Mus pahari (shrew mouse): 110338795
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Entry
110338795 CDS
T05929
Symbol
Aptx
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110338795 (Aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110338795 (Aptx)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
110338795 (Aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
110338795 (Aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
110338795 (Aptx)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110338795 (Aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
110338795 (Aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
FtsK_SpoIIIE_N
Glycoamylase
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
110338795
NCBI-ProteinID:
XP_021077901
Ensembl:
MGP_PahariEiJ_G0024020
LinkDB
All DBs
Position
22:complement(46479127..46498306)
Genome browser
AA seq
335 aa
AA seq
DB search
MRVCWLVRQDSRHQRIKLPHLEAVVIGRSPETKITDKKCSRQQVQLKAECNKGYVKVQQM
GVNPTSIDSVVIGKDQEMKLLPGQVLHMVNELYPYIVEFEEVAESTNLTQRKRKRSDCDS
EEMEAESGTGLAPESSPSQCSVSPKKGKDGATKKESLGHWSQGLKMSMKDPKMQVYKDDQ
VVVIKDKYPKARHHWLVLPWASIASLKVVTSEHLELLQHMHAVGEKVIADFAGSSKLRFR
LGYHAIPSMSQVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIKMVQEAGRVTVKD
GTCELLKLPLRCHECQQLLPSIPQLKEHLRKHWGG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgtgctggttggtgagacaggacagccggcaccagcgaatcaaacttccccat
ttggaagctgttgtgattggtcgaagcccagagaccaagatcacagataagaaatgttcc
cgacagcaagtacaattgaaagcagagtgtaacaagggatatgtcaaagtacagcagatg
ggggtcaatcccaccagcattgactcggtcgtcatcgggaaggaccaagagatgaagctg
ctgcctggtcaggttctccacatggtgaatgaactttatccatacatcgtagagtttgag
gaggtggcagagagcactaacctaacacagaggaagagaaagaggtcagactgtgatagt
gaggagatggaagctgagtctgggacagggctggcacctgagagcagccccagccagtgc
tctgtgtcccctaagaagggcaaggatggagccaccaaaaaggaatcactgggccactgg
agtcaaggcttgaagatgtctatgaaagaccccaaaatgcaggtttacaaagacgaccag
gtggtggtgattaaggataaataccccaaggcccgtcaccactggctggtcttaccgtgg
gcctccattgccagtctgaaggttgtgaccagcgaacaccttgaacttctccaacacatg
cacgccgtgggggagaaggtgatagcagattttgctggatccagcaaactgcgcttccga
ttgggttaccatgccattcccagcatgagccaagtacatcttcatgtgatcagccaggat
tttgattctccttgccttaaaaacaaaaagcattggaattctttcaatacagaatacttt
ctggaatcacaagctgtgatcaagatggttcaggaagccggcagagtgactgttaaagat
gggacttgtgaactcttgaagctgcctctccgttgccatgagtgtcagcagctgctgcct
tccatcccacagctgaaagagcacctcaggaagcactggggcgggtga
DBGET
integrated database retrieval system