Mus pahari (shrew mouse): 110339114
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Entry
110339114 CDS
T05929
Symbol
Taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110339114 (Taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110339114 (Taf6)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110339114 (Taf6)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110339114 (Taf6)
Coactivators
SAGA/TFTC/STAGA complex
110339114 (Taf6)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110339114 (Taf6)
STAGA complex
110339114 (Taf6)
TFTC complex
110339114 (Taf6)
SAGA complex
110339114 (Taf6)
SLIK complex
110339114 (Taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Bromo_TP
TFIID-18kDa
Histone
Motif
Other DBs
NCBI-GeneID:
110339114
NCBI-ProteinID:
XP_021078290
Ensembl:
MGP_PahariEiJ_G0024480
LinkDB
All DBs
Position
23:complement(28268543..28277519)
Genome browser
AA seq
678 aa
AA seq
DB search
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG
KGQGATAADGKGKEKKAPPLLDGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLRPPPDNQDAYRGEFGSLGPLLCSHVVKARAQAALQAQQVNRT
TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV
MSSSSSASSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPAGS
GSVQKYIVVSLPPTGEGKGGPPSHPSPVPPSSSSPSPLGGSTLCGGKQEAGDSPPPAPGT
PKANGSQPTGPGSPQPAL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagaagaaactgaaactcagcaatactgtgttgccctctgagtccatgaag
gtggtggcagaatctatgggcattgctcagattcaggaggagacttgccagctactgaca
gatgaggtcagctaccgcatcaaggagattgcccaggatgctttgaagttcatgcacatg
gggaaacgacagaagctcactaccagtgacattgactatgcattgaagttaaagaatgtg
gagccactgtatggcttccatgctcaggagttcatccctttccggtttgcctctggtggg
ggccgagagctgtacttctatgaagagaaggaagtggacctgagtgacatcatcaacacc
cctctgcctcgggtgcctctggatgtctgcctcaaagctcattggctaagcatcgaaggc
tgccagccagctataccagagaatccacccccagctcccaaagagcagcagaaggctgag
gccacagaacccctgaaatcagcaaagccaggccaagaagaagatggacccctgaaaggc
aaaggtcaaggggcaactgcagctgatggcaaaggaaaagagaagaaggcacctcccttg
ctggatggggcccctttccgcctgaagccccgaagcatccatgagctgtctgtggagcag
cagctgtattacaaggagatcacggaagcctgtgtgggatcctgtgaggccaagagagcg
gaagctctgcagagcattgccacggacccagggctctatcagatgctaccacggttcagt
accttcatctcagagggggtccgtgtgaatgtggttcagaataacctggccttgctcatc
tacctgatgcgtatggtaaaggccctgatggacaaccccacactgtatctagagaaatat
gtgcatgagctgattccagcagtaatgacctgcattgtgagtagacagctgtgcttgcga
ccagatgtggacaatcactgggcactccgggattttgctgcccgtctagtggcccagatc
tgtaagcatttcagcacaaccaccaacaacatccaatcccgaatcactaagacctttacc
aagagctgggtagatgagaagactccatggacaactcgatatggctccattgcaggcctg
gcagagctgggacatgatgtgattaagacgttaattctgccaaggctgcagcaggaaggg
gaacggatccgcagtgtcttggatgggcctgtgctgagcaacatcgaccgtattggagca
gaccatgtgcagagccttcttctgaaacactgtgccccagtactggcgaagctgcgccct
ccacctgacaatcaggacgcctaccggggagaatttgggtccctggggccccttctctgc
tcccatgtggtgaaggccagggcccaggctgctctacaagctcagcaggtcaacaggacc
acactcaccatcacacagcctcggcccacactgaccctttcacaggcccctcagccaggc
cctcgtacccctggcttattgaaggtccctggctccattgccttgcctgttcagacactg
gtgtctgcgagagctgctgctcctcctcagccttctcctcctccgaccaagtttattgta
atgtcctcatcttccagtgcctcatcaacccagcaggtcctgtccctcagcacctcagct
cctggctcaggctctaccactacctctcctgtcaccaccacggttcccagcgtgcagccc
attgtcaagctggtctccactgctaccactgcacccccaagcacagctcctgctggttct
ggcagtgttcagaaatacattgtggtctctcttcccccaacaggggaaggcaaaggaggc
cctccttctcatccttctccagtccccccttcatcttcttcaccatccccacttgggggc
agtaccctctgtggggggaagcaggaagctggggacagcccccctccagctccagggact
ccaaaggctaatggctcccagcctactggacctggctctccccagcctgctctgtga
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integrated database retrieval system
