Mus pahari (shrew mouse): 110338961
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Entry
110338961 CDS
T05929
Symbol
Prdm13
Name
(RefSeq) PR domain zinc finger protein 13 isoform X1
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110338961 (Prdm13)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110338961 (Prdm13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-BED
Motif
Other DBs
NCBI-GeneID:
110338961
NCBI-ProteinID:
XP_021078091
Ensembl:
MGP_PahariEiJ_G0023966
LinkDB
All DBs
Position
22:complement(29364181..29372890)
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AA seq
778 aa
AA seq
DB search
MPARVTPRTEDARRGAGPSSACGCSWFCHLRPVEDPASPSVCLAAVATMHGTSRTSATSV
NADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDESGGSPLEWIGLIR
AARNPQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFDIPTIATPTHDEK
GTALRSPQQWVSWSKVQFSWIVEGEERYICWYCWRTFRYPNSLKAHLRFHCVLSGGGSRA
FLPQERAARPGASPVAEGLGLPSKPTVPDLTAPVQAIALRPQAQTAQLAQACGARESIKR
EASLAPLATSPPPGKWGTPKKGKEQPDRAHSHFLGIVGGSSSGSGALPFYPGVRSAFKPA
GLARAAAQSDPYREEGGGGKGPGLALGRLLGGGRAGGRPGSGESPAGHHHHHHHAHHHHH
HHPKCLLAGEPPPAGLSCPGALRAFPLLAGHPEEASAFKHVERAPAVAAAAAPSLPAARY
AALPAPGLPVERCALPPLDASSLKAYPGGGGGGGECSPLPAVMPAFTVYSGDLFYGPPAA
YYPLKLHLGGLLKYPESISYLSGPAAAAAAAAAAAAAIGPAELGSLASIDREIAMHTQQL
SEMAAGKGRARLDSGTLPPAVVAAAGPGGGGGGGSAAGKPKTGHLCLYCGKLYSRKYGLK
IHMRTHTGYKPLKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHV
KSRHPGQSLMAKAGDGPGAEPGYVLESGDPKSEDSDVDVCFTDDQSDPEAGGRGEQDS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgcgtcactccgcggacagaagacgcacgtcggggtgcgggtccctcctct
gcatgcggctgctcctggttctgtcacttgcgccccgtggaggaccccgcgagtcccagc
gtctgcctggcggcggtggcaacaatgcacggaacttcccgcacttcggccaccagcgtg
aacgctgactgctgcatcccggctggcttgcgccttgggccggtgcctggcaccttcaag
ctgggcaagtacctgtcagatcgcagggaaccagggcccaagaaaaaggtgcgcatggtg
agaggggagctggtggacgagtcagggggctcccctctggagtggatagggttaatccgg
gcagccaggaatccccaggaacagactctggaagctattgcagacttaccaggaggacag
atcttctatcgggcattgcgagacgtccagcctggggaagagctgactgtgtggtattct
aactccttggctcagtggtttgacatccctacaattgcgactccaactcatgatgagaaa
ggtactgctctgaggtctccccaacagtgggtgagctggagcaaagtccagttctcctgg
attgtggaaggggaggagcgctacatctgctggtactgctggaggacctttcgctaccct
aacagcctcaaggcacacctgcggttccactgcgtgctcagcggcggcgggagccgcgcc
ttcctgccccaggagcgcgcggcccggcccggagcttccccggtggcagaaggcctcggc
cttccttcaaaacccactgtcccggacttgacggcgcccgtccaggcaatcgctttgcgg
ccccaagcgcagaccgctcagctcgcccaggcgtgcggggcgcgggagagcatcaagcgg
gaggcttccctggcgcccctggccacctccccgccgccgggcaagtggggaacgcccaag
aagggcaaggagcagccggaccgcgcgcacagtcacttcctggggatcgtgggcggctcc
tcgagcggcagcggagccctgccattctacccaggcgtgcgctcggctttcaagccggcc
ggcttggcccgggccgctgcgcagagcgacccctaccgggaagagggcggtggcggcaag
ggacccgggctggcgcttggtcggctgctgggcgggggccgggccggcgggcgcccgggg
agtggggagagccccgcgggccaccaccaccatcaccaccacgctcaccaccaccaccat
caccatcccaagtgcctgctggcgggggagccgccgccggcgggcctgtcatgtcccggg
gccctgcgagccttcccgttgctcgccggtcacccggaagaggcgtccgccttcaagcat
gtggagcgggcccctgcggtcgccgcggccgccgccccctcgctgccggccgcgcgctac
gccgctctccccgcgcccgggctccccgtggagcgctgcgcgctgccgcccctcgacgcc
agcagcctcaaggcgtaccccggcggcggcggcggaggcggtgaatgcagccccttgccc
gccgtcatgccggccttcacggtgtacagcggagacctgttctacggccctccggccgcc
tattaccccctcaagctacacttgggcgggctgctcaaatacccggagtccatctcctat
ctgagcggccccgcggcggcagcggcggcggcagcagcggcagcggcggcgatcgggccg
gccgagctgggttccctggccagcatcgaccgcgagatcgccatgcacacacagcagctg
tccgagatggcagccgggaagggtcgcgcccgcctggactcggggacgctgcctccagcc
gtagtggcggcggcgggccccgggggtggcggcggtggcgggagcgcggcaggcaagccc
aagaccggccacttgtgcctctactgtggcaagctgtactcgcgcaagtacgggctcaag
atccacatgcggacgcacacgggctacaagccgctcaagtgcaaagtgtgcctgcggccc
ttcggcgaccccagcaatctcaacaagcacatccgactccacgccgagggcaatacgccc
taccgctgcgagttctgcggcaaggtgctggtgcgccgccgagacctggagcgtcacgtc
aagtcccgccacccaggccagagcctgatggccaaggcgggcgacggcccgggcgcagag
cccggctatgttctggagtctggggatcccaagagcgaggacagtgatgtagacgtctgc
ttcactgacgatcagagcgaccctgaggctgggggtcgtggcgagcaagactcctaa
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