Mycolicibacillus parakoreensis: MIU77_01695
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Entry
MIU77_01695 CDS
T07959
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpak
Mycolicibacillus parakoreensis
Brite
KEGG Orthology (KO) [BR:
mpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpak03032
]
MIU77_01695 (topA)
03400 DNA repair and recombination proteins [BR:
mpak03400
]
MIU77_01695 (topA)
Enzymes [BR:
mpak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MIU77_01695 (topA)
DNA replication proteins [BR:
mpak03032
]
Prokaryotic type
DNA Topoisomerases
MIU77_01695 (topA)
DNA repair and recombination proteins [BR:
mpak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MIU77_01695 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ULN54410
LinkDB
All DBs
Position
348444..351242
Genome browser
AA seq
932 aa
AA seq
DB search
MRRLVIVESPTKARKIAGYLGGGYVVESSRGHIRDLPRTAADIPARYKTEPWARLGVNVD
GGFEPLYIVSPDKKSTVRELKDLLKSVDELYLATDGDREGEAIAWHLLETLKPKIPVKRM
VFHEITEPAIRAAAEHPRDLDTDLVDAQETRRILDRLYGYEVSPVLWKKVAPKLSAGRVQ
SVATRIIVARERDRMAFRSASYWDVVAGLDASVSDPAASPPQFTARLVSVDGRRVATGRD
FDSLGAVKKPDEVVVLDEAAATAVADRLQGAALSVASVEEKPYTRRPYAPFMTSTLQQEA
GRKLRFSAERTMGVAQRLYENGYITYMRTDSTTLSASAIEAARTQARQLYGDEFVAASPR
QYTRKVKNAQEAHEAIRPAGDTFATPDAVRGELDSDDFRLYELIWQRTVASQMADARGTT
LSLRIGGAAGDAQVVFAASGRTITFAGFLKAYVETVDELAGGEADDAERRLPNLTEGQQV
NAVEATPDGHATNPPARFTEASLVKALEELGIGRPSTYSSIIKTIQDRGYVHKKGSALVP
SWVAFAVTGLLEQHFSRLVDYDFTAAMEDELDEIAAGHERRTDWLSKFYFGGEHGSHQSV
ARAGGLKTLVGVNLEEIDARKINSIKLFTDDQGRDIYVRVGKNGPYLERMVTGDDGEPTP
QRANLNVALTPDELTLELAEKLFATPQEGRVLGVDPDTGHEIVVKDGRYGPYVSELLPKP
DESAAESAGAKAPAKKGRGKKAAGPKPRTGSLLRSMSVETVTLADALKLLSLPRVVGVDP
DSGEEITAQNGRYGPYLKRGTDSRSLATEEQLFTITVEEALKLYAEPKRRGRQGAAAPPL
RELGTDPGSGKPMVVKDGRFGPYVTDGETNASLRKGDDATTITDERAAELLAERRARGPA
KRTRKAPAKKTAAKKTAAKKTAAKSTRATKRS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgactcgtcattgtcgagtcgcccaccaaggcacgcaaaatcgccgggtacctc
ggcggcggatacgtcgtggaatcctcgcgcgggcacatccgggatctgccgcgcaccgcc
gccgacatccccgccaggtacaagaccgagccgtgggcgcggctcggggtgaacgtcgac
ggcggattcgagccgctctacatcgtcagccccgacaaaaaaagcaccgtgcgcgagttg
aaggacctgctcaaaagcgtcgatgagctctatctggccaccgacggtgaccgggagggc
gaggcgatcgcctggcatctgctcgagacgttgaaaccgaagatcccggtcaaacggatg
gtgttccacgagatcaccgagccggcgatccgggcggccgccgagcacccccgtgatttg
gacaccgacctcgtcgacgcccaggagacccggcgcatcctcgaccggctctacggctac
gaggtcagcccggtgctgtggaagaaggtcgccccgaagctctccgccgggcgggtgcag
tcggtggccacccgcatcatcgtggcccgggaacgcgaccggatggcgttccgcagcgcg
tcctactgggacgtggtggccggcctcgacgccagcgtctccgacccggcggccagcccg
ccgcagttcaccgcccggctggtcagcgtcgacggccggcgggtggcgaccgggcgcgac
ttcgactcgttgggcgcggtgaaaaaacccgacgaggtggtggtgctcgacgaggccgcg
gccaccgcggtcgccgaccggctgcagggggcggcgctctcggtcgcctcggtggaggag
aagccctacacccgccggccctacgccccgtttatgacctccacgctgcagcaggaggcc
ggccgcaagctgcggttctccgccgagcgcaccatgggggtcgcccagcggctctacgag
aacggctacatcacctacatgcgcaccgactcgacgacgctgtcggcgtcggcgatcgag
gcggcgcgcacccaggcccgccagctctacggcgacgagttcgtggcggcctcgccgcgc
cagtacacccggaaggtgaagaacgcccaggaggcgcacgaggccatccgcccggccggc
gacacgttcgccacccccgacgcggtgcgcggtgaactcgacagcgacgacttccggctc
tacgagttgatctggcagcgcaccgtcgcctcccagatggccgacgcccgcggcaccacg
ctgagcctgcgcatcggcggcgccgccggcgatgcgcaggtggtgttcgccgccagcggt
cgcaccatcaccttcgccgggttcctcaaggcctacgtggagaccgtcgacgagctcgcc
ggcggggaggccgacgacgccgagcggcgcctgcccaacctcaccgagggccagcaggtc
aacgccgtcgaggcgacccccgacggccacgccaccaatccgcccgcccgcttcaccgag
gcgtcgctggtcaaggccctcgaagagctcgggatcgggcgcccgtcgacctactcctcg
atcatcaaaaccatccaggaccgcggctacgtgcacaaaaagggcagcgcgctggtgccg
tcgtgggtggcgttcgcggtgaccggtctgctggagcagcacttctcccggctcgtcgac
tacgacttcaccgcggcgatggaggacgaactcgacgagatcgccgccggccacgagcgg
cgcaccgactggttgagcaagttctacttcggcggcgagcacgggtcgcaccagtcggtg
gcccgcgccggcgggttgaagacgctggtcggggtgaacctggaggagatcgacgcccgc
aagatcaactcgatcaagctgttcaccgacgaccagggccgcgacatctacgtgcgggtc
ggcaagaacgggccgtatctggagcggatggtcaccggcgacgacggggaaccgaccccg
cagcgggccaacctcaacgtcgcgctcacccccgacgagctgaccttggagttggccgag
aaactcttcgccaccccgcaggaggggcgggtcctcggggtcgaccccgacaccggccac
gagatcgtcgtcaaggacggccgctacgggccctacgtcagcgagctgctgcccaaaccc
gacgagtccgccgccgagtccgccggcgccaaggccccggccaagaagggccggggcaaa
aaggccgccggccccaagccgcgcaccggctcgctgctgcgcagcatgtcggtggagacg
gtcaccctcgccgacgcgttgaagctgctgtcgctgccgcgggtggtcggggtcgatccc
gactccggcgaggagatcaccgcgcagaacgggcgctacgggccgtatctgaagcggggc
accgattcgcgctcgctggccaccgaggagcagctgttcacgatcaccgtcgaggaggcg
ttgaagctctacgccgaaccgaagcggcgcggccggcagggcgcggccgccccgccgctg
cgggagttgggcaccgatccgggctcgggcaagccgatggtggtcaaggacggccggttc
ggcccctacgtcaccgacggggagaccaacgccagcctgcgcaagggcgacgacgcgacg
acgatcaccgacgagcgggcggcggagctgctcgccgaacgccgcgcccgcggaccggcg
aaacggacccgcaaggccccggcgaagaagacggccgccaaaaagaccgccgcgaagaag
accgccgcgaaatccacccgggcgaccaaacgctcctga
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