Mus pahari (shrew mouse): 110338047
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Entry
110338047 CDS
T05929
Symbol
Tbp
Name
(RefSeq) TATA-box-binding protein isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03022
Basal transcription factors
mpah05016
Huntington disease
mpah05017
Spinocerebellar ataxia
mpah05165
Human papillomavirus infection
mpah05166
Human T-cell leukemia virus 1 infection
mpah05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110338047 (Tbp)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110338047 (Tbp)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110338047 (Tbp)
05165 Human papillomavirus infection
110338047 (Tbp)
09164 Neurodegenerative disease
05016 Huntington disease
110338047 (Tbp)
05017 Spinocerebellar ataxia
110338047 (Tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110338047 (Tbp)
03021 Transcription machinery [BR:
mpah03021
]
110338047 (Tbp)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
110338047 (Tbp)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110338047 (Tbp)
RNA polymerase III system
TFIIIB
110338047 (Tbp)
RNA polymerase I system
SL1/TIF-1B
110338047 (Tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
TFIIA
Presenilin
Motif
Other DBs
NCBI-GeneID:
110338047
NCBI-ProteinID:
XP_021076890
Ensembl:
MGP_PahariEiJ_G0023411
LinkDB
All DBs
Position
21:10987773..11005609
Genome browser
AA seq
318 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQQQQQQQQQQQAVATAAASVQQSTSQQPTQGASGQTPQLFHSQTLTTAPLPGTTPLYPS
PMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVI
MRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGS
CDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEI
YEAFENIYPILKGFRKTT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaacaacagccttccaccttatgctcagggcttggcctccccacagggcgcc
atgactcctggaattcccatctttagtccaatgatgccttacggcacaggtcttactcca
cagcccattcagaacaccaacagtctctctattttggaggagcaacaaagacagcagcag
cagcagcaacagcagcagcagcagcaacaacagcaggcagtagccactgcagcagcctca
gtacagcagtcaacatctcagcaacccacacagggtgcctcaggccagaccccacaactc
ttccattctcaaactctgaccactgcaccgttgccaggcaccacccccttgtacccttca
ccaatgactcctatgacccctatcactcctgccacaccagcctctgagagctctgggatt
gtaccacagcttcaaaatattgtatccactgtgaatcttggctgtaaacttgacctaaag
accattgcacttcgtgcaagaaatgctgaatataatcccaagcgatttgctgcagtcatc
atgagaataagagagccacgaacaaccgcattgattttcagttctgggaaaatggtgtgc
acaggagccaagagtgaagaacaatccagactagcagcaagaaaatacgctagagttgtg
cagaagttgggcttcccagctaagttcttagacttcaagatccagaacatggtggggagc
tgtgatgtgaagttccccataaggctggaaggccttgtgttgacccaccagcagttcagt
agctatgagccagaattatttcctggattaatctacagaatgatcaaacccagaattgtt
ctccttatttttgtttctggaaaagttgtattaacaggtgctaaagttagagcagagatt
tatgaagcctttgaaaacatctaccccatcttaaagggattcaggaagaccacatag
DBGET
integrated database retrieval system
