Mus pahari (shrew mouse): 110338736
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Entry
110338736 CDS
T05929
Symbol
Rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110338736 (Rnf38)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110338736 (Rnf38)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110338736 (Rnf38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
110338736
NCBI-ProteinID:
XP_021077797
Ensembl:
MGP_PahariEiJ_G0024108
LinkDB
All DBs
Position
22:complement(48923503..48963105)
Genome browser
AA seq
458 aa
AA seq
DB search
MREISPGANSAPLPGHPNKVICERVRLQSLFPLLPSDQNTAIQEDAHSKAFFQSEDSPSP
KRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPP
VRRQRGRRERLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQN
AVMVDIHDQMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQ
TQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGV
PYPPFMPRRLTGRSRYRSQQPMPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEV
ENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLR
VLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatatctcccggggccaattcagcacctctacctggccaccctaacaaggtg
atttgtgaaagggtgagacttcagagcctgttccctctcctcccaagtgatcagaacact
gccattcaagaggatgctcactccaaagctttcttccagagtgaagatagtccaagtcct
aagagacagcgcctctctcattcagtcttcgattatacatccgcatcaccagctccctca
ccaccaatgcgaccatgggagatgacatcaaataggcagcccccttcagttcgaccaaat
caacatcacttctcaggggaacgatgtaacacacctgcacgcaacagaagaagtcctcct
gttaggcgtcagcgaggaagaagggaacgtctgtctcgacataattccattagtcaagat
gaaaactatcaccatctcccttatgcacagcagcaagcaatagaggaacctcgagccttc
caccctccgaatgtatctccccgtctattacatccagctgcccatccaccccagcagaat
gcagtcatggttgacatacatgaccagatgcttcaggcatgttcagttcagcacttacca
gtaccatatgctgcgttcccgcccctcatttctagtgatccgtttcttatacatcctcct
catctttctccccatcatcctcctcatttgccaccaccaggccaatttgtccctttccaa
acacaacagtcacgatcgcctctgcagaggatagaaaatgaagtggagctcttaggagaa
catcttcaagtaggcagttttacttatcccccttcagcccatcccccaacattacctccg
tcagcacctttgcagttcctgacacatgaccctttgcatcaggaggtgtcctttggagta
ccttatccaccatttatgcctcggagactcacaggacgtagtagataccgatcccagcag
ccaatgccccctcctccttaccatcccagcttactaccatacgtgctatcaatgcttcca
gtaccacctgcagtaggcccaaccttcagctttgaattggatgtggaagatggagaagtt
gaaaattatgaggccctgttaaacttggcagagagactgggagaggcgaaacctcgggga
ctgactaaagcagatattgaacagcttccttcgtacaggttcaatcctagcaaccaccag
tcagagcagactttgtgtgtagtatgcatgtgtgattttgagtcaaggcagcttcttaga
gtcttaccttgtaaccacgagttccatgccaagtgtgttgataaatggcttaagggaaac
cgtacctgcccaatttgcagagctgatgcttcggaagtgcatcgggattcagagtga
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