacatacaaacatcgcaggacaccttcctcctctagcacccttgcctattcg
ccacgggatgaggaggacggcatgccccccatcaacactcctcgccgctctgactcagcc
atctctgtccgctccctacactccgagtccagcatgtccctgcgctccacattctcgctg
cctgaggaggaggaggagccggagccattggtatttgccgagcagccctcggtaaagctg
tgctgccagctctgctgcagtgtgttcaaggaccccgtgatcactacatgtgggcacacc
ttctgcagacgatgcgccttgaagtcagagaagtgtcctgtggacaatgccaagctgaca
gtagtggtgaacaacattgcagtcgctgagcagattggagagctcttcatacattgtcgg
catggctgccacgcagtgggcactggaaagcctggggtctttgaggtagaccctaggggc
tgccccttcaccatcaagcttagtgcccggaaggaccacgagagtagctgtgactacagg
cctgtgcgctgccccaacaaccccagctgcccaccccttctcaagatgaacctcgaggcc
cacctgaaggaatgcgagcacatcaagtgtccccactccaagtacgggtgcacatttatt
gggaatcaggacacctatgagacacacttagaaacatgccgctttgagggcctgaaggag
ttcctgcagcagaccgatgaccgcttccacgagatgcatgtggcactggcccaaaaggac
caggagattgccttcctgcgttccatgctgggcaaactctcagagaagattgaccagcta
gagaagagccttgagcttaagtttgacgtcctggatgagaaccagagcaagctcagtgag
gacctcatggagttccggagggacgcgtccatgctgaatgatgagctgtctcacatcaat
gcacggctgaacatgggtatccttggatcctatgaccctcagcagatctttaagtgcaaa
gggacctttgtgggacaccagggccctgtctggtgtctctgtgtctattccatgggtgac
ctgctcttcagtggctcttctgacaagacgatcaaggtatgggacacgtgtaccacttac
aagtgccaaaagacactggaaggtcatgatggtattgtgctggcgctctgtatccagggg
tgcaaactgtacagtgggtctgcagactgcaccatcattgtgtgggacatccagaaccta
cagaaggtgaacactatccgggcccacgacaaccctgtgtgcacactggtgtcttcccac
aacatgctcttcagtggctccctgaaagccatcaaggtctgggacatcgtgggcactgag
ctaaagttgaagaaagaactcacaggcctcaaccactgggtgcgggccctggtggcagca
cagagctatctgtacagtggctcttaccagacaatcaagatctgggacattcggaccctt
gactgcatccatgtcctgcagacatctggtggcagtgtgtattccattgctgtgacgaat
caccacattgtctgtggcacctatgagaacctcattcatgtgtgggacattgaatccaaa
gagcaggtgcggaccctcacaggccacgtgggcacagtatatgccctggcagtcatttca
acaccagaccagaccaaagtcttcagtgcatcctatgaccggtccctcagggtctggagt
atggacaacatgatctgcacacagacgctgctgcgccatcagggcagtgtaaccgcactg
gctgtttcccggggccggctcttctcaggggctgtggacagcaccgtgaaggtctggaca
tgctaa
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integrated database retrieval system
