Mus pahari (shrew mouse): 110338985
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Entry
110338985 CDS
T05929
Symbol
Rin1
Name
(RefSeq) ras and Rab interactor 1
KO
K17638
Ras and Rab interactor 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
110338985 (Rin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110338985 (Rin1)
Membrane trafficking [BR:
mpah04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110338985 (Rin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RIN1
RA
SH2
Motif
Other DBs
NCBI-GeneID:
110338985
NCBI-ProteinID:
XP_021078113
Ensembl:
MGP_PahariEiJ_G0014028
LinkDB
All DBs
Position
1:116449635..116456147
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AA seq
798 aa
AA seq
DB search
MCTPVPWGLDCLPESQEKLKELPAMEDPGETGEHPLGATSLNFVPGHQQKEKPSPDPLYD
TPDVRGVQAGGSQQPARTVSLRERLLITRPVWLQLRANAAAALHVLRTEPPGTFLVRKSN
TRQCQALCVRLPEASGPSFVSSHYIEESPGGISLEGSELMFPDLVQLICGYCCTRDILLL
PLRLPRAIHQAVTHKELEAISHLGMEFWSSSLNTKDQQRPSEAPPIPRLKARSPQELDQG
TGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLPGTSSSQ
TERLPPRQPLQRESSVGYRVPGSAAGPSLPPLPSLQEVDCCSPSSSEEEGSSGSPTTSPR
LSRPRHRRPLLRSMSSAFCSLLAPERQVGRAATMLMQNRYTAVGQLVQDLLTQVRAGPEP
RELQGIRQALSRARAMLSAELGPEKLLPPEQLELVLEKSLHRSVLKPLRPILAARLRHRL
STDGSLGRLAEGFRLARTQGPGAFGSHLTLSCPVETEQVRQKLLQLLRAYSPSAQVKWLL
QACKLLYTALKTQAGENAGADEFLPLLSLVLAQCDLPDLLLEAEYMSELLEPTLLTGEGG
YYLTSLSASLALLSGLSQARALPLSPAQELQRSLTLWEQRRLPATHSFQHLLRVAYQDPS
TGCTSKTLAVPPGSSIATLSQLCATKFRVTQPDVFGLFLYKDQGYHRLPPEALAHRLPAT
GYLIYRRAERPETQGPVAEKAETGSKRPEAGAWEEVTGGLNSEGKPQIAVDQEGKDQAPG
GHIGPEEQKAEGSQALVE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacgcctgtgccttgggggttggattgtcttcctgagtcccaggagaagctgaag
gagctcccagccatggaagaccctggtgagaccggagaacaccctctgggagccaccagc
ctgaactttgtacctgggcaccaacagaaagaaaagccatctccagacccactgtatgac
acacctgatgtcagaggggtacaggcaggcgggtcccaacaaccagcgcgtactgtgagc
ctgcgggagcggctgctgatcacccggcctgtgtggttacagctgcgggccaacgctgca
gccgcgctgcacgtgctgaggaccgagcctccggggaccttcctggtgcggaaatctaac
actcgccagtgccaggctctgtgtgtgcggctgccagaagctagtggcccctcttttgtc
tccagccactatatcgaagagagtcctggcggcatctctttggagggctcagagctcatg
ttccctgaccttgtgcagctcatctgtggatactgctgtaccagggacattcttctcctc
cctctccgactccccagagccattcatcaggcagtcacccacaaagagctggaggccatc
tcccatctgggcatggagttctggagttcctcactcaacaccaaggaccaacagaggcct
tcggaagccccacccataccccggctgaaggctcgctcccctcaagagctggatcagggc
accggtgctgccctctgcttcttcaaccccctcttccccggggatctgggccccaccaaa
cgagagaaattcaagaggagtttcaaagtgcgtgtgtccacagagacctccagccctctg
tctccacctgctgtgccgcctcccccggtcccggtgctgccagggacatcttccagccaa
acggaaagactgccccctcgacagccgctgcagagggagagctcagtgggatatcgtgtg
ccaggaagtgctgccggcccaagtcttcctcccctaccttcccttcaggaggtggactgc
tgctctcccagcagctcagaggaggagggctcttcaggaagccctacaacctccccacgc
ctaagccgcccaaggcaccggcggcctctgcttcggtccatgagttctgctttctgctct
ctgctggcaccggagaggcaggtgggccgggcagccacaatgctaatgcaaaaccgatac
acagccgtgggtcagctagtgcaggacctactgacccaggttcgggctggtccggagccc
cgagagttgcagggcatccgccaggccctgagtcgggctcgggccatgctgagcgcagag
ctgggccctgagaagctgctaccaccggagcagctggaattggtcctggagaagtccctg
catcgctctgttctcaagcctcttcgacccattctagctgcccgcctgcggcaccggctt
tccacagatggttcccttggccgcctagctgagggcttccgcctggcccggacccaggga
cccggagccttcgggtcccacctgaccctttcttgcccagtggagacagagcaggtgcgc
cagaagctgctgcagctccttcgtgcctactcgcctagtgcccaggtcaagtggctcctg
caggcctgcaagttgttatacacagccctgaaaacccaggcaggagagaacgcaggcgct
gatgagttcctgcctctgctgagccttgttttggcccagtgcgaccttcctgacctcctg
ttagaagctgagtacatgtcagagctgctggaacccaccctgctcactggagagggtggc
tactacctgacgagcctctcagcaagcctggccttgttgagtggcctaagccaggcccgc
gcactgccactcagcccggcacaggagctccagcgctccctgaccctctgggaacagcgc
cgcctgccggccacccacagcttccagcatctcctccgagtagcctaccaggaccccagc
acaggttgcacctccaagaccctggctgtgcccccagggtcttcgattgccacgttgagc
caactctgtgctaccaagttccgagtgacccaaccagatgtgtttggcctcttcctctac
aaggaccagggctaccatcgcctgccccctgaagccctggcccacaggcttcctgcaact
ggctacctcatctatcgccgggcagaacgccctgagacccaggggcctgtagcggagaag
gcagagacaggcagcaagaggccagaggcgggagcatgggaggaggtgacagggggtctg
aacagtgaggggaaacctcagatagctgttgaccaagaaggcaaggatcaggccccagga
ggccacatagggccagaggaacagaaggcggagggaagccaggctttggtagagtag
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