Mycolicibacillus parakoreensis: MIU77_02195
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Entry
MIU77_02195 CDS
T07959
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpak
Mycolicibacillus parakoreensis
Pathway
mpak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIU77_02195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpak03019
]
MIU77_02195
03400 DNA repair and recombination proteins [BR:
mpak03400
]
MIU77_02195
Enzymes [BR:
mpak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MIU77_02195
Messenger RNA biogenesis [BR:
mpak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MIU77_02195
DNA repair and recombination proteins [BR:
mpak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MIU77_02195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
KORA
Motif
Other DBs
NCBI-ProteinID:
ULN53199
LinkDB
All DBs
Position
450980..453082
Genome browser
AA seq
700 aa
AA seq
DB search
MSFSTGGAARADAQAILEQLAGPDAVLREDQWAAIEALVTHRRRALVVQRTGWGKSAVYF
IAAKLLRGRGHGPTVIISPLLALMRNQVDAAQRAGVRAATINSSNVTDWADVQARIGAGG
LDVLLVSPERLNNPGFRDEVLPALAAGAGLVVVDEAHCVSDWGHDFRPDYRRIRTLLAEL
GTGIPVLATTATANDRVVDDVARQLGVGGDHDTLVLRGGLDRDSLRLSVVAAGGPAQRAA
WIGAHLDELPGSGIVYTLTVAQAHDVAADLRAQGFAVAAYTGSTDAAEREQLEADLLADR
VKALIATSALGMGFDKPDLGFVIHLGAPSSPIAYYQQVGRAGRATAHAEVILLPGPEDQD
IWRYFASLAFPPETVVRKVIGELSADRPLSTPALEPLVDLNRSRLEMVLKVLDVDGAVRR
VTGGWLATGAPWSYDEQRYRTLAELRRAEQQAMLGYQRTAECRMSFLRAQLNDPHLRDGQ
RCGRCDNCAGPRFGAEVDAAAAAATGRRLLRPGVEITPRRQWPTGLGRLGVDLSGRISDG
PAPGRVIGRLTDLGWGARLRALLDGPDRQVPEEVVRAAVAVLAAWDWETRPTAVLGMDSA
TRPVLIGSLADRLAELGRLTRLATLGYAPGRGPVRAANSAYRVAGLQGCWRPPAGIPAGT
GPVLLVDDVTDTGWTLTMAARVLRAAGAPQVLPFALAAVR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
gtgtccttttcgaccggcggcgccgcgcgcgccgacgcccaggcgatcctcgagcagctc
gccggccccgacgcggtgctgcgtgaggaccagtgggcggcgatcgaggccttggtgacc
caccgccgccgcgcgctggtggtgcagcgcaccgggtggggcaagtcggcggtgtacttc
atcgcggcgaaactgctgcgcggccgtgggcacgggccgacggtgatcatctcgccgctg
ctggcgttgatgcgcaaccaggtcgatgccgcccagcgcgccggcgtgcgcgccgcgacc
atcaactcctcgaacgtgaccgactgggccgacgtgcaggcccgaatcggcgccggcggc
ctcgacgtgctgctggtcagcccggaacggctcaacaaccccgggttccgcgacgaggtg
ctgcccgccctggccgccggggccgggctggtcgtcgtcgacgaggcccactgcgtctcc
gactgggggcacgacttccgcccggactaccggcgcatccgcaccctgctcgccgagctg
ggcaccggcatcccggtgctggccaccaccgcgaccgccaacgaccgggtggtcgacgac
gtggcccgccaactcggggtcggcggcgaccacgacaccctggtgctgcgcggcggactg
gaccgcgactcgctgcggctgtcggtggtggccgccggcggcccggcgcagcgggccgcc
tggatcggcgcacacctcgacgagctgcccggctccgggatcgtctacaccctcaccgtc
gcccaggcccacgatgtggccgccgacctgcgcgcccaggggttcgcggtggccgcctac
accgggtccaccgacgccgccgagcgcgagcaactcgaggccgacctgctggccgaccgg
gtcaaagcgctgatcgccacctcggcgctgggcatggggttcgacaagcccgacctcggg
ttcgtcatccacctcggtgccccgtcgtcgccgatcgcctactaccagcaggtcgggcgg
gccgggcgcgccaccgcccatgccgaggtcatcctgctgcccggcccggaggaccaggac
atctggcgttacttcgcgtcgctggcgttcccgccggagacggtggtgcgcaaggtgatc
ggtgagctgtccgccgaccggccgctgtcgacgccggcgctggagccgctggtcgacctc
aaccggtcgcggctggagatggtgctcaaggtcctcgacgtcgacggcgcggtgcgccgg
gtcaccggcggctggctggccaccggagcgccgtggagctacgacgagcagcgctaccgc
accctcgccgagctgcgccgcgccgaacagcaggcgatgctcggctatcagcgcaccgcc
gagtgccggatgagcttcctgcgggctcagctcaacgacccgcacctgcgcgacgggcaa
cgctgcggccgctgcgacaactgcgccgggccgcggttcggcgccgaggtggatgccgcc
gccgcggcggccaccgggcggcggctgctgcgccccggcgtggagatcaccccgcgccgg
cagtggccgaccgggctgggccggctcggtgtcgatctgtccggccggatcagcgacggc
ccggcgccggggcgggtgatcgggcggctcaccgacctgggctggggggctcggctgcgg
gcgctgctcgacgggccggaccggcaggtgcccgaggaggtggtgcgggcggcggtcgcg
gtgctggcggcctgggactgggaaacgcggcccaccgcggtgctgggaatggattcggcc
acccgtccggtgctgatcggatcactggccgaccggctggccgaactcggccggctgacc
cgactggccacgctgggctacgcgccgggccgggggccggtgcgcgcggcgaactcggcc
taccgcgtcgcgggcctgcagggctgctggcgcccgcccgccggtatcccggcggggacc
ggcccggtgctgctggtcgacgacgtcaccgacaccgggtggacgctgacgatggcggcc
cgggtgctgcgcgcggccggggcgccgcaggtgctgcccttcgcgctggccgccgtccgc
tga
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