Mus pahari (shrew mouse): 110338099
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Entry
110338099 CDS
T05929
Symbol
U2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110338099 (U2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpah03041
]
110338099 (U2af1)
Spliceosome [BR:
mpah03041
]
Complex A
U2 snRNP components
U2 related factors
110338099 (U2af1)
Complex B
110338099 (U2af1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
110338099
NCBI-ProteinID:
XP_021076975
Ensembl:
MGP_PahariEiJ_G0023691
LinkDB
All DBs
Position
21:complement(26648066..26658680)
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AA seq
239 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatacttggcctccatcttcggcaccgagaaagacaaagtcaactgttcattt
tatttcaaaatcggagcatgtcgtcatggagacagatgttctcggttacacaataaaccg
acctttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagtgacgtggagatgcaggagcactatgatgag
ttctttgaggaagtcttcactgagatggaagaaaagtacggggaagttgaggagatgaac
gtctgtgacaacctaggagaccacctggtggggaacgtgtatgtcaagtttcgacgtgag
gaggatgcggagaaagccgtgattgacttgaataaccgctggtttaatgggcagccgatc
catgcagagctgtccccagtaactgacttcagggaagcctgctgtcgccagtatgaaatg
ggagagtgcacaagagggggcttctgcaacttcatgcatttgaagcccatctcaagagag
ctacgacgggagctgtatgggcgccggcgcaagaagcatagatccaggtcccgatccagg
gaacggcgttcccgatccagagaccgtgggcgcggtggtggaggtggaggtggaggtggc
ggaggacgggagcgtgacaggaggcggtcaagagaccgggagagatctggacgattctga
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integrated database retrieval system
