Mus pahari (shrew mouse): 110337898
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Entry
110337898 CDS
T05929
Symbol
Tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110337898 (Tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpah03009
]
110337898 (Tbl3)
Ribosome biogenesis [BR:
mpah03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110337898 (Tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Utp13
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_VPS8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
PEP5_VPS11_N
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_WDR35_2nd
Ge1_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
110337898
NCBI-ProteinID:
XP_021076632
Ensembl:
MGP_PahariEiJ_G0023516
LinkDB
All DBs
Position
21:complement(19644249..19652362)
Genome browser
AA seq
801 aa
AA seq
DB search
MAETAAGFCRFKANYAVERKIEPFYKGGKAQLDQTGHYLFCVCGTKVNILDVASGALLQS
LEQEDQEDITAFDLSPDDEVLVTASRALLLAQWAWREGTVTRLWKAIHTAPVASMAFDAT
STLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSVRVW
SLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLQSYQTTRTVPVFESVE
ASVLLPEHPAPALGVKSSGLHFLTAGDQGILRVWEAASGQCVYTQPQMPGLQQELTHCTL
ARAAGLLLTVTADHNLLLYEAHSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLK
VFELQTLACQILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGH
THSVGTICCSRLKESFLVTGSQDCTVKLWPLPEVLLSKNTAEDSGPMLLQAQTTQRCHDK
DINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLATAS
ADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNECVRT
LDAHEDKVWGLHCSRLDDRAITGGSDSRIILWKDVTEAEQAEEQAKREEQVIKQQELDNL
LHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATVLRLRRDQKEALLRFCVT
WNTNSRHCHEAQAVLGVLLRHEAPEELLAYDGVRGALEALLPYTERHFQRLSRTLQAATF
LDFLWHNMKLSPLPAAAPPAL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggccgagactgcggcgggattctgccgcttcaaagccaactatgctgttgagcggaag
attgagcccttctacaagggcgggaaggcacagctggaccagactggccattacctcttc
tgtgtctgtggtaccaaagtgaacatcctggatgtggcctcaggggctttgcttcagagc
ctggagcaggaggaccaagaggacattactgcctttgacctcagtcctgatgatgaagta
ctggtaacagccagccgtgcactgctgctggctcagtgggcctggcgagaaggcacggtc
actcgcctatggaaggcgatacacacagctcctgtggcctccatggcttttgatgccacc
tctacactgttagccacaggtggctgtgatggggctgtacgtgtctgggacattgtgcag
cattatgggacacaccactttcgaggctcgcctggtgttgtgcatttggtggccttccat
cccgaccccacccgcctgctgctcttctcctcagctgtggacacctctgtccgcgtgtgg
tcactgcaggaccgctcgtgtctggctgtcctgactgcacactatagtgctgtcacttct
ctgtcctttagtgaggatggccacactatgctcagctctggccgtgataagatctgcata
gtttgggaccttcagagctaccagactacaaggacggtgccagtgtttgagagcgtggaa
gcctctgtgctactgcccgaacatccggcacccgcgctgggtgtgaagagctcaggtcta
cacttcttaacagctggtgaccaagggatccttcgtgtgtgggaggccgcttctgggcag
tgtgtatacacccagccacaaatgccaggcctacagcaggaactgacccactgtaccctg
gcccgtgctgctggcctgctcctcactgtcactgccgatcacaacctgctactctatgag
gcacattccttacagttgcagaaacagtttgctggctatagcgaggaagtattggatgtt
cggttcctgggacccaatgactcccacatcatcgtggcttccaacagcccttgcctgaag
gtgtttgagctgcagactttggcctgtcagatcctccatggtcacacagacattgtcctg
gccctggatgtgttccggaaggggtggctctttgccagctgtgccaaggatcagagcata
cgcatctggaagatgaacaaggctggccaggtggcctgtgtagctcagggttctggccac
acacacagtgtgggcaccatctgctgttctaggctaaaagaatctttcctggtgacgggc
agtcaggactgtactgtgaagctctggcccctccctgaagttctgctctccaagaacaca
gctgaggacagtggccccatgcttctacaagcccagaccactcagcgctgccacgacaaa
gacatcaacagtttggcagtctcccccaatgacaagctgttagcaacaggctcacaggat
cgcacagctaagctctgggccttgcctcagtgccaactgttaggtgtttttacaggccac
cgacgtggcctctggaatgtccagttctcacctacggaccaggtgctggccacagcctct
gctgatggcaccatcaagctctgggcactgcaggacttcagttgtctcaagacatttgag
ggacatgatgcttctgtactgaaggtggcctttgtgagccgtggctcacagctgctgtcc
agtggctctgacgggctcctgaagctgtggaccattaagagcaacgagtgtgtgcggacc
ctggatgctcacgaggacaaggtctgggggctacattgcagccgactggacgatcgtgcc
atcactggtggcagtgactcccgaatcattctctggaaggatgtgacagaagctgagcag
gcagaagagcaggccaaacgggaagagcaggtgatcaagcagcaagaactggacaacctg
ctccatgagaagcggtatctccgggcactaggcctcgccatctctctggatcgtccccac
acggtgctgactgttatccaggccatcaggagggatcctgaggcctgtgagaagctggaa
gccactgtactccgactgcgaagagaccagaaagaggccctgctgcgcttctgtgtcacg
tggaacacaaattccagacactgccatgaagcccaggctgtgcttggtgtgctgctgcgg
catgaggctcctgaggaactgctggcctacgatggggtgcggggagcactggaggccttg
ctgccctacactgagcggcactttcagcggcttagcaggacactgcaagcagccaccttc
ctggacttcctgtggcacaacatgaagctgtccccactccctgctgcagctcccccagcc
ctgtga
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