Mus pahari (shrew mouse): 110339041
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Entry
110339041 CDS
T05929
Symbol
Wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04136
Autophagy - other
mpah04140
Autophagy - animal
mpah05010
Alzheimer disease
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05017
Spinocerebellar ataxia
mpah05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110339041 (Wipi2)
04136 Autophagy - other
110339041 (Wipi2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110339041 (Wipi2)
05014 Amyotrophic lateral sclerosis
110339041 (Wipi2)
05016 Huntington disease
110339041 (Wipi2)
05017 Spinocerebellar ataxia
110339041 (Wipi2)
05022 Pathways of neurodegeneration - multiple diseases
110339041 (Wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110339041 (Wipi2)
03029 Mitochondrial biogenesis [BR:
mpah03029
]
110339041 (Wipi2)
Membrane trafficking [BR:
mpah04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
110339041 (Wipi2)
Mitochondrial biogenesis [BR:
mpah03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110339041 (Wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_RSE1_2nd
BCAS3_WD40
VID27
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
110339041
NCBI-ProteinID:
XP_021078151
Ensembl:
MGP_PahariEiJ_G0024536
LinkDB
All DBs
Position
23:32731292..32770837
Genome browser
AA seq
445 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLEAVREKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICSLTTIQKIPRLLVGASDGYLYMYNLDPQEGGECALMRQHRLDGS
METTSEIVDSASHDCPLATQTYGTAAAKGAYVPSSPTRLGKGQDTNLEAYTDDLGAVGGT
CLEDEASALRLDEDSEHPPMILRTD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagccagagcggagaggccggcgccggccagctgctgttcgccaacttc
aaccaggataacacgtccctagctgttggtagtaagtccgggtataagtttttctccctt
tcttctgtggataagctggaacagatctatgaatgcactgacactgaagatgtctgcatt
gtggagagattgttctcaagcagcttggtggccattgtcagcctcaaagctcccaggaag
ttgaaggtttgccactttaagaagggaactgagatatgcaactacagctactccaacaca
atactagctgtgaagctgaacaggcagaggctcatcgtgtgtctggaagagtcactctat
atacacaacatccgggacatgaaggtacttcataccatccgagagacacccccaaaccct
gcaggcttgtgtgcactgtcaataaacaatgacaactgctacttggcgtatccagggagt
gcgaccattggagaggtgcaggtcttcgacaccattaacttgagagctgcaaacatgatt
ccagctcatgacagtcccttagcagccctggcttttgatgcaagtgggaccaagcttgcc
actgcttctgagaaggggactgtgattcgggtgttttccattccagagggacagaagctg
tttgagttcaggagaggagtgaagaggtgtgtgagcatctgctccctggccttcagcatg
gacggcatgttcctctccgcatccagcaacaccgaaacagtgcacatcttcaaacttgag
gctgtgagggagaaacctccggaagagcccaccacctggactggctactttgggaaggtt
ctcatggcatctaccagctatctgccctcacaagtgacagaaatgttcaaccagggcagg
gcctttgccaccgtccgcctgccattctgtggccacaaaaacatctgctcactaaccaca
attcagaagatcccacggttgctggtaggagcatcagatggctatttgtacatgtacaac
ctggacccccaggaaggcggcgagtgtgcgctgatgcgtcagcacaggcttgatggcagc
atggagacaaccagtgagatcgtagactctgcatctcatgactgccccttagcaacgcag
acgtacggcacagcagctgccaaaggtgcctatgtgccctcgtcccccacaagacttggt
aaagggcaggacaccaatttagaagcctacacggatgacctgggtgctgtgggtggcaca
tgcctagaggatgaagccagtgctctgcgcctggatgaagacagtgaacatcctcccatg
attctccggactgactga
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