Mus pahari (shrew mouse): 110339101
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Entry
110339101 CDS
T05929
Symbol
Pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03030
DNA replication
mpah03410
Base excision repair
mpah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110339101 (Pole)
03410 Base excision repair
110339101 (Pole)
03420 Nucleotide excision repair
110339101 (Pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpah03032
]
110339101 (Pole)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110339101 (Pole)
Enzymes [BR:
mpah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110339101 (Pole)
DNA replication proteins [BR:
mpah03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
110339101 (Pole)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
110339101 (Pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
110339101
NCBI-ProteinID:
XP_021078258
Ensembl:
MGP_PahariEiJ_G0024125
LinkDB
All DBs
Position
23:147041..198870
Genome browser
AA seq
2282 aa
AA seq
DB search
MVLRNSGRRHPEPGAEGEGNRDDGPSSSVSALKRLERSQWTDKMDLRFGFERLKEPGERT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYMPYFYIAARKGCDREVSSFL
SKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTVEDLVKVRKEISPAVKKNREQ
DHASDEYTTMLSSILQGGSVITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVKFRGNAFPVEIARRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAIHGLSMYQEIGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQAYNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFQEVC
EQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPG
ASCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHMTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEMGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNPKKPKLTISYPGAMLNIM
VKEGFTNHQYQELTEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDNYKQKKISELFVLEGKRQIVMAQA
SENSLSLCTPDMEDIGITKPHHSTVPVATKRKRVWETQKESQDIALTVPWQEVLGQPPSL
GTTQEEWLVWLQFHKKKWQLQAQQRLARRKKQRLESAEDMPRLGAVREGPATGLGSFLRR
TARSIMDLPWQIIQISETRQAGLFRLWAIIGSDLHCIKLSIPRVFYVNQRVAKAEDGPSY
RKVNRALPRSNIVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQL
GCVCVVNKQLARHLLGWEAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHHAQGHKALFG
VFIPSQRRASVFVLDTVRSNQMPGLSALYSAEHSLLLDKVDPKLLPPPKHTFEVRAETNL
KTICRAIQRFLLAYKEERRGPTLIAVQSSWELCRLTSEIPVLEEFPLVPVRVADKISYAV
LDWQRHGARRMIRHYLNLDICLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFARHLQRHN
HLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSSGCYSTVCVELDIQNLAVNTILQ
SHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALASYDETALCSSTFRILKSMVVG
WVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEFKRLGS
SIIYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPSN
YGGIKGKVPSSIHCGQVKEQDSQAREETDGEEDNEKDEEEEDMGESEVEDLLENNWNILQ
FLPQAASCQSYFLMIVSAYIVAVYQSMKEELRHSAPGSTPVKRKGASQFTQEAKGATGAL
PGMITFSQDYVANELTQSFFTITQKIQKKVSGSRNSTEPSEMFPVLPGSHLLLNNPALEF
IKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVICHSCNFC
RDLDLCKDSSFSQDGAILPQWLCSNCQAPYDSSAIESALVEALQRKLMAFTLQDLVCLKC
HGMKETHMPVYCSCAGDFALTIRTEVFMEQIRIFQNIAKYYSMSYLQETIEWLLQTSPVS
NC
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgaggaacagtggacggaggcacccggagccgggcgcggagggcgaaggcaac
cgggatgatggtccctcttcctcagtctcagccctcaagcgtctggaacggagccagtgg
acagataagatggacttacggtttggttttgaaaggctgaaagagcctggagaaaggact
ggctggcttatcaacatgcaccctacggagattttagatgaagacaaacgcttagtcagc
gcagtagattactatttcattcaagatgatggaagcagatttaaggtggccttgccctat
atgccctatttctacattgcagcaagaaagggttgtgatcgggaagtttcatcttttcta
tccaagaagtttcagggtaaaattgcaaagttagagaatgtgcccaaagaagatctggat
ttgccaaatcacttggtgggcttgaagcggagttacatcaaactgtccttccatactgtg
gaggaccttgtcaaagtgaggaaggagatctctcctgctgtgaagaagaaccgagagcag
gaccatgctagtgacgaatatacaacaatgctctccagtattctgcaaggtggtagtgta
attactgatgaggaggaaacctctaagaagatagccgaccaattggacaacatagtggac
atgcgggagtatgatgttccctaccacatccgcctctccattgacctcaaaatccatgtg
gcccactggtacaatgttaaatttcgaggaaatgcttttcctgtggaaatcgcccgacgc
gatgatcttgttgaacgacctgaccctgtggttttggcatttgacatcgagacgactaaa
ctgcctctcaaattccctgatgctgagacagatcagatcatgatgatctcctatatgatt
gatggccagggctacctcatcactaacagggagattgtttcagaagatattgaagatttt
gagttcacccctaagccagaatatgaagggcccttttgtgtcttcaatgaacctgacgag
gtccatctgatccagagatggtttgagcatgtccaggagaccaaacctaccattatggtc
acctacaatggggatttttttgactggccatttgtggaggctagggcagcaattcatggc
ctcagcatgtaccaggagataggcttccagaaggatagccagggggaatacaaggcacca
cagtgcatccacatggactgcctcaggtgggtgaagagggacagttaccttcctgtgggc
agtcataatcttaaggcagctgccaaggccaaacttggctatgaccctgtagagctggac
cctgaggacatgtgtcgtatggccactgaacagccccagactctggccacttactcagtg
tcagatgctgtggctacttactacctgtacatgaaatacgtccatcccttcatattcgcc
ctgtgcaccattatccccatggaacctgatgaggtgctgcggaagggctctgggacattg
tgtgaagccttgctgatggtgcaagctttccatgccaacattgtcttccccaataagcaa
gaacaggcgtacaacaagctgacagatgatggccacgtgctagatgctgagacctacgtt
gggggccatgtggaggcactagagtctggtgtcttccgaagcgatatcccctgccggttt
aggatgaatcctgcagcctttgatttcctgctgcaacgagttgagaagactatgcgccac
gccattgaagaagaagagaaggtgcctgtggaacaagccaccaactttcaagaggtgtgt
gagcagattaagaccaagctcacctccctaaaagatgttcctaacagaattgaatgtcct
ctaatctaccatctagatgtgggggccatgtatcctaacataattcttaccaaccgccta
cagccttctgccatagtggatgaggccacctgtgctgcctgtgacttcaataagcctgga
gcaagttgccagaggaagatggcctggcagtggaggggagaattcatgccagccagtcgc
agtgaataccatcggattcagcatcagctggagtcggagaagtttccccctttgttccca
gaggggccagcacgagcctttcacgagctgtcccgtgaagaacaggctaaatacgagaag
aggaggctggcagattattgccgaaaagcctataagaagatccatatgaccaaggttgaa
gaacgtctaactaccatctgccagcgggaaaactcattttatgtggacacagtgcgggcc
ttcagagacaggcgctatgagttcaaaggactgcacaaggtgtggaagaagaagctctca
gcagctgtagagatgggcgatgcatcagaggtaaagcgctgcaagaacatggagatcctt
tacgattcactgcagctggctcacaagtgcatcctgaactccttctatggctatgtcatg
cgcaaaggagctcgctggtattccatggagatggctggtatcgtctgctttacaggagcc
aacatcatcacccaagcaagagaactgattgagcagatcgggaggcctttagaactggac
acagatggaatatggtgcgtcctacccaatagttttcctgaaaattttgtcatcaagaca
accaatccgaagaaacccaaactgaccatctcctatcctggtgccatgttgaacatcatg
gtcaaggaaggctttaccaaccaccagtaccaggaactaacagagccttcgtctctcacc
tatgtcacccgctctgagaacagcatcttttttgaagtcgatggaccataccttgctatg
atcctcccagcctccaaggaagaaggcaagaagctgaagaagagatatgctgtgttcaat
gaagatggttccttggctgaactgaaaggttttgaggtgaaacgccgaggggagttacag
ctgattaaaatcttccagtcctcagtttttgaggcgttcctcaagggcagcacactggag
gaagtgtatggctctgtggccaaagtggctgactactggctagatgtgctctacagcaag
gctgctaatatgccggattctgaattgtttgagctgatttctgagaaccgctccatgtct
cggaagctagaagattacggggagcagaagtctacatccatcagcacagcaaagcgcctg
gctgagttcctgggagaccagatggtcaaagatgctggactgagctgccgctatatcatc
tcccgaaagccagaggggtctcctgtcactgagagggccatcccacttgccattttccaa
gcagagcctacagtgaggaaacattttctccggaaatggctaaagagttcatcacttcaa
gactttgatattcggacaattctggactgggactactacatagagcggctggggagtgcc
atccagaaaatcatcaccatccccgcagcactgcagcaggtgaagaacccagttcctcgt
gtcaaacatccagactggctacacaaaaaactactagagaagaatgataactacaagcag
aagaagatcagtgagctcttcgtgcttgaaggaaagagacagattgtgatggcccaggct
tcagaaaacagtctgagtctctgcactccagacatggaagacattggaatcacaaagcca
caccactctacagtcccagttgctactaagaggaagcgagtctgggagacccaaaaggag
tctcaggatattgcactaactgtgccctggcaagaggtcttagggcagcctccctccctt
ggaaccacacaggaagagtggttggtctggctccaattccacaagaaaaagtggcagctg
caggcccaacagcgcctagcccgcaggaagaagcaacgcttagagtcagcagaagatatg
ccaaggcttggggctgtccgagaggggcctgccacaggactggggagctttttacgacgg
accgcccgcagcatcatggaccttccatggcagataatacagatcagtgagaccaggcag
gctggtctgttccggctgtgggctatcattggcagtgacttgcactgcatcaagctaagc
atccctcgagtgttctatgtaaaccagcgggtagccaaggcagaagatgggccttcatat
cgaaaggtgaatcgggctcttcctcgttccaacattgtctacaatctctatgagtattca
gtaccagaggacatgtaccaagaacacatcaacgagatcaacactgagttgtcagcacca
gacattgagggcgtgtatgagacgcaggtcccattgttattccgggccctcgtgcagctg
ggctgtgtgtgtgtggtcaacaaacagctggcaaggcaccttttgggctgggaagctgaa
acctttgccctcgagcaccttgaaatgcgttctctggcccagttcagctacttggaacca
gggagtatccgccacatctacctgtaccatcacgcacagggccacaaggcactctttggg
gtctttatcccctcacagcgaagagcatctgtgtttgtgctggatactgtacgaagcaac
caaatgccagggctcagtgccctgtactcagcagaacacagcctgctgctggacaaggtg
gaccccaagctcctgcctcccccaaaacacacctttgaagttcgtgcagaaaccaacctg
aagaccatctgcagagccatccagcgcttcctgcttgcctacaaggaagagcgccggggg
cccacactcatcgctgtccagtctagctgggagctgtgtaggctgaccagtgagattcca
gtcttagaagagtttccactagtgcctgtccgagtggctgacaagatcagctatgcagtc
ctggactggcagcgccatggagctcgccgaatgatccggcattacctcaatttagacatt
tgcctttcacaggcctttgagatgagcaggtacttccacatccccgttggaaacctgcca
gaagatatctccacctttggctctgacctcttttttgcacgccacctccagcgccataac
cacctgctttggctgtcccctacctctcggcctgacctgggtgggaaggaagctgatgac
aaccgccttgtcatggagtttgatgaccgagccactgtggagatcaatagttctggctgt
tactctactgtgtgcgtggagctggacattcaaaatctggcagtcaacacgatcctccag
tcccaccatgtcaatgacatggagggggctggcagcatgggcatcagcttcgatgtgatc
cagcaggcctccctagaggacatggtgacaggcaatcaagctgccagtgccctcgccagc
tacgatgagacagccctttgctctagtaccttcaggatcctgaaaagcatggtggttggc
tgggtaaaggaaatcacacagtaccacaacatctatgctgacaaccaggtaatgcacttc
taccgctggctccagtcaccgtgctctctgctccatgacccagcccttcaccggacactg
cacaatatgatgaagaagctcttcctgcagctcattgctgagttcaagcgcctggggtca
tcaatcatctatgccaacttcaatcgcatcatcctctgtacaaagaagcgccgaatagag
gatgcccttgcctatgtggaatatattaccaacagcatccattctaaagagatctttcat
tccctgacaatctctttctctcgatgctgggaattccttctctggatggatccatccaac
tatggtggaatcaaaggaaaagttccatccagtattcactgtggacaggtaaaagagcaa
gactcccaggcaagggaggaaactgatggtgaggaggacaacgaaaaggacgaggaggaa
gaggacatgggggaatctgaggttgaggacttattggagaacaattggaacattctacag
ttcttgccccaggcagcctcttgccagagctacttcctcatgattgtttcagcatacatc
gtagctgtgtaccaaagtatgaaggaggagttgagacacagtgccccaggcagtacccct
gtgaagaggaagggagccagccagttcacccaggaggctaaaggggcaaccggagctctt
cctggaatgatcactttctctcaagattatgtggcaaatgagctcactcagagcttcttc
accattactcagaaaattcagaagaaagtctcaggttctcgaaacagcactgagccctca
gagatgttccctgtcctccctggttcacacttgctgctcaataatcctgctctggagttc
atcaaatacgtgtgcaaggtactgtctctggatacaaacatcacaaatcaggtgaataag
ctgaacagagacctacttcgcctggtagacgttggtgaattctctgaggaggcccagttc
agagacccctgccactcctatgtgctccctgaggtaatctgccacagctgtaatttctgc
agagacctggacctgtgcaaagattcctctttctctcaggatggagccatcctgcctcag
tggctctgctccaattgtcaagccccctatgactcatctgccattgagtcagccttggtg
gaagccctgcagaggaaactgatggccttcactcttcaggacctggtatgcctcaagtgc
catggtatgaaagagacccatatgcctgtgtactgcagctgcgcaggggactttgctctc
accatccgcactgaggtcttcatggaacagattagaatcttccagaacattgccaagtac
tacagcatgtcttatctccaggagaccatagaatggctgctacagacaagccctgtatca
aactgttag
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integrated database retrieval system
