Mus pahari (shrew mouse): 110339143 Help Entry 110339143         CDS       T05929                                  Symbol Cux1 Name (RefSeq) protein CASP isoform X1   KO K09313   homeobox protein cut-like Organism mpah  Mus pahari (shrew mouse) Brite KEGG Orthology (KO) [BR:mpah00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:mpah03000]     110339143 (Cux1) Transcription factors [BR:mpah03000]  Eukaryotic type   Helix-turn-helix    Homeo domain CUT     110339143 (Cux1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CUT Homeodomain Homeobox_KN ATG17_like Motif Other DBs NCBI-GeneID:  110339143 NCBI-ProteinID:  XP_021078333 Ensembl:  MGP_PahariEiJ_G0024440 LinkDB All DBs Position 23:complement(26421734..26743044) Genome browser AA seq 1608 aa AA seqDB search MERASGPLRAAFSSPVFESKAPGAPLDCKETDCGSPSPRGDGIGASQSAAELPACPEDAI LPATPHRNQLLALGVLPASASSAFAAPGQPQDSARWMLCVAGAKLKRELDATATVLANRQ DESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLTVYKR LIDVPDPVPALDVGQQLEIKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKE KIREYEQTLKSQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKLQTLQTAL EKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSL QLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQI SQLEQQLNAKNSTLKQLEEKLKGQADYEEVKKELNTLKSMEFAPSEGAGTQDSTKPLEVL LLEKNRSLQSENATLRISNSDLSGSARRKGRDQPESRRPGPLPASPPPQLPRNTGEQVSN TNGTHHFSPAGLSQDFFSSNLASPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTS TIFSTGPYSTNSISSPSPVQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQL IKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALR SIQGRQRENPGQSLNRLFQEVPKRRNGSEGNITTRIRASETGSDEAIKSILEQAKRELQV QKTAEPVQTSSTSSSGNSDDAIRSILQQARREMEAQQAALDPALKPAPLSQPDLTILTPK HLSASPMSTVSTYPPLAISLKKTPTAPEASTAALPSAPALKKEAQDVPTLDPPGSADAAQ GVLRPVKSELVRGSTWKDPWWSPIQPERRNLTSSEEPKADETTASGKERPSSSQPRAERS QLQGPSASAEYWKEWPSAESPYSQSSELSLTGASRSETPQNSPLPSSPIVPMAKPAKPSV PPLTPEQYEVYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKP WSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVASLQDPLQQGCVSSESTP KTSASCSPAPESPMSSSESVKSLTELVQQPCPTIETSKEGKPPEPSDPPASDSQPATPLP LSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLAR PKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPS VGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTST VINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSSSRAAPSSEGDSCDGVEATDA EEPGGNIVATKSQGGPAEVAAAPADREEATQPAEKAKAQPLCSGTPGQDDGDDAGRPRPP PEGLADAPAPVPNLAAPAAGEDAATSATVPATEAPGAARAGPAERSSALPSTSAPARRPS SLQSLFGLPEAAGARDNPVRKKKAANLNSIIHRLEKAASREEPIEWEF NT seq 4827 nt NT seq  +upstreamnt  +downstreamnt atggagcgcgcgtcaggtccgctccgagctgccttctccagcccggttttcgaaagcaaa gccccgggggccccgctggactgtaaggagactgattgtggttccccatcgcctcgaggg gatggtatcggggcttcccaatccgcggcggagctgcctgcgtgcccagaggatgctatt ctgcctgccacccctcatcggaaccagctgctcgccctcggggtcctccctgctagtgct agctccgcgttcgcggctcctggacagccccaggattctgccaggtggatgttgtgcgta gccggagccaagttgaagagagaacttgatgccaccgcaacagtattggcaaacaggcaa gatgagagcgaacagtccagaaagcggctcattgagcagagccgagaatttaagaagaac actccagaggatttacgcaagcaggtagcaccactgctcaagagcttccaaggggagatt gatgcactgagtaaaagaagcaaggaagcagaggcagccttcttgactgtgtataagaga ctaattgatgttccagatccggtaccagccctggacgtcgggcaacagctggaaataaaa gtgcagcgtctacacgacattgaaacagagaaccagaaacttagggaaacactagaagag tacaacaaggagtttgctgaagtgaaaaatcaagaggttacgataaaagcacttaaggag aaaatccgagaatacgagcagaccctgaagagtcaggccgagaccatcgctctggagaag gagcagaagctacaaaatgattttgcagagaaggagagaaagctgcaagagacacagatg tccaccacctcaaaactggaggaagctgagcacaaactccagactctgcaaacagccctg gaaaaaactcgaacagaattatttgacctgaaaaccaaatatgatgaagaaactactgca aaggccgatgagatcgagatgatcatgactgaccttgaacgagccaaccagagggcagag gtggcacagagagaggcagagactctaagggaacagctctcatcggccaaccactctctc caactggcctcgcagatccagaaggctccagatgtggagcaggccatagaggtgctgacc cgatccagcctagaagtagagttggctgccaaagagcgggagatcgcccagctggtggaa gatgtgcagcgactccaggccagcctcaccaagctgcgtgagaattctgccagccagatc tcacagctggagcagcagctgaacgccaagaatagcacactcaaacaactggaagaaaaa ctcaaaggccaggctgactatgaagaagtgaagaaagagctgaacaccctgaagtccatg gagtttgcaccgtcagagggagcaggaacacaggactctaccaagcccctcgaggtttta ctcctggagaagaaccgctcgcttcagtccgagaatgcgacgctgcgcatctccaacagt gacctgagcgggtcagccaggagaaaagggagagaccagcctgagagtcggcgcccggga cccttgccggcctcccctcctcctcagttgccccgcaacacgggggaacaggtttccaat actaacggtacacaccacttctcaccagcggggttaagtcaagactttttcagctcaaac ctggccagccccagcctacccctggcttctacaggaaagtttgcactaaactctcttctc cagcgacagctaatgcagtccttctactccaaggccatgcaggaagccggaagcacaagc acgattttttcaacaggtccttacagcacaaactccatatcttccccaagcccagtacaa caaagcccagacgtaaatggcatggccccatctcccagccaatcagaaagtgctgggagc gtctcagagggtgaggaaattgatacagcagaaatcgcccggcaggtcaaagaacaacta atcaagcacaacattggccagcgcatttttggacattacgtcttgggactgtctcaaggg tctgtgagtgagattctggcccggccaaagccctggaataagctgactgtccgtggcaag gagccattccacaagatgaagcagttcctgtctgatgaacagaacatcctggcactccgt agcatccaaggcagacagagagagaatccaggccagagcctgaacagactctttcaggaa gtaccgaaacgaagaaatgggtctgaaggtaacatcactacccggatccgagcatctgag actggttctgatgaagccatcaagtccatcctggaacaagccaagagggaactacaagtg cagaaaaccgctgagccagtccagacatcttccacgtccagcagtggaaactctgacgat gccatccgctccatcctacagcaggcccgccgggaaatggaggcccagcaggctgccctt gaccctgccttaaagccagcaccactgtcccagcccgacctcaccatcctcacccccaag cacctgtctgcctctcccatgtctactgtgtccacttacccacctcttgccatctccctg aagaaaacccctacagcacctgaggccagtaccgcagccttgcccagtgccccagctctc aaaaaagaggctcaggatgtacccacactggacccaccaggatcagctgatgctgcccag ggagtgctgaggccggtgaagagtgagctagtccgtggcagcacctggaaggatccctgg tggagccctatacagcctgaaagaagaaatctcacttcttccgaagagcccaaggccgat gagacaactgcaagcgggaaagaaaggccaagcagcagccagcctcgggctgagcgcagc cagcttcagggaccctcagcatccgcagagtactggaaagagtggcccagcgctgagtcc ccatactcccagagctcagagctgagcctcactggagccagccgcagtgagacaccccag aatagccctctgccctcttccccaattgtgcccatggcgaagccagccaagccttcagtg cccccgctgactcctgagcagtacgaggtctacatgtatcaggaagtggacactatcgag ctcactcggcaggtcaaagagaagttggccaagaacggcatttgccagaggatctttggg gagaaggtactgggcctgtcccagggcagtgtcagcgacatgctctcaaggccaaaacca tggagcaaactgacccagaaaggccgagaacccttcatccggatgcagctctggctgaat ggagagctgggccaaggtgttctgccggtgcaagggcaacagcaagggccagtcctccac tcagtggcgtctctgcaggaccccctccagcagggctgtgtgagctcagaaagcactcca aagacctctgccagctgcagccctgcccctgagtccccaatgagttccagcgaatccgtg aagagtctcaccgagctggtccagcagccctgtcccaccattgagaccagtaaagaaggc aaaccaccagaacccagtgacccacccgcctcagactcccaacccgcaacaccgctgcct ctctctggacactcagccctcagcatccaagaactagtagccatgtctcctgagctggac acgtacggcataaccaagagggtcaaagaggtgctgacagacaacaacctcggtcagcgc ttatttggggagaccattttggggctcacccagggttctgtctccgacctccttgcccgc ccaaagccctggcataaacttagtctgaaaggacgggaaccctttgtccgcatgcagcta tggctgaacgaccccaacaatgtggagaagctgatggatatgaagcggatggagaagaaa gcctacatgaagaggcgacacagttctgtcagtgacagtcagccttgtgagcccccctct gtgggtatcgactacagccagggcgccagcccccagccacaacaccagctgaagaaacct cgtgtggtgctggctccagaggagaaggaagcgctgaagcgagcatatcagcagaagcca tacccgtcccccaaaaccatcgaggaactcgccacacaactcaacctgaagaccagcacc gtcatcaactggttccataattacaggtctcggatccgcagagaactgttcattgaggag attcaagctggaagccagggccaggccggtgccagcgactcaccttcagctcgaagtagc agccgcgctgcacccagctcggaaggcgacagctgtgacggcgtggaagccacggacgcc gaggagccgggtggcaacatagtggccaccaagtctcagggagggccggcagaggtggcc gcagccccggcagaccgggaagaagcgacgcagccggccgagaaggcgaaggcacagcca ctatgctcggggaccccaggacaggacgacggtgacgacgcgggccggcctaggccacct cccgagggcctcgccgacgccccagcgcccgtgccaaacctcgccgcacccgcggccgga gaggacgccgctacctcagccactgtcccggccaccgaggcccccggggcggccagggcg ggccctgccgagaggagttctgcgttgccaagcaccagcgcgcccgcgcgaaggcccagc tcactgcagagcctcttcggtctgcccgaggccgcgggcgcccgggacaaccctgtgcgg aagaagaaggctgcgaacttgaacagcatcatccaccgcctggagaaggcagccagccgg gaggagcccatcgaatgggagttctga

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