Mus pahari (shrew mouse): 110338831
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Entry
110338831 CDS
T05929
Symbol
Rp1
Name
(RefSeq) oxygen-regulated protein 1 isoform X1
KO
K19538
retinitis pigmentosa 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mpah03037
]
110338831 (Rp1)
04812 Cytoskeleton proteins [BR:
mpah04812
]
110338831 (Rp1)
Cilium and associated proteins [BR:
mpah03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110338831 (Rp1)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
110338831 (Rp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
110338831
NCBI-ProteinID:
XP_021077948
Ensembl:
MGP_PahariEiJ_G0023898
LinkDB
All DBs
Position
22:12233484..12471903
Genome browser
AA seq
2105 aa
AA seq
DB search
MSDTPSTSFSMIHLTSSEGQVPSPRHSNVTHPVVAKRISFYKSGDPQFGGVRVVVNPRSF
KTFDALLDSLSRKVPLPFGVRNISTPRGRHSITRLEELEDGESYVCSHNKKVLPVDLDKA
RRRPRPWLSSRSISTHVQLRSATATVSTTAHGMLRAPRRLVVFRNGDPKNKHVVLLSRRI
TQSFEAFLQYLTQLMQCPVAKLYATDGRKVPSLQAVILSSGAVVAAGREPFKPGNYDIQK
YSLPAKLPGISHRVHRKGKAKTEKRKMSTHMPSVLRPQTDSLISEKTYDCFSDFSVAPET
YLALETHDSQTLSTYPSEDDVEKSIVFNQDGTMTVVMKVRFKIKEEETVKWTTTVNRAGL
SNNDEKNKKSSYPGKTDYRPSSLKLAACSLSEDIADTTQQGSLTEEENTQMTEQQALSCS
PAGWENASMETDIQESQKQVKHFYRPPTPGPRRMRQKKSVIGTVTVVSETEVQEKQFSYS
EERKGREKAEYHMFTHSCSKMSSVSNKLVQIGSDDEMESALERTKESVPLKSQAINAGAI
EITSQKVLKMCHNNALPSTASENSVMEEGADNSAVPGKAAIKHFRTCGNANDSFSSTTAD
STLTSVNNYSNDRNISELPSVGSPVLTTRLVNEFAHCGLTEQPENRKKVLSSFASKKKKK
KSQQRMITSKDKKKVIETKGNPNIHRAGTTAQERLLQESDCPDNGRRVCEEGLNTSPMVI
ESNNVFPQRNSKFSKNFHKNKINTFQNPKTQKLLAKRKSRPLKIISMGGLRKQEIDQEEK
VFLHSDIKLCESHLEKESLFHVFNILEEDQKVLHRPPSQVQKVTGNLKGMAKKSLVPKVN
DLHIMLRNQKKQMGFNLKSGAVVSEQRITTRADPSALKNSGFPERIPHHSVKSSVQRWLQ
NINPYPDFEHRKSGPLCQNRCNVENYNSNGFPGNNLHTTSSKGNSFLMESNKSKTENDNC
SGNTNQETGKSLVAKDNGEELNKHPCESQNGSLYDSYLVSLHENCTLSQTTINDPTTKSH
LSTEKSRPEVKLVYQERNFATKGQSIEVAIQVDTMGENVPKDYLPALLLRHLESFVPNNQ
KHQNGISQIPGSLAEVVFPSAIYNSSTNLLLAWLLVLNLKRNMNSFCQSDAHKMTNRSSE
TAALLEVLKHVAITEEAEDLKAAVANLVESTKTCSGSSEREQDMVPVNCTAASLHSVVKC
NENGSDQKTLLDEGYSVMEDCISEMVSKSRNSSCEMHTASMTNPPKQVDDQSDGLLTSSS
SSESQRSTQDASILGETCFLTDRVCSHKACAQKENIYEGACPSDETHIPVRDCHTTDSGH
SKENKCTDDLEFTEELKTVDKVPKDPSILADSMCKNDSNVSSSQNVSKLSSQGIFLSKIY
LESDKDYSPLEEFQNCPPKKIVDKKKSISSDKEESRTSEEPGSITNSVTSSERNATSELE
SFEELESQDTGIFNMKIRAEKKATKEMMQKESEARMSSELINVSGRNIIEQERRNTAILE
TTGRGQVTPPSLVFCYDSNKNTEKETSVGETKMRVKMMVDSMENESYSESSLNFKHHHRN
PGTLDWSDYGSDSESGYPCKASSHDHNDDAGQEREPPRGIVKRAIEKLYGKAELIKPPFF
HGSIHKSQVCPYNPVEVQCAKKTSFYESECQPLVSSEQVSRSSLMLQEFQEERQAQVDAN
GMGDSFGDSSIENVTKPSAHDRVFMEKEKGKLIDNGKWLLRENHLWRVSLDNPGMYGNAD
TTSVDTLLDKSSIEVPYSHFGELAPGPAMAELSSSEVEEMTQPLEVKCNYFNFPHGSDSE
PFGEDFSDAQNKTCPKEKIPNHHKDHKEEKSNYPSERMCTSVTQAFASAGNKVHPVCSDV
IKTQPLPGSNITHSTLQEGDSLDKLYALCGQHCPILTVIIQPVNEEDRGFAYRKDSDIEN
SLDFQLWMKIYPFLPQSKKNVFRSDGRKVSVGEEFADNVISDLCDKFYFKSMIDLDTRAN
SLEKGINLKKFQLYLKKRFSDPLSTSLLVVGDKDSVSLNPSNWTDNFKSLDENNNFLNRL
QNSRKNPNQVVRENTNCQFHLELFGQVYLLGICQAEKSLNIKTRSKLEMYYILEGEVLFI
WEEEN
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacaccttctactagtttctccatgattcatctgacttcttctgaaggtcaa
gttccttcgcctcgccattcgaatgtcactcatcctgtagtggctaaacgcatcagtttc
tataagagcggagacccacagtttggcggtgttcgggtggtggtcaaccctcgttccttt
aagactttcgacgctctgctggacagtttatccagaaaggttcccctgccctttggggta
aggaatatcagcacgccccgtggacgacacagcatcaccaggctggaggagttagaggac
ggcgagtcctacgtgtgctcccacaataagaaggtgctgccagttgacctggacaaggcc
cgccggcgacctcggccctggctcagtagtcgctccataagcacacatgtgcagctccgt
tcagcgactgccactgtgtccaccacggcgcatggcatgctccgcgccccgaggaggctc
gtggtcttccggaacggtgacccaaagaataagcatgtggtccttcttagccggaggatc
actcagagcttcgaagcctttctgcagtacctgacacagcttatgcagtgtcctgtggcc
aagctgtatgccacagatggaagaaaagttcctagtctccaggcagtgatactgagctct
ggagctgtggtggcagccggaagggagccatttaaaccaggaaattacgacatacaaaaa
tactcgcttcctgccaagttaccaggaatctctcatcgtgtgcaccggaagggaaaagcc
aagacagagaaaagaaagatgagcacacatatgccttcagtcctaagaccccagactgat
tccctgatctcagagaaaacatatgattgcttttcagacttttctgtagcccctgagact
tacttggccttagaaacacatgattctcagactttatcaacatatccttctgaagatgat
gttgagaaatcgattgtttttaatcaagatggtacgatgaccgtcgtgatgaaagttcga
ttcaagataaaagaagaagaaactgttaagtggacaacaactgtcaatagagctggtctt
tctaataatgatgaaaagaataagaaaagtagttatcctggaaaaacagattatcgaccg
tctagtttaaagcttgcagcatgttcattgtctgaagacattgcagataccactcagcag
ggcagtttgacagaggaagaaaatactcaaatgacagagcagcaggctttgtcgtgtagc
cctgctggttgggagaatgcctctatggagacagacattcaggaaagccagaaacaagtg
aagcacttttatagacccccaacccctggaccaaggagaatgagacaaaagaaatctgtg
atagggactgtcacagtagtatctgaaacagaggttcaagaaaagcagttttcctatagt
gaagaaagaaagggtagagaaaaagccgagtatcatatgtttacacattcttgcagtaaa
atgtcatcagtatctaataaacttgttcagatcggcagtgatgatgagatggagtcagca
ttagaaagaacaaaggaaagtgtaccactcaagtcacaggctatcaatgctggtgctatt
gaaattacaagtcagaaggtcttaaagatgtgccacaataatgctttaccatcaactgca
tcagagaactcagtcatggaagaaggcgcagacaacagtgcagtaccaggcaaagcagct
atcaagcacttcagaacttgtggtaatgccaatgacagcttcagttctaccacagcagat
tcaacacttacctcagttaacaactattcaaatgacagaaatatttctgagcttccttct
gtaggatctcctgtactcaccacaagacttgttaatgaatttgctcattgtggtttaaca
gaacaaccagaaaacagaaagaaggttttatcttcttttgccagcaagaagaagaaaaag
aaatctcagcagcggatgataacttccaaggataagaaaaaagtgattgaaaccaaagga
aaccctaatatacacagagcaggaacaactgcacaggaaagactattgcaagaatcagac
tgtcctgataatggaaggagagtttgtgaggagggccttaatacaagtcctatggtaatt
gagtcaaataatgttttcccccaaagaaattccaaattttctaagaatttccataaaaat
aaaataaatacttttcaaaatcctaagactcaaaaacttttagccaaaagaaaatcaaga
ccactaaagattataagcatgggaggactcagaaaacaggaaattgatcaagaagagaaa
gtatttctccatagtgacattaaactctgtgaaagtcatttggaaaaagaaagtttattt
cacgtgtttaatatcctggaagaagatcagaaagttttgcatagaccaccgtcccaagtg
cagaaagtaactggaaatttgaaaggaatggcaaaaaagagtttagtcccaaaagtcaat
gatttacacataatgttaagaaaccagaaaaaacaaatgggatttaacttaaagtcaggt
gctgtagtcagtgaacagcgtattacaaccagggcagatccatcagctttgaaaaactct
ggttttcctgagcgtattccccatcattcagttaagagctctgtacagcgatggttgcag
aacataaacccatatccagattttgagcataggaagtcaggtccactatgccaaaataga
tgcaatgtggaaaattataacagtaatggttttccaggaaataatctccatacaacttct
tcaaaaggaaatagttttttaatggaaagtaataagagcaaaactgaaaatgacaattgc
tcaggcaatacaaatcaagagacaggtaaatctcttgttgctaaagataatggtgaggag
cttaataaacatccatgtgagagccagaatgggtctctgtatgattcttacttggtttct
ttacatgagaattgtactttgtcacaaaccactattaacgatcctactactaaaagtcat
ttatctactgaaaagtcaagaccagaagtgaagcttgtttaccaagaaaggaactttgct
acaaaagggcaaagtattgaggttgccattcaggtagatactatgggagagaatgttcca
aaagactacttaccagccctgttgctacggcacctggaatcttttgttcctaataatcag
aaacatcagaatggaatttctcaaataccaggttcattagcagaggttgtcttcccttct
gcaatatataattcatccacaaatctccttctggcttggcttttggtactaaacctaaag
agaaatatgaatagcttctgtcaaagtgatgctcataagatgacaaacagatcttcggaa
acagctgcattgttggaagttctgaagcatgttgccatcacagaggaagctgaagacttg
aaggctgctgttgccaacttagtggaatcaaccaaaacttgcagtggatccagtgagaga
gaacaagatatggtaccagtaaattgtacagcagccagccttcatagtgtggtcaagtgt
aatgaaaatgggagtgaccagaagaccctcttggatgaaggctactctgtcatggaggac
tgtatctcagaaatggttagcaagtcacgtaactcttcatgtgagatgcacacggcaagc
atgactaatcctccaaaacaagtagatgaccagagtgacggccttctcactagcagtagt
tccagtgagagtcagcgttccactcaggatgcttctatcctaggagagacctgtttcctt
acagatagagtgtgttcccataaggcttgtgctcagaaggagaacatctatgagggagct
tgcccaagtgatgagactcacattcccgtaagagactgccacacaactgactctgggcat
tcaaaagaaaacaaatgcactgatgatctggaatttactgaagaactcaaaactgtggac
aaagttccaaaagatccaagtattctggcagattctatgtgtaaaaatgactctaatgta
tcttcatctcaaaatgtcagtaagttaagttcccaaggtattttcctaagtaaaatttat
ctagaatctgataaggactatagtcctctagaagaatttcaaaattgcccacctaagaaa
attgtggataaaaagaaatctatttcttctgacaaggaagaatcaaggacttctgaagaa
ccagggtcaataaccaatagcgtgacatcgagtgaaagaaatgccacttcagaattagaa
tcttttgaagaattagaaagccaggacacaggtatcttcaatatgaagataagggctgaa
aaaaaagctaccaaggaaatgatgcaaaaagaatcagaggctaggatgagctcagaattg
ataaacgtatcagggaggaatattatagaacaggaaagaagaaatactgccattctggag
acaaccggtagggggcaggtgacaccaccatctttagttttttgctacgattctaataaa
aacaccgaaaaagagaccagtgtaggagaaactaagatgagagtaaagatgatggtagac
agcatggaaaatgaaagttactcagagtcctcacttaattttaaacaccatcacagaaat
ccagggaccttagactggtcagactatggatcagacagtgagagtgggtatccttgtaaa
gcatccagccatgatcacaatgatgacgccggccaagagagagagcccccaagaggaatt
gttaaaagggcaatagaaaagctttatggcaaagcagagcttatcaaaccaccatttttc
catgggtctatacacaaatctcaagtttgtccttataatcctgtggaagttcagtgtgct
aagaaaaccagtttttatgagtctgaatgccagccactggtctcttctgaacaggtatct
agaagttcactcatgttgcaggaattccaggaggaaagacaagctcaggttgatgctaat
ggcatgggagacagttttggggacagcagcatagaaaacgttacaaaaccaagtgcgcat
gacagggtctttatggaaaaagagaagggaaaactgattgacaatggcaaatggctcctg
agagaaaatcatttgtggcgggtgtcattggacaatcctggcatgtacggcaatgcagac
accacatcagtggatactctattagataaaagcagcattgaggtgccatattcacatttc
ggagagttggctcctggtccagcaatggctgaattgtcctcttcagaagtagaggaaatg
actcaacctcttgaagtgaaatgcaattattttaacttccctcatggtagtgactctgaa
ccttttggtgaagatttttcagatgcacagaataaaacctgtcccaaagagaaaataccc
aatcatcacaaagatcataaagaggagaagagtaattatccttctgaaaggatgtgtaca
tctgttactcaagcctttgcttctgctggtaataaagttcaccctgtctgcagtgatgtg
attaaaactcagccattacccggaagtaacatcactcatagcacacttcaggaaggtgac
tctttggataaactctatgctctttgtggacaacactgtccgatactaactgttattatt
caacctgtaaatgaggaagaccgaggatttgcttatcgcaaagattctgatattgaaaat
tctttggattttcagttatggatgaaaatatacccatttctgccacagtcaaagaaaaac
gtgtttagaagtgatggcaggaaagtgagtgtgggtgaagaatttgctgataatgtcatt
agtgatctgtgtgataaattctatttcaaaagcatgattgacttggatacaagagctaac
tctttagagaagggaattaatttgaagaaattccaactatatttaaagaaaaggttttca
gatcctttgtccacatcattgctagtggttggggataaggattctgtttcactaaaccct
agcaattggacagataacttcaaaagtcttgatgagaataacaacttccttaacagatta
cagaactcaagaaaaaatcccaaccaagtagtaagagagaacaccaattgtcagttccac
ttagaactgtttggtcaagtttacttgttaggaatttgccaagctgagaaatccttaaat
atcaaaaccagaagtaaattagaaatgtattacattttagagggtgaagttcttttcatc
tgggaagaagaaaactga
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integrated database retrieval system
