Mycolicibacillus parakoreensis: MIU77_05045
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Entry
MIU77_05045 CDS
T07959
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mpak
Mycolicibacillus parakoreensis
Pathway
mpak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIU77_05045 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpak03021
]
MIU77_05045 (rho)
03019 Messenger RNA biogenesis [BR:
mpak03019
]
MIU77_05045 (rho)
Transcription machinery [BR:
mpak03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MIU77_05045 (rho)
Messenger RNA biogenesis [BR:
mpak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MIU77_05045 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Fungal_virus_P2_C
VWA_2
PIP5K
Motif
Other DBs
NCBI-ProteinID:
ULN53684
UniProt:
A0ABY3U145
LinkDB
All DBs
Position
1039651..1041630
Genome browser
AA seq
659 aa
AA seq
DB search
MTDTDLITADDNGGADVSGTAGAAAQTDTKKDKRGGLSAMVLPELRVLAVQSGVKGASGM
RKSELIAAINESREGKNGGSHEAPATPAAQDSDTGDAPRRERRGAARDSGAPAADRGDAP
QTGGDTSGPAEPAATGGSDSAASQADTPPAQTKDRPKQARDAQGAGDGTDAKDAKDAKDG
PKDGPKDTKDGPKDGAKDGRGQNKNDKPRDKGDGAGGDSGQHGQQSQQSQQGQQGQQNRG
DDDGEGRGGRRGRRFRDRRRRDRSGDGGDTELREDDVVQPVAGILDVLDNYAFVRTSGYL
AGPNDVYVSMNMVRKNGLRRGDAITGAVRAPREGEGGGQNSRQKFNPLVRLDTVNGGPVE
DAKKRPEFGKLTPLYPNQRLRLETSPDLLTTRVIDLIMPIGKGQRALIVSPPKAGKTTIL
QDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIE
RAKRLVEQDKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIE
EGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKD
ELLLSPDEFGIVHKLRRVLSGLDSHQAIDLLMSQLRKTKNNYEFLVQVSKNTPGGLDND
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctgatcacagctgacgacaacggcggggccgacgtgtcgggcacc
gccggcgccgcggcacagaccgacaccaaaaaagacaagcgtggtgggctgtcggcgatg
gtgctgcccgagctacgggtgttggccgtgcaatccggcgtcaagggagcctccggtatg
cgaaaaagtgaactgatcgccgcgatcaacgagagccgtgaaggaaaaaacggcggatcg
cacgaggcgccggcgacgcccgcggcgcaagacagcgacaccggcgacgcgccccggcgc
gagcggcgcggtgccgcccgcgacagcggtgcaccggccgcggaccgcggtgacgcgccg
cagaccggcggcgacacgtccgggccggccgagcccgcggccaccggcggatcggacagc
gcagccagccaggccgatacgccccccgcgcagaccaaggaccgcccgaagcaggccaga
gacgcccagggcgccggtgacggcacggacgccaaggacgccaaagacgccaaggacggg
cccaaggacgggcccaaagacaccaaggacgggcccaaggacggcgccaaagacggtcgg
ggccagaacaagaacgacaaaccgcgcgacaagggcgacggcgccggcggggactcgggc
caacacggccaacagagtcaacagagtcagcagggtcagcagggtcaacagaaccgtggc
gacgacgacggtgagggccgcggcggtcggcggggccggcggttccgcgaccggcgccgc
cgggaccgttccggcgacggcggtgacaccgaactgcgcgaggacgatgtcgtgcagccg
gtggccggcatcctcgacgtgttggacaactacgcattcgtgcgcacctcgggctacctc
gccggacccaacgacgtgtacgtctcgatgaacatggtgcgcaagaacggcttgcgacgt
ggcgacgcgatcaccggcgcggtgcgcgccccacgggaaggcgaaggcggcggccagaac
tcccgacagaagttcaacccgctggtgcggttggacaccgtcaacgggggcccggtcgaa
gatgcgaagaagcgcccggagttcggcaagctcactccgctctaccccaaccagcggctc
cggctggagacctcgccggatctgctcaccacccgggtcatcgacctgatcatgccgatc
ggcaaggggcagcgggccttgatcgtgtcgccgcccaaggccggtaagaccacgatcctg
caggacatcgccaacgcgatcacccgcaacaaccccgagtgccacctcatggtcgtcctg
gtcgacgaacgccccgaagaggtgaccgacatgcagcgctcggtcaaaggtgaggtcatc
gcctccaccttcgaccgtccgccgtcggatcacacctcggtggccgagctggccatcgag
cgggccaaacgacttgtcgagcaggacaaggacgtcgtggtgcttctcgactcgatcacc
cgactcggccgcgcctacaacaacgcctcaccggcgtcggggcgcatcctctccgggggt
gtagactccacggccctgtacccgccgaaacggttcctcggcgcggcgcgcaacatcgag
gaaggcgggtcgttgacgatcatcgcgaccgcgatggtcgaaaccgggtcgaccggtgac
accgtgatcttcgaggagttcaagggcaccggtaacgcggagctgaagctggaccgcaag
atcgccgagcgccgggtgttccccgccgtcgacgtcaacccgtccggcacccgcaaggac
gagctgctgctctcgcccgacgagttcgggatcgtccacaagctgcgtcgggtgctgtcc
gggctggactcccaccaggcgatcgacctgttgatgagccagctgcgcaagaccaagaac
aactacgagttcctggtccaggtctccaagaacacgcccggcgggttggacaacgactga
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