Mus pahari (shrew mouse): 110338674
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Entry
110338674 CDS
T05929
Symbol
Topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110338674 (Topors)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110338674 (Topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mpah03037
]
110338674 (Topors)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110338674 (Topors)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110338674 (Topors)
UBL E3 ligases
110338674 (Topors)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
110338674 (Topors)
Cilium and associated proteins [BR:
mpah03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110338674 (Topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
110338674
NCBI-ProteinID:
XP_021077715
Ensembl:
MGP_PahariEiJ_G0024017
LinkDB
All DBs
Position
22:complement(46102160..46112229)
Genome browser
AA seq
1036 aa
AA seq
DB search
MGSQPPPPGSPLSREEGEAPPLVPAEEGRRRSRRVRLRGSCRHRPSLLSRRELTSSGPAD
PAAASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRC
LHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFTNPEVRRF
RYRTTMTRERSASLYSPSSTVSRRTTTPPDSGVLFEGLGISTRPRDVDIPQFMRQMALRG
PTTTDERSLRKIQEQDIINFRRTLYRAGVRVRSIEDGGRYRDISAEFFRRNPACLHRLVP
WLKRELTVLFGTHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISF
ARSPFNMAAFDQHANYDCPPSSEGSRSDSSVITISPDEAETQELDMNVSTVRQAPWDDET
PGPSYSSSEQVHVGVSSLLNSSDSSDEELVSGVTTSQIQGVQTNDDVNNDSDSSSDNCVI
VGFVKPLAERTPELVELSSDSEELGPYEKVETERTQEQEQSYSSGDSDVGRSSSPHSVLG
KDEQMSKSHCDSDTRINSKKEEKRSTSLPAPRDSSSTRGDRVCSPYNHRHRKGGRSRSSD
SRSQSRSGHDQRNHRKHHGKKRLRNKRSRSRESSSRPRARKDKKRSRTRDSSWSRRSQTL
SVSSGSTSRSRSRSSDRGKRRSRSRNRDRYYLRNNYGSKYKWEYTYYSRNKDRDGYESSY
RRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNHSERKYYYYERRRSRSVSSNRSRTTS
TGPDRVRSEKPGGKRKYKTRHLEGTSEEAQPTQEFASKGKEGHYQKSKLDGSYKNESDSF
SDSRSSDRETKHKRRKRRTRSLSVEIVYEGKATDTSKHHKKKKKKHKKKHKKHHGDNSSR
SPVVITIDSDSDGDSEVKAGFECSNSSLPQPIQDEVLTPSSEAFETKDIVTIEDELGVLD
KECDVTALTDDLSTSQTVENSDSPAVLVEQTLDVREESTFASDLESQSSNVSIQTEPSRP
VPSPRTSLSSVSPGRD
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagccgccgcctccggggtctccgctgtctcgcgaggagggtgaagcgccc
cctctggtgcccgccgaggaggggaggcgccgaagccgccgggtacgccttcgcggatcc
tgccgccacaggccgagcctactgagccggcgggagctgacttccagcggcccagcggac
cccgccgccgcgtcctcggagataatggcctcagctgctaaggaatttaaaatggacaac
ttttcacctaaagctggcactagcaaactgcaacagacagtaccagctgatgcatctcct
gattctaagtgtcctatatgcttggatagatttgataatgtgtcttacttagatcgttgc
ctacataagttctgttttcgctgtgtacaagagtggtccaaaaacaaagccgaatgccca
ctgtgtaaacagccctttgattctattttccattctgtgagggctgaagatgacttcaag
gagtatgtcctgaggccttcctataatggttcctttactaaccctgaggttcgaaggttt
cgctaccggacaactatgacgagagagcggagtgcctctctttattcacccagtagtact
gtaagtaggagaacaaccacaccaccagatagtggagtactgtttgaagggttaggcatt
tcaacaagacctagagatgttgacattcctcaatttatgagacaaatggcattaaggggg
ccaactactacagatgagagatctttacggaaaattcaagaacaagatattattaatttc
aggcgaactctttatcgtgctggtgttcgagttagaagtattgaagatggtggccgctac
agggatatttcagctgagttcttccgtagaaatccagcttgccttcacagattggttcct
tggttaaaacgtgaacttactgttctttttggaacccatggttcgttagtcaatattgtc
cagcacatcatcatgagtaatgttactcgctatgatttggagagtcaggcatttgtgtct
gacttaagaccatttttgcttaatcgaactgagcattttatacatgaatttatcagtttt
gctagatctcccttcaatatggcagcttttgaccagcatgctaattatgattgccctcct
tcgtctgaaggcagccgttctgattcttcagtcattaccatatcaccagatgaggctgaa
actcaagagctagatatgaatgtatctactgttaggcaggcaccatgggatgatgaaact
cctggaccatcttattcaagttcagagcaagtgcatgttggcgtgtcttcccttttaaat
tcttcagacagttcagatgaagaacttgtctctggagtaaccacatctcagatacaagga
gtacagaccaatgacgatgtcaataacgacagtgattcatcgtcagataattgtgtcatt
gttgggtttgttaagccattagctgaaaggaccccggaacttgtggaactgtcttctgat
tctgaggagttgggcccttatgagaaagtggagacagagaggacacaagaacaagagcag
tcctacagttcaggtgacagtgatgttggccggtcgtcatctccacattctgtcctcgga
aaagatgaacaaatgagtaaaagccattgtgattctgacacaagaataaactcaaagaaa
gaagagaaacgatctacatcattgccagctcccagggacagctcatctacaagaggtgac
agggtatgctccccatataaccatagacacaggaagggaggaaggtcgaggagttcagat
tcccgttcccagagtagaagtggccatgatcagaggaatcataggaagcaccatgggaag
aaaagattgaggaataagaggtccagaagtagggagagcagtagcaggcctagagcaaga
aaggacaaaaagaggtcaagaactagggatagcagctggtcacgaagaagccagacactt
tctgtaagtagtggaagcaccagtagatcgcggtctcgtagcagtgatcggggcaaaaga
agatcacgaagcagaaatcgagatcgctattatttaagaaataattatggaagcaaatat
aagtgggaatatacttactacagcagaaacaaggacagagatgggtatgagtcatcgtac
aggaggaggactctttcaagagcccattactctaggcaatcttcaagtccagaatttaga
attcagtctttttctgaaagaacaaatgcgaggaagaagaatcatagtgaaaggaaatac
tactattatgaaaggcgccggtccaggagtgtgtccagtaacaggtcgaggactacatcc
accgggcctgaccgcgtgaggagtgagaagccgggagggaaacgcaagtacaaaacccgg
catttggaaggtaccagtgaagaggctcaaccgactcaggagtttgcttccaaagggaag
gagggtcattaccaaaaatcaaaattggatggtagttataaaaatgagagtgacagcttt
tcagatagcagatcatcagacagagagacaaaacacaagaggaggaaaaggaggacccgg
agcctaagtgtagagatagtttatgaaggaaaggctacggacacaagcaaacaccataaa
aagaaaaagaagaaacataagaagaagcataagaaacaccatggagataatagttcacgg
tcgccggttgtcataaccatcgacagtgatagcgatggggattctgaagtaaaggcaggc
tttgaatgtagcaatagcagtcttccacagcctatacaagatgaagtcttgactccttcc
tcagaagcatttgaaactaaagacattgtcacaatagaagacgagcttggtgtcctggac
aaggaatgcgatgttacagcacttactgatgacttgagtaccagccaaactgtggagaac
agtgactccccagcagtcctagttgaacagactcttgatgtaagagaagaaagtaccttt
gcctctgatttagagagccagtccagtaatgtgtctattcagactgaaccatcgagacca
gtgccatctccacggacctcactgtcgtcagtgtctcctggtagagactaa
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