Mus pahari (shrew mouse): 110338932
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Entry
110338932 CDS
T05929
Symbol
Chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110338932 (Chd7)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110338932 (Chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
110338932
NCBI-ProteinID:
XP_021078067
Ensembl:
MGP_PahariEiJ_G0023920
LinkDB
All DBs
Position
22:17939983..18120600
Genome browser
AA seq
2986 aa
AA seq
DB search
MADPGMMSLFGEDGNLFSEGLEGLGECGYPENPVNPMGQQMPLDQGFPSLQPSLHHPSPN
QNQTKLTHFDHYNQYEQKMHLMDQPNRMMGSAPGNGLASPHSQYHTPPVPQVPHGGGGGG
QMGVYPGMQNERHGQSFVDGGSMWGPRAVQVPDQIRAPYQQQQPQPAPSGPPAQGHPQHM
QQMGSYLARGDFSMQQHSQPQQRMGQFSQGQEGLSQGSPFIATSGPGHLSHLPQQSPSMA
PSLRHPVQQQFHHHPAALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRNQTVPSPTVNN
SGQYSRYPYSNLNQGLVNSTGMNQNLGLTNSTPMNQSVPRYPNAVGFPSNSGQGLVHQQP
IHSSGSLNQMNTQTMHPTQPQGTYASPPPMSPMKAMSNTAGTPPPQVRPGSAGMPMEVGS
YPNMPHPQPSHQPPGAMGIGQRNMGPRNIQQPRSFMGLSSAPRELAGHMRPNGCPGVGLA
DPQAIQERLIPGQQHPGQQPSFQQLPTCPPLQPHPGLHQSSPPHPHHQPWAQLHPSPQNT
PQKVPVHQHSPSEPFLEKPVPDMTQVSGQNAQLVKSDDYLPSIEQQPQQKKKKKKNNHIA
AGDPCKGFGKDDFPGGVENQELRRNSLDVSQEEKKKKKRPKVKKDPKESKEPKEKKEPKT
PKAPKIPKEPKEKKAKTVTPKPKSSKKSSNKKPDSEASALKKKVNKGKAEGSENSDLDKT
PPPSPAPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDSPSNTSQSE
QQESVDAEGPVVEKIMSCRLVKKQKESGEEAEVEEFYVKYKNFSYLHCQWASVEDLEKDK
RIQQKIKRFKSKQGQSKFLSEIEDDLFNPDYVEVDRIMDFARSTDDRGEPVIHYLVKWCS
LPYEDSTWELKQDIDPAKIEEFEKLMSREPETERVERPPADDWKKSESSREYKNNNKLRE
YQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPN
WEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTD
CPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHF
LEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVEL
TNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFK
ETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRR
YPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP
QNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATN
GVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFA
KASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKE
DELMEFSDLESDSEEKPCAKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRY
KRQLTEQDVETICRAILVYCLNHYRGDENIKSFIWDLITPTADGQTRALLNHSGLSAPVP
RGRKGKKVKAQSTQPVVHDAHWLASCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLRQ
EVIGDQAEKILEGADSSEADVWIPEPFHAEVPADWWDREADKSLLIGVFKHGYEKYNSMR
ADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRAPFKDEIDE
FANSPPEDKEDSMEVHSSGKHCESSAELGQLYWPNTSTLTTRLRRLITAYQRSYKRQQMR
QEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFGVIFDPVKQ
QFDWNQFRAFARLDKKSDESLEKYFGCFVAMCRRVCRMPAKPEDEPPDLASLIEPITEER
ASRTLYRIELLRKIREQVLHHPQLSDRLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGVS
RTDYHILNDPELSFLDAHKSFAQNRGASTVPSLNTLAMGFGQTPPVISSAHAHEEKVMEQ
TEGKAEECEHSPAKERSDGKEEEEEAGRVKDGKQECEAEASSVKGQLKGVEGSADPGSKS
VSEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKTFDEESNASMSTARDETRDGFYMED
GDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLVPGYPP
STVDSPLQKRSFAELSVVSQASISASEDITTSPQLSKEDALNLSVPRQRRRRRRKVEIEA
ERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSLTSKFILPNVS
TPVSDAFKTQMELLQAGLSRTPTRHMLNGSLVDGEPPMKRRRGRRKNVEGLDLLFMSHKR
TPLSAEDAEVTKAFEEDIETPPIRNIPSPGQLDPDTRIPVINLEDGTRLVGEDAPKNKDL
VDWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPVVN
KRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRG
EGASRRGRRPKSEMARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNLQSLQLAG
LMGFPPGLATAATAGGDAKSPAAVLPLMLPGMAGLPNVFGLGGLLNNPLSAATGNTTTAS
SQGEPEDGASKAEEKGNDHEDENRDSEKSTDAVPAADSANGSVGAATAPTALPSNPLAFN
PFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGTSEEKAADKAEGGPCKDGE
TLEGSDAEENLDKTVESSILEDEVAQGEELDPLEGGEERENNGNDE
NT seq
8961 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggatgggaatctgttcagcgaaggc
ctcgaaggcctcggggaatgtggctaccccgaaaacccagtgaaccccatgggtcagcag
atgcccctagaccaaggttttccctccttacagccatccctccaccatccttcccctaat
cagaatcaaaccaagttgacccatttcgatcactataatcagtatgaacaaaagatgcat
ctgatggatcagcctaaccgaatgatgggcagtgcccccgggaacggattggcgtctccg
cactcacagtatcacacccctcccgtcccccaggtgccccacggaggtggcggcggcggt
cagatgggagtctatcccggcatgcagaacgaaaggcacgggcaatcttttgtggatggc
ggctccatgtgggggccccgggccgttcaggtaccagaccagatacgagccccctaccag
caacagcagccgcagccggctccgtcggggcccccggcgcagggccacccccagcacatg
cagcagatgggcagctacctggcacgtggggatttctccatgcagcagcacagccagcca
cagcagaggatgggccagttttcccaaggccaagagggcctcagtcagggaagccctttc
atcgccacctcaggacccggccacctgtcgcacctgccccagcagagccccagcatggcc
ccttccctgcgccacccagtgcagcagcagttccaccatcaccccgctgctctccacgga
gaatccgttgcccacagtcccagattctcccccaaccctcctcaacaaggggctgtcagg
ccacaaacccttaactttagttctcggaaccagacagtcccctcccctactgtaaacaac
tcagggcagtattctcgatatccttacagtaacctaaatcagggattagttaacagtaca
gggatgaatcaaaatctaggccttacaaacagtactccaatgaatcagtcggtaccaaga
taccccaatgctgtgggattcccgtcaaacagtggtcagggactcgtgcaccagcagcct
atccactccagtggctcactgaaccaaatgaacacacaaactatgcaccctacacagcct
cagggaacttacgcctctccacctcccatgtcacccatgaaagcaatgagtaacacagca
ggcacacctcccccgcaggtccggcccggaagtgctgggatgcccatggaagttggcagt
tatccaaatatgccccaccctcagccatctcaccagccccctggtgccatgggaatcgga
cagaggaatatgggccccagaaacatacagcagcctcgttccttcatgggcttgtcctcg
gcgcccagggagctggccggacacatgagaccaaatggttgccctggcgtcggccttgcg
gatcctcaagccatccaggaacgactgatacccggccaacagcaccctggtcagcagcca
tctttccagcagttgccaacctgtcctccactccagccccacccaggccttcaccagtct
tcacctccacacccccatcaccagccttgggcacaactccacccgtcaccccagaatacc
ccgcagaaagtgcctgtgcatcagcattctccatcggagccctttctagagaagccagtg
ccggatatgactcaggtcagcggacagaacgctcagctagtgaagagcgacgattacctg
ccgtccatagagcagcagccgcagcagaagaagaagaaaaagaaaaacaaccacattgct
gcaggggatccctgtaaaggttttggtaaagatgacttccctggtggggttgaaaaccaa
gaactgcgcaggaactcactggatgtgtcccaggaagaaaaaaagaaaaagaaaaggccg
aaggtcaaaaaagatccgaaggaatcgaaggagccgaaggagaagaaagagcccaagacc
ccaaaagccccgaagatccccaaagagccaaaggaaaagaaagcaaaaactgtcacgcca
aaacccaaatccagcaaaaagtcaagtaataagaaaccggattccgaggcaagtgctttg
aagaaaaaggtcaacaaaggaaaagcagaaggttctgaaaattcagacttggacaaaaca
cccccaccatcccctgctcctgaagaggacgaagacccaggtgtccagaagaggcggtcc
agcaggcaggtgaagaggaagcgatacactgaagatttggagttcaagatttctgatgag
gaggcagatgatgcagatgctgccgggagagactccccatccaacacctcgcagtcagag
cagcaggaatctgttgatgcagaaggcccagtggtggagaagatcatgagctgtcgccta
gtgaaaaagcagaaggaatctggcgaggaggcagaagttgaggaattttatgtgaagtat
aaaaacttctcctatcttcattgtcagtgggcgtcagtagaagatctggaaaaagacaag
agaattcagcaaaagataaaacggtttaagtcaaaacagggccagagcaaattcctttca
gagatcgaggacgatctctttaatccagattatgtggaagttgaccggataatggacttt
gcacgtagcacagatgaccggggcgagcctgtgattcactatctggtgaagtggtgctca
ctcccgtacgaagacagcacatgggagctgaagcaggacatagatccagcaaagatcgaa
gagtttgaaaaactcatgtccagggagccggaaaccgagcgtgtggagcgacctcctgct
gatgactggaagaaatcagagagttccagggagtataaaaacaataacaaactcagggaa
taccagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatt
ttagcagatgagatgggtttgggaaaaactatccagtccattacgtttctctatgagata
tacttgaaaggaatccacggcccttttttagtaattgccccgttgtccacaatccccaac
tgggaaagggaattccgaacctggacggagttgaacgtggttgtgtaccatgggagccaa
gccagccgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtg
ataaaggggtcctataagttccacgccatcatcacgacgtttgagatgattctgacggac
tgtcccgagctgcgtaatatcccctggcgctgtgtggtcatcgacgaagcccacaggctg
aagaacaggaactgcaaactgctggaagggctgaagatgatggacttggaacacaaagta
ctgctgaccgggaccccgctgcagaacactgtggaagagctcttcagcctgcttcatttc
ttggagccaagtcgcttcccttcagaaacaacctttatgcaagaattcggtgatctgaaa
acggaagagcaggtgcaaaaactacaggctattctaaagccaatgatgttgagacgcctg
aaagaggatgtagaaaagaacttggcccccaaagaagagactattattgaagttgagcta
acaaacattcagaagaaatattaccgagccatccttgagaagaattttacgtttctttcc
aaaggtggtggacaagctaacgtacctaaccttttaaacactatgatggaactgagaaaa
tgctgcaatcatccctacctaatcaatggtgctgaagagaaaattttggaagagtttaaa
gaaacacacaatgcagagtctccagattttcagctccaggcaatgatccaggctgctggc
aagctggtgctgattgacaagctgctgccaaagctgaaggctggtggccacagggtgctt
atcttttcccagatggtgcgctgcttggacatcctggaagactatctcatccagagacgg
tacccatacgaaaggattgatggccgggtcagaggcaacctccgccaggcagctattgac
agattctccaaacctgattccgataggtttgtgtttctcctgtgcacacgggcaggaggg
ctaggcattaacctcactgctgctgatacctgcatcatttttgattcagactggaacccc
cagaatgacctccaggctcaagctagatgccacagaatagggcagagcaaatctgtgaag
atctacaggctgattacaaggaactcctatgaaagggagatgtttgacaaggctagtctg
aagctgggtctggataaagccgtgttgcagtccatgagtggaagagaaaatgccactaat
ggggtacaacagctttccaagaaggaaatagaagacctcctgcggaagggggcgtatggc
gcacttatggatgaagaagatgaggggtctaagttttgtgaagaagatattgatcagatt
ctccttcgacgaacccacactattaccattgagtctgaaggaaaaggctccacgtttgcg
aaggccagttttgttgcgtctggaaataggacagatatctctttggatgacccaaatttc
tggcagaagtgggctaagaaggctgaattggacatcgatgccttaaacgggaggaacaac
ctcgttattgacacgccgagagtgaggaagcagacccggctatacagcgcagtgaaggaa
gatgagctgatggagttctccgacctggaaagcgactctgaagaaaagccctgcgcaaag
ccacgacgcccccaggataagtctcagggctatgcccggagcgagtgcttcagggtggag
aagaatcttctagtttacggctggggccgctggacagacatcctgtcccatggacgctac
aaacgtcagctgactgagcaagatgtcgaaaccatctgcagagccatcctggtgtactgt
ctcaaccactacagaggggacgagaacatcaagagctttatctgggacctcatcacgccc
acggcggatggccagactcgggccctgctcaatcattccggtctgtcggcccctgtgcca
cggggccggaaggggaagaaggtgaaggcccagagtacacagccagtagtgcatgacgct
cactggctggcaagctgcaacccggacgccctgttccaggaggacagctacaagaagcac
ctgaagcaccactgtaacaaggtcctgctgcgtgtccgcatgctgtactacctaagacaa
gaagtgataggagaccaggcagagaagatcctcgagggcgctgactcaagtgaagcagac
gtgtggatccccgagccattccatgctgaagttcctgcagattggtgggatagagaagca
gataaatccctcttaattggagtgtttaaacatggctatgagaagtacaattccatgcga
gctgaccctgcactgtgcttcctggaacgagtcggaatgccggatgccaaggccatcgct
gctgagcagagagggacagacatgctagcagatggtggtgacggtggagaatttgataga
gaagatgaagatcccgaatataaaccaacgagagcaccattcaaagatgaaatagatgaa
tttgcgaattctcccccagaggataaggaagactccatggaggtgcacagctcaggcaag
cactgcgagagcagtgccgagttaggtcaactctactggccgaacacgtcgaccctgact
acgcgtctgcgccggctcattactgcctatcagcgcagctataaaaggcagcaaatgagg
caagaggccctaatgaagacggaccggcgcagacggaggccccgggaggaagtgagagcg
ctggaggcggagagggaagctattatatctgagaaaaggcaaaagtggacgagaagagaa
gaggccgacttttaccgggtggtatccaccttcggggttatttttgaccccgtgaaacag
cagtttgattggaaccagttccgagcctttgccagactagacaaaaagtctgatgagagc
ctggagaaatatttcggctgctttgtggccatgtgcagacgggtgtgtcgaatgcctgcc
aagcccgaagacgagccacctgacctcgcctcccttatcgagcccatcacagaggaacga
gcatccaggacactgtaccgcattgaactgcttcgcaagatccgagagcaggtccttcat
cacccacaactgagcgacaggctgaagctctgtcaacccagcctagacctgcctgagtgg
tgggagtgtggacggcacgacagggacctgctggtgggtgctgctaagcacggggtcagc
cggacagactaccacatcctcaacgaccctgagttgtccttcttagatgcacacaaaagc
tttgctcagaaccgtggggccagtactgtcccttctttgaatactctggccatgggcttt
ggccagactcctccagtcatttcctctgctcatgctcatgaagaaaaggtaatggagcag
actgaaggcaaggcagaggagtgtgaacactcaccggccaaagagaggtcggatgggaaa
gaggaggaagaagaagcgggcagggtcaaggacggcaagcaggaatgtgaggccgaggcc
agctctgtgaagggccaactcaaaggggtggagggcagcgcagaccctgggtccaagtct
gtctcagagaagggctcagaagaggacgaagaagaaaagctggaggacgacgacaagtcg
gaggagtcgtcgcaaccggaagcaggagccgtctctagagggaagactttcgacgaagaa
agcaatgcttctatgagcaccgctagggatgaaacccgagatggattctacatggaggat
ggagatccttcagtggcccagctccttcacgaacgaacatttgccttctccttttggccc
aaggacagagtaatgataaaccgattagacaacatctgtgaagctgtactgaaaggcaaa
tggccagtaaatcggcgccagatgtttgatttccagggcctcgtccctgggtacccaccc
tccaccgtggacagtcccctgcagaagaggagctttgccgagctctctgtggtcagccag
gccagcatcagtgcgagcgaggacatcaccacatctcctcagttgtccaaggaggatgcc
ctcaacctgtctgtccctcgccagcggcggcggcggagaaggaaagttgaaatcgaggct
gaaagagccgccaagaggcgaaaccttatggagatggttgcccagcttcgagagtctcag
gtggtctcagaaaatggacaagaaaaagttgtggacttatcaaaggcctcgagagaggca
acaagctctacctcaaatttctcatctcttacttcaaagtttatcctgcctaatgtctcc
acgccagtgtccgatgcctttaagactcagatggagctgctccaagcaggcctttcacgc
acacccacgaggcatatgctcaatggctccctggtggatggagagccccccatgaagagg
aggcgaggcaggaggaaaaacgtggagggcctcgacctgcttttcatgagccacaaacgg
acgccgttaagtgcagaggatgccgaggtgaccaaagcttttgaagaagatatagagacc
ccaccaataagaaacattccttctcctggacagctggacccggacacccggatccctgtg
ataaaccttgaagatgggactaggctggtgggagaagatgctcctaaaaacaaggacttg
gttgactggctgaagctgcaccccacctacactgtcgatatgccgagttatgtaccaaag
aacgcagacgtgctgttttcctcgtttcagaaaccgaaacagaaacgacatagatgtcga
aatcctaataaattggatataaacactttgacaggagaagaaagggttcccgttgttaac
aaacgaaatgggaagaagatgggtggagccatggcccctccaatgaaggacctgcccagg
tggctggaggagaaccctgagtttgcagttgctccagactggaccgatatagtcaagcaa
tctggttttgttcccgagtcaatgtttgaccggctcctcactggacctgtggtgcgggga
gaaggagccagcaggagaggacggaggcccaagagcgagatggcccgagccgccgcagcg
gcggcggctgtcgcctctacttcagggatcaacccactgttggtgaacagcctgtttgct
gggatggacctgacaagccttcagaatctccagaacctccagtccctccagctggcaggg
ctcatgggcttccctccaggactggccacagctgccaccgccggaggcgacgccaagagc
cccgccgccgtgctgcccctgatgctgccggggatggcgggcctgcccaacgtgttcggc
ctgggcgggctgctgaacaaccctctctcagctgctactggaaacaccactactgcttcg
agtcaaggagagccagaggacggcgcttccaaagcggaagagaaagggaacgaccatgaa
gacgagaaccgagactctgagaaaagcacagacgccgttccggctgctgactccgcgaac
ggatctgtgggtgctgctactgccccgactgcattgccctccaacccgctggccttcaac
cctttcctcctgtccaccatggccccaggcctcttctacccatccatgtttctacctcca
ggactggggggattgacactgcctggcttcccggcactggcgggactccaaaacgccgtg
ggtaccagcgaagaaaaggctgctgacaaggccgagggaggcccctgtaaagacggagag
accctggagggcagcgatgccgaggagaacctggacaagactgtggagtcctccatcttg
gaagacgaggttgcacagggtgaagagctggaccccctcgaaggcggggaggagagagaa
aacaacggaaatgacgagtaa
DBGET
integrated database retrieval system
