Mus pahari (shrew mouse): 110338944
Help
Entry
110338944 CDS
T05929
Symbol
Arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110338944 (Arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110338944 (Arfgef1)
Membrane trafficking [BR:
mpah04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
110338944 (Arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
CheX
Motif
Other DBs
NCBI-GeneID:
110338944
NCBI-ProteinID:
XP_021078077
Ensembl:
MGP_PahariEiJ_G0023872
LinkDB
All DBs
Position
22:7170698..7266017
Genome browser
AA seq
1846 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKVETEKQSPPHGEAKA
GSGTLPPVKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGSAPDST
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMERERHRQQQHLLQSPVSHHE
PESPHLRYLPPQTVDHITQEHEGDLDPQTHDVDKSLQDDTEPENGSDISSAENEQTEADQ
ATAAETLSKNDILYDGDCEEKPHDIVQSIVEEMVNIIVGDMGEGMAISASTDSNTGTVED
GSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDA
FLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQ
YLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFD
HKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNV
QELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQEISEIKHPETINRYG
SLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQ
GMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRL
FLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQV
KNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSTKQNVAS
EKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVG
LQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNI
DTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSLTGT
KDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDF
VRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPN
EDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQM
VNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTLVFEKHFPATIDSFQDA
VKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMSVAPEDRVWVRGWF
PILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQ
QTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNC
LENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPTSGEAAPPSPSAVSEKQLD
AISQKSVDIHDSIQPRSSDNRQQAPLVSVSTVSEEVSKVKSTAKFPEQKLFAALLIKCVV
QLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLFKLL
DCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESR
VSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHASFY
YPLLCEIMQFDLIPELRAVLRRFFLRIGIVFQISQPPEQELGINRQ
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagggcaagaagacgaagaacatgttcctgacccgggccctggagaagattctg
gccgacaaggaagtgaagaaggcgcatcactcccagctgcgcaaagcgtgcgaggtggcc
ctagaggaaataaaagttgaaactgagaaacaaagtcctcctcatggagaagcaaaagct
ggatcaggcacccttccaccagtgaaatcaaagacaaattttattgaagcagacaagtac
tttttaccctttgagttggcatgccagtccaaatgtccccgcatagttagtacatctcta
gattgtttgcagaaacttattgcttatgggcacttgactggcagtgctccagatagtacg
acaccaggcaaaaaattaattgatagaattattgaaacaatatgtggctgcttccaaggt
cctcaaacagatgaaggagttcagttgcagataataaaggctttgcttactgcagtaaca
tcgcaacacatagaaattcatgaaggaactgtactgcaagctgtgagaacatgctacaat
atctatttagccagcaaaaatctcatcaatcagacaacagccaaagctactcttactcaa
atgctaaatgttatctttgcacgcatggaaaaccaagcattacaggaagccaaacagatg
gaaagagaaagacatcggcagcagcagcatttgttacagtctccagtaagccatcatgag
cccgagtcacctcatcttagatatttgccacctcagactgttgatcatataacccaagag
catgaaggggatcttgatccccaaacacatgatgtggataaaagtctccaagatgataca
gagcctgaaaacggatctgatatttccagtgcagaaaatgaacagacagaagctgatcag
gcaactgcagctgaaacattatctaaaaatgatatcttgtatgatggagactgtgaagaa
aagccacatgatattgtccagagcattgtagaagaaatggtgaacatcattgttggagac
atgggagaagggatggctatcagtgcaagtacagacagcaacactggaactgtagaagat
ggtagtgacagtgaaaacatccaagcaaatggaatcccaggaacacccatttctgttgca
tatacaccatcgttacctgacgacaggttatctgtctcctccaatgatactcaggaatct
ggaaattcttcaggaccttcacctggtgctaagttttcccacattttacaaaaggatgcc
tttctagtgttcaggtcattgtgtaagctgtcaatgaaaccactgtcagatggaccacca
gatccaaagtctcatgagttacggtccaagattctttcattgcagttgcttctgtccatt
ctgcagaatgcaggacctgttttcaggacaaatgagatgtttattaatgctatcaagcag
tatctgtgtgttgcactctcaaaaaacggagtctcatctgttccagaggtttttgagctt
tctctttccatatttcttactttgttgtcaaacttcaagacacatctgaagatgcaaatt
gaggtattctttaaagaaatcttcctgtacattttggaaacttctacaagctcttttgac
cataagtggatggttattcagacactgacaaggatctgtgcagatgctcagagtgtggtg
gatatttatgtaaattatgactgtgacctaaatgcagcaaatatatttgaaagactagta
aatgacctgtcgaaaattgcccaaggaaggggcagtcaagaacttggtatgagtaatgtt
caggaattgagcctgcgaaaaaaggggttagaatgtttagtttcaattttgaaatgtatg
gttgaatggagtaaggatcagtatgtgaatcccaactctcaaactacccttggtcaggaa
aaaccctcagagcaagagataagtgaaattaaacacccagagactataaacagatatgga
agtttaaactccttagaatccacatcatcatcaggaattggcagctacagtacacagatg
tctggcactgataatccagagcaatttgaggtcctaaagcagcaaaaagaaataatagaa
caagggattgatttatttaataagaaaccaaagagaggaatacagtacctccaagaacaa
gggatgcttggcaccacacctgaagatatagctcagttcttacatcaagaagaaagatta
gactctactcaagtgggtgagttcctgggagataatgataaattcaataaagaagtcatg
tatgcatatgtagaccaacatgacttttcaggaaaagactttgtttcagctcttcgtctg
tttctggaaggattccggcttccaggagaagctcagaaaattgatcgattaatggaaaaa
tttgctgcaagatacctcgagtgcaaccaaggacaaaccctttttgctagtgcagatact
gcttatgttttggcctattcaattatcatgttgaccacagaccttcacagtccacaggtt
aaaaacaagatgacgaaagaacagtacattaaaatgaatcgtggtatcaatgacagtaaa
gatctccctgaagagtatctatcagccatttataatgaaatagctgggaaaaaaatatca
atgaaagaaacaaaagaactaacaatccctacaaagtcaactaaacagaatgtagccagt
gaaaagcaaagacgacttctgtataacttagagatggaacagatggccaagacggctaaa
gcactcatggaagctgtgagccatgttcaagcaccttttacaagtgcaacacacttggag
cacgtgaggccgatgtttaagttggcttggacaccttttctggctgcattcagtgtgggt
ctacaagactgtgatgatactgaagtagcctctctttgcctagaagggataagatgtgca
atcagaattgcatgcattttcagcattcagctggaaagagatgcgtatgtccaagcacta
gccagatttaccttacttacagtgagttctggtattactgaaatgaaacagaagaatatc
gacacaataaaaacactcatcacagtggctcacactgatggaaattatttaggaaattcc
tggcatgagatcctgaagtgcatcagccagttagagctggcacaacttataggaactgga
gtgaagcctcggtacatttctggaactgtgagaggcagagaagggtctctcactgggaca
aaagatcaggctcccgatgaatttgttggtctagggctagttggaggaaatgtggactgg
aagcagatagccagtattcaggagtctattggagaaaccagctctcaaagtgttgtagtt
gctgtagatagaatattcaccggatccacaaggctagatggaaatgctattgtcgatttt
gtccgttggctatgtgctgtgtctatggatgaattgctttctactacacacccaagaatg
tttagtctacaaaaaatagtagaaatatcatactataacatgggaagaataagactgcag
tggtctcggatttgggaagttattggagatcattttaataaggttggttgtaatcctaat
gaagatgtagccatatttgcagtagactccctgaggcagctatcaatgaagtttttagag
aaaggagagcttgcaaacttcagattccaaaaggatttcttacgaccttttgaacatata
atgaaacgaaacaggtctccaacaattcgagatatggttgtacggtgtatagcacaaatg
gttaattctcaggctgcaaatattcgttcaggatggaagaacattttctcagtattccat
ctagctgcatcagaccaagatgaaagcatagtagaacttgcatttcagacaacagggcac
attgtcactcttgtatttgaaaaacactttccagccaccattgattctttccaggatgca
gtgaagtgtttgtctgaattcgcatgtaatgcagctttcccagacacaagtatggaagca
atccgacttattcgccattgtgcaaaatatgtgtctgatagacctcaggctttcaaggag
tacacaagtgatgacatgagcgtggcacctgaagacagggtgtgggtgagagggtggttc
ccaatcctctttgagttgtcttgtatcatcaatagatgcaaattagatgtaagaaccagg
ggcttaacggtaatgtttgaaataatgaaaacatatggccacacttatgaaaaacattgg
tggcaggacttattcagaattgttttcagaatctttgacaacatgaaattgccagaacag
cagacagagaaagctgaatggatgacaacaacttgtaaccatgccctttatgcaatatgt
gatgtattcacccagtatttagaagttctcagcgatgtacttttggatgatatttttgcc
caactttactggtgtgtacaacaagacaatgagcagttagcacgatctggtacaaactgc
ttagaaaatgtggttattctgaatggtgaaaagtttactcttgaaatctgggataaaacg
tgtaactgcaccctggatatcttcaaaaccacaatcccgcatgcgcttctgacttggcgc
cctacctctggagaggctgcacccccatctccatcagctgtgagtgaaaagcagttggat
gcaatatcacaaaaatctgtagacatacatgattctattcaaccaagatcttcagataac
agacagcaagcaccactggtttctgtttctactgtgagtgaagaagttagcaaagtgaaa
tccacagcaaaattcccagaacaaaaattgtttgctgccctgttgattaaatgtgttgtg
cagctggaactcatccagaccatcgacaacattgtgttcttcccagccacaagcaagaag
gaggatgcagaaaacttagcagcagcccagagagatgcagtagacttcgatgttcgagtt
gatactcaagaccaaggaatgtaccgctttttaacatcacaacaactgttcaagctactg
gactgcttattagaatcacatagatttgcaaaagcatttaattccaacaatgaacagagg
actgctctgtggaaagcaggcttcaaaggcaagtccaagcccaaccttctaaagcaggag
acgagcagcctggcctgtgggctgcgcattctcttccggatgtacatggacgagagcaga
gtcagtgcctgggaagaagtccagcagaggcttctaaacgtctgcagtgaagcgctgagt
tatttcctcactctaacatccgaaagtcaccgggaagcctggactaacttactgttactg
ttcctcactaaagttctgaagatcagtgacaacaggtttaaagctcatgcgtcattctac
taccctctcttatgtgaaattatgcaatttgacctgattccggaactgcgtgctgttctt
agaagatttttcctgcggattggaatagtatttcaaatatcacaaccacctgaacaggaa
ctcgggataaacaggcaatga
DBGET
integrated database retrieval system
