Mus pahari (shrew mouse): 110339021
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Entry
110339021 CDS
T05929
Symbol
Ppfia1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110339021 (Ppfia1)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110339021 (Ppfia1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
110339021
NCBI-ProteinID:
XP_021078128
Ensembl:
MGP_PahariEiJ_G0013949
LinkDB
All DBs
Position
1:complement(113782009..113861723)
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AA seq
1266 aa
AA seq
DB search
MMCEVMPTISEAEGPSGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGLLDGNHEQESAPSTNGKRSSD
GSLSHEDLAKVLELQEVIDRQTREQSQMKERLASLSSHAAELEEDLDTARKDLIKSEEMN
TKLQREVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQTE
DKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKSGPLSSGSSAAKEAKLL
ELTSKLRKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLS
ESNERLQLHLKERMAALEDKNSLLREVENAKKQLEETQHDKDQLVVTIEALKTELEQMRL
RGPSLHHGRPHLGSVPDFRFSVADGHVDAYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQ
DWERAQQASVLANVAQAFESDVDVSDGEDDRDTLLSSVDLLSPSGQADAQTLAMMLQEQL
DAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPYPASSLAGSSPPG
SGRSTPRRVPHSPAREVDRLGVMTLPSDLRKHRRQLPASREEVRDDKTTIKCETSPPSSP
RPLRLDRMHKGALHTVSHEDIRDLRNSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSS
IGRLFGKKEKGRPGPLGKESPGQAGISETENSSQDALGLSKLGGQAEKNRKLQKKHELLE
EARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGIS
NPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVWLTHEEMETLTATPQTEDEEGSWAQT
LAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNS
FQCGIMCLRRLNYDRKELERKREESQNETRDVLVWSNDRVIRWILSIGLKEYANNLIESG
VHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLVMGTDRRFDEDDDKSFRR
APSWRKKFRPKDIRGLASGSAETLPANFRVTSSMSSPSMQPKKVQMDGSVSGAQRLDSAT
VRTYSC
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccaaccattagtgaagcagaaggcccttcaggaggaggtggg
agccatgggtcaggctccccttcacagccagacgctgattcgcattttgagcagctcatg
gtttccatgttggaagaacgggaccgccttctggacacactgagagagacacaagaaaca
ctggcattaacccaggggaaattgcatgaagttggtcatgaaagagattctttgcagagg
cagctcaacactgcacttccacaggagtttgctgcgctcacgaaggaactcaatgtgtgt
agggagcagcttctggagagagaggaagaaatcgccgagctgaaggcagagaggaacaac
actaggctgttgttggagcacctagagtgccttgtctccaggcatgagcgctctctccgg
atgacagtggtgaagaggcaggcacagtcacctgcaggcgtgtccagtgaggtggaggtg
ctgaaagccctgaagtcactgtttgaacaccacaaagccttggatgagaaggtacgagag
cgactgcgggtggctctggagaggtgcagcttgttagaagaggagctgggtgccacccac
aaagagctaatgattcttaaagaacagaataatcagaagaaaacactaacagatggactg
cttgatggaaaccatgaacaggaaagtgcaccaagcaccaacggcaagagatcttctgat
ggctccttgagtcatgaggatcttgccaaagtgctggagctgcaggaagtcatagacagg
cagacgagagagcagagccagatgaaggagcgcctggcctccctgtccagtcatgcagca
gagctggaagaggacctggacacagctagaaaagacctcatcaagtctgaagagatgaat
acgaaactgcagcgggaagtccgtgaagcaatggcccagaaagaggatatggaagagaga
atcaccacccttgagaaacgctacctcgccgcacagcgtgaagccacgtctgtgcatgac
ctcaatgacaaacttgaaaatgaaattgcaaataaagactccatgcaccgacagacagag
gacaagaaccgccagttgcaagagcgtctggagttggcagagcagaagctgcagcagacc
ctgcgcaaagctgagacgctgccagaggtggaggctgagctggcccagagggtggctgca
ctctccaagtctggtcctttgtcttctgggagttcagctgctaaggaagcaaaactgttg
gagcttacttccaagcttaggaaggctgaggagagacatggcaatattgaagagaggctg
cggcagatggaggcacaactggaggagaaaaatcaggagttgcagcgggcaaggcagaga
gaaaagatgaatgaggaacataataagcgcctgtctgacactgtggacaagctgctctcg
gaatccaatgagaggctgcagctgcatctgaaggagagaatggcagcgctggaggacaag
aattctctactaagggaagttgaaaatgcaaagaaacaactagaagagacccagcatgat
aaggaccaacttgtcgtgactattgaagccctgaagactgagctggagcagatgagactg
agaggtccttcactccatcatggccgaccccatttgggcagcgtcccggacttcaggttc
tctgtggcagacgggcatgtggatgcttacagcaccagtgcagtgttgcggcgcccccag
aagggccggctggcagcgctgcgggacgagccctccaaggtgcagaccctcaatgagcag
gattgggaacgggcccaacaagccagcgtcttggcaaatgtggcccaggcatttgagagt
gatgtcgatgtgtctgatggtgaagatgaccgagatacattgctcagctcagttgatctg
ctgtctcccagtggacaggctgatgcccagacactggccatgatgcttcaggaacagctg
gatgctatcaacaaagagatcaggctgatacaagaagagaaggagaatacagagcagcgg
gcagaggagatcgagagcagagtgggcagtggaagcttggacaatcttggtcgttttaga
tcaatgagctccatccccccctaccctgcttcctcgcttgctggctcctctcctccaggc
agtggtcggtccacaccaaggagggtccctcacagtcctgcccgggaggtggacaggctg
ggtgtcatgactctgcctagtgacttaaggaagcaccggagacagttgccagcttccaga
gaagaggtacgagacgacaagacgacgataaaatgtgaaacctctcccccctcctccccg
aggcccctgcgcttagacaggatgcacaagggcgcgctgcacacagtcagccatgaagac
atcagagacctgaggaactccacaggctcccaggatggtcccgtgagcaaccctagcagc
agtaatagtagccaagactctctccacaaagccccaaagaagaagggcatcaaatcctcc
attggccgcttgtttgggaagaaggaaaagggccggcctggtccactgggcaaggagtca
ccagggcaagctggtatttcagagacagaaaattcatctcaagatgccctgggactcagc
aaactgggaggacaagctgagaaaaaccgtaaacttcagaaaaagcatgaactgctggag
gaggcccgcaggcaaggcttgccttttgcacagtgggatgggcccacagtggtggtgtgg
ctagagctctgggttgggatgcctgcctggtatgtggctgcttgccgagcaaatgtcaag
agtggtgccatcatgtcagccctgtcagacactgagatccagcgggagatcggcatcagc
aaccccctgcatagactgaagctgcggctggccatccaagagataatgtcactgactagc
ccttctgctccacccacatccaggacgaccacaggaaatgtctggttgacacatgaagag
atggaaacgctcacagccacgccacaaacggaagacgaggagggaagctgggctcagact
ctagcgtatggagacatgaatcacgagtggatcggcaatgagtggctgcccagcctgggc
ctgccgcagtaccgcagctactttatggagtgccttgtagatgcccggatgctggaccac
ctgaccaagaaagacttgcgagggcaactgaagatggttgacagcttccacagaaacagt
ttccagtgtggaattatgtgcctgagaaggttgaattatgaccgaaaagaactggaaaga
aaaagagaagagagtcagaatgagacaagagatgtgcttgtgtggagcaatgaccgggtg
attcgctggatcctgtcaatcggccttaaagagtatgccaacaacctaatagagagtggt
gttcacggagcacttctggctttggacgagactttcgatttcagtgccttggcactcttg
ttacagattccaacgcagaatacgcaggctcgagctgtcttggaaagagaattcaacaac
cttttggtcatggggactgatcggaggtttgatgaggatgatgacaaaagcttcaggagg
gcaccttcctggaggaagaagttcagaccaaaggacatccgtggcttggcctctggctct
gcagagacgttgcctgccaacttccgggtcacctcctccatgtcatctccctctatgcag
ccaaagaaggttcagatggacggtagtgtgtccggagcacagaggctggactctgccaca
gtcaggacttactcctgctag
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integrated database retrieval system
