Mus pahari (shrew mouse): 110338006
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Entry
110338006 CDS
T05929
Symbol
Stxbp5
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110338006 (Stxbp5)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110338006 (Stxbp5)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
110338006 (Stxbp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_Prp19
WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
MIOS_WD40
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
110338006
NCBI-ProteinID:
XP_021076807
Ensembl:
MGP_PahariEiJ_G0023729
LinkDB
All DBs
Position
21:complement(34066145..34207122)
Genome browser
AA seq
1116 aa
AA seq
DB search
MRKFNIRKVLDGLTAGSSSASQQQQQQQHPPGNREPEIQETLQSEHFQLCKTVRHGFPYQ
PSALAFDPVQKILAVGTQTGALRLFGRPGVECSCQHDSGAAVIQLQFLINEGALVSALAD
DTLHLWNLRQKRPAVLHSLKFCRERVTFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGY
VIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEA
IHSVAWHHEGKQFICSHSDGTLTIWNVRSPAKPVQTITPHGKQLKDGKKPEPCKPILKVE
LKTTRSGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYPNDF
QEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLSIHESPVTCCEYFADCPVDLIPALYSV
GARQKRQGYSKKEWPINGGNWGLGAQSYPEIIITGHADGSVKFWDASAITLQVLYKLKTS
KVFEKSRNKDDRQNTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVLTEV
IPMLEVRLLYEINDVETPEGEQPPPLSTPVGSSNPQPIPPQSHPSTSSSSSDGLRDNVPC
LKVKNSPLKQSPGYQTELVIQLVWVGGEPPQQISSLALNSSYGLVVFGNCNGIAMVDYLQ
KAVLLNLSTIELYGSNDPYRREPRSPRKSRQPSGAGLCDVTEGTVVPEDRCKSPTSAKMS
RKLSLPTDLKPDLDVKDNSFSRSRSSSVTSIDKESREAISALHFCETFSRKTDSSPSPCL
WVGTTVGTAFVITLNLPPGPEQRLLQPVIVSPSGTLLRLKGAILRMAFLDATGCLMPPAY
EPWKEHNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQYAVICSEKQAKVISLPTQNCAY
KQNITETSFVLRGDIVALSNSVCLACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIART
FCFANNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGG
AQSLDREELFGESSSGKASRSLAQHIPGPGGIEGVKGAASGVVGELARARLALDERGQKL
SDLEERTAAMMSSADSFSKHAHEMMLKYKDKKWYQF
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaattcaacatcaggaaggtgctggacggcctgaccgcgggctcgtcctcggcc
tcgcaacagcagcagcagcagcagcacccgcctgggaaccgggagccggagatccaggag
acgctccagtccgaacacttccaactctgcaagactgttcgccatggattcccctatcag
ccctcagccctggcctttgatcccgttcagaagatcctggcggtaggaactcagactggt
gctttaaggctctttggtcgtccaggagtggaatgttcctgccagcacgacagtggagca
gcagtgatccaactccagttcctgattaatgagggagcccttgtgagtgccttggctgat
gacaccctgcacttatggaatttacgtcaaaaacggcctgccgtgctacactcacttaaa
ttttgcagagaaagggttacattttgccatctgcctttccagagtaagtggctctatgtg
ggcactgagcgaggtaacatacacattgtcaatgtggagtccttcacactctcaggctat
gtcattatgtggaataaagccatcgaactgtcatctaaatctcacccaggacctgttgtg
catataagtgataatcccatggacgaggggaagcttttgattggctttgaatctggaaca
gtagtcttatgggacctcaagtcaaagaaggctgactacagatacacatatgatgaggct
attcactctgtggcttggcatcatgaaggaaaacaatttatttgcagtcattctgatggt
actttgaccatatggaatgtgaggtcccctgctaaacctgtacagaccatcactcctcac
ggaaaacagttgaaggatgggaagaagccagagccatgcaagcctatcctgaaggtggag
ttgaagacaacaagatccggggaaccttttattattttgtcgggaggcttatcctatgat
accgtgggaagaagaccttgcttaacagtgatgcacgggaaaagcacagcagtgctggaa
atggactattcaatcgttgactttctcacactctgtgaaacgccatatccaaacgatttt
caggaaccgtatgctgtggttgttctcctggaaaaggacttagtgctaatagaccttgca
caaaatggataccctatatttgagaatccctaccctttgagtatccatgagtcccccgtc
acatgttgtgaatattttgctgattgtcctgtggaccttattcctgcactttactctgtt
ggagctagacagaaacgtcaaggttacagcaaaaaggaatggcccatcaatggtggtaat
tggggcttgggtgctcaaagttacccagaaataattattacagggcatgccgatgggtcg
gtgaaattctgggacgcttctgcaataactctacaagtactgtataaattaaaaacgtct
aaagtatttgagaagtcaagaaacaaagatgacagacagaacacggacattgtagatgaa
gatccatacgccattcagatcatctcctggtgcccagagagcaggatgctgtgcatagct
ggagtgtcagcccatgtcatcatctataggttcagcaaacaggaagtgcttacagaagtc
attccgatgcttgaagttcgactgttatatgaaataaatgatgtggaaacaccagagggt
gagcagcctccacctctgtccacccccgtgggcagctccaaccctcagcccattcctcct
cagtctcatccgtctaccagcagcagctcatctgatgggcttcgtgataatgtaccttgc
ttaaaagttaaaaactccccacttaagcagtctccaggctatcagacagagctggtcatt
cagttggtgtgggtgggtggagagcccccgcagcagatcagcagcctggcactcaactct
tcctatggactggtggttttcggcaactgtaacggcatcgcaatggttgactacctccag
aaagcagtactgctcaacctcagcaccattgaactctacggctcaaatgatccttatcgg
agagaacctcggtcgccccgtaaatctcgacagccttcaggagcgggcctgtgtgatgtc
accgaagggactgtcgtcccagaggatcgctgcaagtctcccacttccgcaaagatgtca
aggaaattaagcttgccaactgacctaaagcctgatttagatgtaaaagacaattccttc
agcagatctcggagttcaagtgtaaccagcattgacaaagagtcccgggaagccatctct
gctcttcatttctgtgagactttctctcggaagaccgactcttccccgtccccatgtctg
tgggtcggaactacagtgggaactgcatttgtcatcacgctgaatctccccccggggcct
gagcagagactccttcagccagtgattgtgtctccaagcggtactctattgcggttgaaa
ggtgcaatcttgaggatggcatttctggatgccacgggctgcttaatgcctcctgcatac
gaaccctggaaagaacacaacgttcctgaagaaaaagacgaaaaggagaaattgaaaaag
cggcgacctgtctcagtatccccctcctcttctcaggaaattagtgaaaaccagtacgca
gtgatatgctctgaaaagcaagcaaaggtcatctcactgccaacccagaactgtgcgtac
aagcagaacatcaccgagacgtccttcgtgctccgcggagacattgtcgcactgagtaac
agtgtctgcctcgcctgcttctgtgccaatggccatatcatgactttcagtttgccaagt
ttgagaccactcctggatgtctactacctgccccttaccaacatgcggatagccaggaca
ttctgcttcgccaacaatggacaagccttataccttgtttcgcctacggaaatccagaga
ctcacctacagtcaggagacatgtgaaaatcttcaggagatgctcggtgaactcttcacg
cctgtagaaacaccagaagcaccaaacagagggttcttcaaaggcttatttggaggcggt
gcacaatctctcgatagagaagaactatttggagagtcgtcctcgggaaaggcctcaagg
agcctcgcacagcacatcccgggccctggtgggatcgaaggtgtgaaaggagccgcgtcg
ggagtggtgggtgaacttgcccgagccaggctggccctcgacgaaagaggccagaagctt
agtgacttagaagagaggacggcagctatgatgtccagcgcagactcgttttccaaacat
gctcatgagatgatgctgaaatacaaagataagaagtggtaccagttctga
DBGET
integrated database retrieval system
