Mus pahari (shrew mouse): 110338105
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Entry
110338105 CDS
T05929
Name
(RefSeq) ATP-binding cassette sub-family A member 17
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110338105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110338105
Transporters [BR:
mpah02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110338105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_23
AAA_15
AAA_22
AAA_29
Arf
AAA_25
Paramyxo_C
Motif
Other DBs
NCBI-GeneID:
110338105
NCBI-ProteinID:
XP_021076987
Ensembl:
MGP_PahariEiJ_G0023496
LinkDB
All DBs
Position
21:complement(19211462..19295598)
Genome browser
AA seq
1728 aa
AA seq
DB search
MAVLKKLKLLLWKNFILKRRKTLITLLEMLMPLLFCAIVLYLRLNSMPRKKSSTNYPAVD
VSLLPVYFYNYPLKSKFQLAYIPSKSETLKAVTEVVEQTFAVDFEVLGFPSVPSFEDYII
KDPKSFYILVGIIFHHYFNSSNDPLPLVVKYDLRFSYVQRNFVSPPRHLFFQEEIEGWCT
AFLYPPNLSQAPREFSYADGGNPGYNKEGFLAIQHAVDKAIMRHHTPQAALNMFRNLHVL
VQRFPLGPHIQDPFLVILQNEFPLLLMLSFVCVELIITNSVLLEKERKQKEYMCMMGVES
WLHWVAWFITFFVSVLITVSVMTVLFCTKINRVAVFRNSNPTLIFIFLMFFAIATIFFAF
MMSTFFQRAHVGTVMGGTVFFFTYLPYMYITFSYHQRTYTQKILSCLFSNVAMAMGVRFI
SLFEAEGTGIQWRNIGSVWGDFSFTQVMGMLLLDSLLYCLVAVLVESLFPGKFGIPKSWY
IFAKKPVPAIPPLLNIGDPEKPSKGDFMQDEPMNQMNTIEIQHLYKVFYTGRNKRTAIKD
LSMNLYKGQITVLLGHNGAGKTTICSVLTGLITPSKGHVYIHGYEISKDMVQIRKSLGWC
PQHDILFDNFTVTDHLYFYAQLKGLSPQNCHKKIEEMLHILGLEDKRDSRSKFLSGGMKR
KLSIGIALIAGSKVLILDEPTSGMDAVSRRAIWDLLQQQKSGRTVLLTTHFMDEADLLGD
RIAILAKGELQCCGSSLFLKQKYGAGYYMTIIKTPLCDTSKLSKVIYHHIPNAILESSIG
EEMIFTLPKKTTPRFEALFTDLELRQTELGISTFATSVTTMEEVFIRVCKLADPSTNVLT
EKRHPLPRHHRIPVDRIKCLHSRIFSVSTEQPMRLNTGFCLLCQQFYAMLLKKVTYSRRN
WMLVLSVQLLLPLAIVMLSLTFFNFKLRKLDNVPLELTLQMYGQTIVPFFIAENSHLDPQ
LSDNFVKMLVAAGQVPLRIRGSVENFLLKKAKEAPEDFDKLYVVAASFEDVNNHTTVKAL
FNNQAYHSPGLALALVDNLLFKLLSGTNASITTTNYPQPQTAIEVSESILYQGPKGHYLV
VNFLFGIAFLSSSFSILTVGEKSVKSKSLQFASGVNMAVFWLSALLWDLISFLIPTLLVV
LVFLWYEEEAFAHHENIPAVVLIMMLYGWAIIPLVYTVSFSFNTPGSACVKLVVMLAFLS
ISPVVLVTVTSEKDLGYTELSDSLDHVFLILPGHCLGMALSNLYYNFELKKFCNAKNLSD
IDCNDVLEGYVVQENIYAWESLGIGRYLTALAVLGPVYITLLFLTEASAFYVLKSRLSGF
FPSFWKEKSGMIFDVKEPEDEDVLEETETIKRYLETLIKKTPLVVKEVSKVYNEKAPLLA
VNKVSFVVKEEECFCLLGLNGAGKTSVFNMLTSEQPVTSGDAFIKGFSIKSDIVKVRQWI
GYCPEFDALLNFMTGREMLVMYARIRGIPECHIKACVDLILENLLMCVCADKLVKTYSGG
NKRMLSTGIALVGEPAVILLDEPSTGMDPVARRLLWDTVARARESGKAIVITSHSMEECE
ALCTRLAIMVRGQFKCLGSPQHLKSKFGSGYSLQAKVRSEGKQEVLEEFKAFVDLTFPGS
NLEDEHQNMVQYCLPDPDLSWAKVFSIMEQAKKDYMLEDYSISQLSLEDIFLNFTRPESS
TKEKIQQGQAVPASPLPPSRPISSPPSQLSSQPPKPLPSPPPSEPVLL
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgttgaagaagttaaaacttcttctctggaagaatttcatcttaaagaggcgg
aagaccctgatcactctcctggagatgctgatgccattattgttttgtgcaattgtattg
tatcttcgtttgaatagtatgccaagaaagaagtcatctaccaactacccggcagttgat
gtcagtttactgccagtatacttctataactatcctctgaaaagtaaatttcagttggct
tatatcccttccaaaagtgaaaccttgaaagctgtcacggaagtggtggagcaaaccttt
gctgttgactttgaagttctaggctttccttcagtgccttcatttgaagactatataatt
aaggatcccaagtctttctacatactggtgggaattatttttcaccattacttcaatagc
agcaatgaccctttgccacttgtggtgaagtatgacttgcgctttagttatgttcagagg
aactttgtatcaccgccgaggcatttattttttcaagaggagatagaaggctggtgcaca
gcctttctttacccacctaatctaagccaagcaccccgggaattttcatatgctgatggg
ggaaaccctggctacaacaaagaaggcttcttggccatacagcatgccgtagacaaagcg
attatgcggcaccacaccccccaagcagcacttaacatgttcaggaacctccacgtcttg
gtgcagaggttcccacttgggccccatatccaggacccattcttagtgatccttcagaat
gagttccctctgctcctcatgctcagcttcgtctgtgttgagctcataatcaccaattcc
gttttgttggagaaggagaggaaacagaaggaatatatgtgtatgatgggagtggagagc
tggctgcactgggttgcttggttcatcacgtttttcgtttctgtcttaattaccgtgtct
gttatgactgtccttttttgcacaaagataaacagagtggctgtgttcaggaacagtaac
cctaccctgatatttatttttctaatgttttttgccatcgccacaattttctttgcattc
atgatgagcacattcttccaaagagcccacgtgggaactgtgatgggcggcaccgtcttc
ttcttcacttatcttccctacatgtacatcactttcagttaccaccagaggacttacacc
caaaagatactctcttgcctcttctccaatgttgccatggcaatgggagtccggttcata
tctctgtttgaagcagaaggcacaggcatccaatggaggaacataggcagtgtctgggga
gacttcagcttcacgcaggtgatggggatgctcttgctggactcccttttgtactgtctg
gtagctgttctggtggagtctctcttcccaggaaagtttggaatacctaagtcttggtac
atctttgccaagaagcccgttccagccataccaccacttttgaatattggggatcctgag
aaaccgtcaaaaggggatttcatgcaggacgagccaatgaatcagatgaatacaattgag
atccaacatctgtataaggtgttctatacgggaagaaataaacgtacagccatcaaagat
ctgagcatgaacctgtacaaggggcagatcactgttcttctgggacacaacggagcaggg
aaaaccaccatctgctctgttctgacaggtctcattactccttcaaaaggacatgtatat
atccatggatatgagatttcaaaagacatggttcaaattaggaagagcctgggttggtgc
ccacagcatgacattttatttgataactttacagtaactgaccacctttatttctatgct
cagttgaaaggtctctctcctcagaactgtcacaagaaaatagaggagatgctgcacatc
ctcggtctggaggacaagcgggactcaaggtccaagttcctgagtgggggcatgaagcgc
aagctctccattggcatcgccctcatagcaggctctaaggtattgattctggatgagccc
acctcaggcatggacgcagtgtccaggagggccatctgggaccttctccagcagcagaag
agtggccgcaccgtcctgctgaccactcacttcatggacgaagctgacctgctgggagac
cgcatcgccatcttggccaagggggagctccagtgctgcgggtcttcactgttcctcaag
cagaagtacggtgcaggatattatatgactataataaaaacacctctctgcgacacctca
aagctctctaaagttatttatcaccacataccgaatgcaatcttggagtccagcattgga
gaagaaatgatattcacacttcctaagaagaccacacccaggtttgaggccctattcact
gacttggaactgagacagacagagctgggaatctctacttttgccacctctgtcaccact
atggaggaagtgtttatacgagtttgtaagttggctgatcccagcacaaatgtcttaacc
gagaagcgacatcctcttccccggcatcacagaattcctgttgacagaattaagtgtctc
cactcaaggatcttctcagtgagcactgaacagccaatgagactaaacacaggcttctgc
cttctctgccagcaattctacgccatgctcttgaaaaaggtcacgtattctcggcgcaac
tggatgctggtgctctctgtgcagctcctgctgccgctggcgatcgttatgttaagcctc
accttcttcaacttcaaattaaggaaactggataacgtgcccctggagctgaccttacaa
atgtatggccagaccattgttccattttttattgctgagaattcccacctggatcctcaa
ctttcagataactttgtaaaaatgcttgtggccgcaggacaggttcctttgcgtattcga
ggttctgtagagaacttcctactgaagaaggcaaaggaggctcctgaggactttgataag
ctctatgtggtggcagcttcttttgaagatgtgaataaccacacgacagtgaaggcgctg
ttcaacaaccaagcataccactcccctggcctggctctggctctggtggacaatcttctc
ttcaagttactttctggcaccaatgcttccattactacaaccaactatcctcagcctcag
acagccatagaggtctcagagtcgatcctataccagggccctaaaggacactaccttgtt
gtcaactttctttttggaatagctttcctgtcaagctccttttccatcttgacggtcgga
gagaagagcgttaagtctaagagcctccagtttgcgagtggagtcaacatggctgtgttc
tggctctcagctctgctgtgggacctcatctctttcctcattcccactctgctggtggtg
ctggtgtttctgtggtatgaggaagaagcttttgcacaccacgagaacatcccagcagtg
gtcttgataatgatgctctacggctgggctatcatccctttggtgtacacagtcagcttc
tcctttaacactcccggcagtgcgtgtgtgaagctcgtggtgatgctcgccttcctgagc
atcagccctgtggtcctcgtcaccgtcaccagtgagaaagatcttggttacacggaactc
tcagactccttggatcacgttttcctaattcttcctggacattgcctgggaatggccttg
tccaacttgtactataactttgagctgaaaaagttttgcaatgctaagaacttgagtgat
attgactgcaatgatgttttagaaggatatgtggtccaagagaacatctatgcctgggaa
tctctggggataggaaggtacctgacagccctggccgtcttaggacctgtatacatcacc
ctgcttttcctcactgaagccagtgcattctatgtcctgaaatccaggctctctggtttc
tttccttccttctggaaagaaaaatcggggatgatctttgatgtgaaagaacctgaagat
gaagatgttttagaggagacagaaaccatcaagcgttatttggaaacgttaataaagaaa
accccacttgttgttaaagaagtgtcaaaggtctacaacgagaaggctcccctgttggct
gtgaacaaggtgtcctttgttgttaaggaggaggagtgcttttgccttcttggtctcaat
ggagctgggaagacttccgttttcaacatgctgaccagcgagcagcctgtcacttccggg
gatgcctttatcaagggtttcagcatcaagtctgacatagtgaaggtgcggcagtggatt
ggttactgtcctgagtttgatgccttgctaaacttcatgacaggacgagagatgcttgtc
atgtatgcccgtatccggggcatccctgagtgccacattaaagcctgtgtcgacctgatc
cttgagaacttactcatgtgtgtgtgtgcagacaagctggtgaagacctatagtggtggt
aacaagcgcatgctaagcactggcattgccctcgttggagagcctgcagtcatcctgcta
gatgaaccatccactggcatggaccccgtggcccggcgtctactctgggacactgtagct
cgggcccgagagtctggcaaagccatcgtcatcacctcccacagtatggaagagtgtgaa
gccttatgtacccggctggccatcatggtacggggccagttcaagtgcctgggcagcccg
cagcacctcaagagcaagtttggcagcggctactccctgcaggccaaggtccggagtgag
gggaagcaagaagtgctagaggagttcaaggcctttgtggacctgaccttcccaggcagc
aatctggaagacgagcaccagaacatggttcagtactgcctgcctgacccagacctcagc
tgggccaaggtgtttagcattatggaacaagccaagaaggactacatgttggaagactac
tccatcagccagctatccctggaggacatcttcctgaacttcaccagaccagagtcctcc
actaaagaaaagatccaacaagggcaagctgtcccggccagccccttaccaccctctagg
cctatctcgagtcctccatcacagctttcttctcagcctcccaaaccacttccatctcca
cctccctcagagcctgtccttctgtaa
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integrated database retrieval system
