KEGG   Mus pahari (shrew mouse): 110338164
Entry
110338164         CDS       T05929                                 
Symbol
Nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03013  Nucleocytoplasmic transport
mpah05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110338164 (Nup43)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110338164 (Nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110338164 (Nup43)
   03036 Chromosome and associated proteins [BR:mpah03036]
    110338164 (Nup43)
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110338164 (Nup43)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110338164 (Nup43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EIPR1 WD40 Beta-prop_EML Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st EIF3I Beta-prop_SPT8 T4_tail_cap KNTC1_N Beta-prop_CAF1B_HIR1
Other DBs
NCBI-GeneID: 110338164
NCBI-ProteinID: XP_021077082
Ensembl: MGP_PahariEiJ_G0023718
LinkDB
Position
21:32058956..32069734
AA seq 379 aa
MEEIYAKFVSQKISKTRWRPVPSGSLQTTETFATGSWDNEENCVSLWSIGDFGNLDSDGG
FEGDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVFLHHPNNQTLSVNQQWPAAHY
HTGPGSPSYSSAPCTGIVCDNPEIVTVGEDGRINLFRVDHKEALRTIDNADSSTLHAVTF
LRTPEIVTVNSIGQLKIWDFRQQGSEPCQILSLTGDRVPLHCVDRHPDQQHVVATGGQDG
MLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSSPDHLFTCSEDGSLWHWDASTNAPEKSS
LFHQGGRSTFLSHSISNQAGVHQSLVSSWLSTDPAKDRIEITSLLPSRTLSVNSLDVLGP
CLVCGTDAEAIYVTRQLFS
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggaggaaatttatgctaagttcgtgtctcagaaaattagcaaaacccgctggcggcca
gtgccttccgggagcctgcagaccacagagacctttgccacgggctcctgggacaatgag
gaaaattgcgtttcactgtggtctattggagattttggaaacttggattctgacggaggg
tttgaaggagaccatcaattactgtgcgatattagacatcatggggatgtcatggattta
cagttttttgaccaggaaagaattgtagctgcttcatcaacaggatgtgtaacagttttt
cttcaccatccaaataaccagactctgtccgtcaatcagcagtggcctgcagctcattac
catacaggtccgggaagtccctcctatagcagtgcaccatgtacaggaattgtgtgtgac
aacccagaaattgttacagttggagaggatggccgaatcaatctcttcagagttgaccac
aaggaggctctcagaactatagataatgcagacagcagtacactccatgctgtaaccttc
cttcgaactcctgagattgttacagtaaattcaattggacagttaaaaatatgggatttc
agacaacaaggaagtgagccctgtcagatactatcactgactggtgaccgagtgccactc
cactgtgttgacagacatccagaccagcagcatgttgtagctactggtggccaggatgga
atgttgagtatttgggatgtcagacaaggtaccatgcctgtgtcgttactgaaggctcat
gaggctgaaatgtgggaggtgcacttccacccatccagcccagaccacctgtttacctgt
tctgaggatgggtccctctggcactgggacgcctccacaaacgcgcctgaaaagtcttct
ctcttccaccaaggaggaagaagtacttttctgtcacatagcataagtaaccaggccggt
gttcaccagtctctagttagttcctggctcagcacagaccctgccaaagacagaattgaa
atcacaagcttgcttcccagcaggactctgtctgtaaacagtttggatgttttaggtccc
tgtcttgtttgtggaactgacgcagaagccatttatgttaccaggcaactattttcatga

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