Mycolicibacillus parakoreensis: MIU77_04835
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Entry
MIU77_04835 CDS
T07959
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpak
Mycolicibacillus parakoreensis
Pathway
mpak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIU77_04835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpak03019
]
MIU77_04835
03009 Ribosome biogenesis [BR:
mpak03009
]
MIU77_04835
Enzymes [BR:
mpak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MIU77_04835
Messenger RNA biogenesis [BR:
mpak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MIU77_04835
Ribosome biogenesis [BR:
mpak03009
]
Prokaryotic type
rRNA helicases
MIU77_04835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
Motif
Other DBs
NCBI-ProteinID:
ULN53651
LinkDB
All DBs
Position
993127..994881
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AA seq
584 aa
AA seq
DB search
MTSPDSAESPAAEPTATEPSAASPPVPTFAELNLHPAVLQAVTDVGYESPSAIQEATIPA
LMAGSDVVGLAQTGTGKTAAFATPILSKIDTSAKTTQALVLAPTRELALQVAEAFSRYGA
HLSGLNVLPIYGGSSYGVQLAGLRRGAQVVVGTPGRVIDHLERGTLDLSRVDYLVLDEAD
EMLQMGFAEDVERILADTPEYRQVALFSATMPRAIRAITAKYLHDPVEVTVKAKTATAEN
ITQRYIQVSGPRKMDALTRVLEVEPFEAMIVFVRTKQATEEVAEKLRARGLAAAAINGDI
VQAQRERTIGALKDGTLDILVATDVAARGLDVERISHVLNYDIPQDTESYVHRIGRTGRA
GRSGAALLFVSPRERHLLKAIEKATRQKLTEAQLPTVEDVNAQRVSKFRDSITDTLAAPG
LDLFRSLIEDYERDHDVPLADIAAALALQSRNGDEFLMVEPPPEKRRERRDRKTERDSRT
GRHTGPRSGFATYRIAVGKRHKIGPGAIVGAIANEGGLQRSDFGHISIHPNFSLVELPAK
LPRKTFKALENTRISGVLINLQPDRAPGKSGRRDPAKPRRKPTE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccccgatagcgccgaatcgcccgccgccgagccgaccgcgacggagccgagc
gccgcgtcgccgcccgtgccgaccttcgccgaattgaacctgcaccccgcggtgctgcag
gcggtcaccgatgtcggctacgaatcgccgtcggcgatccaggaggcgacgatcccggcg
ttgatggccggctccgacgtggtcggtctggcccagaccggtaccggcaagaccgcggcg
ttcgccaccccgatcctgtccaagatcgacaccagcgccaagaccacccaggccctggtg
ctcgcccccacccgggaactggcgctgcaggtcgccgaggcgttcagtcgctacggtgcg
cacctgtccggcctcaacgtgctgccgatctacggcggctcctcctacggggtgcagttg
gcggggctgcggcgcggggcgcaggtggtggtcggcacgcccggacgcgtcatcgaccac
ctcgagcgcggcacgttggacctgtcccgggtggactatctggtgctcgacgaggccgac
gagatgctgcagatggggttcgccgaggacgtggaacgcatcctcgccgacaccccggaa
taccgccaggtcgcactgttctccgcgacgatgccgcgcgcgatccgcgccatcacggcg
aaatacctgcacgacccggtcgaggtcaccgtcaaggcgaagaccgcgaccgcggagaac
atcacccagcgctacatccaggtctcgggcccccgcaagatggacgcgctgacccgggtg
ctggaggtggagccgttcgaggcgatgatcgtgttcgtccgcaccaagcaggccaccgag
gaggtcgccgagaagttgcgggcccgcggcctggccgccgctgccatcaacggcgacatc
gtccaggcccagcgggaacgcacgatcggcgcgctcaaggacggcacactcgacatcctg
gtggccaccgacgtggccgcccgcggactcgatgtcgaacgcatctcccatgtgctcaat
tacgacatcccacaggacaccgagtcctacgtgcaccgcatcgggcgcaccggacgggcc
ggccggtcgggggccgcgctgctgttcgtctcgccgcgggaacgtcacttgctcaaggcg
atcgagaaggccacccgccagaagctcaccgaggcacaactgcccaccgtggaggacgtc
aacgcccaacgcgtttcgaagttccgggattccatcaccgacaccctcgccgcgccgggg
ctggatctgttccgcagcctgatcgaggactacgaacgcgaccacgacgttccgctggcc
gacatcgcggccgcgttggcgctgcagtcacgcaacggcgacgagtttttgatggtggag
ccgccaccggagaagcgccgcgagcgacgagatcggaaaaccgagcgggacagcagaacc
gggcgccacaccgggccgcgttccgggttcgccacctaccggatcgcggtcggcaagcgc
cacaagatcgggccgggcgcgatcgtcggcgccatcgccaacgaaggagggctgcagcgc
agcgacttcgggcacatcagcatccacccgaacttctcgctggtggagttgccggccaaa
ctgccgcggaagaccttcaaggcattggagaacacccgtatctccggggtgctgatcaat
ctgcagcccgaccgcgcgccggggaagtcgggtcgtcgcgacccggccaagccgcgccgg
aagcccaccgaatga
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