KEGG   Mycolicibacillus parakoreensis: MIU77_14270
Entry
MIU77_14270       CDS       T07959                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mpak  Mycolicibacillus parakoreensis
Brite
KEGG Orthology (KO) [BR:mpak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpak03400]
    MIU77_14270
Enzymes [BR:mpak01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MIU77_14270
    5.6.2.6  RNA 3'-5' helicase
     MIU77_14270
DNA repair and recombination proteins [BR:mpak03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MIU77_14270
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr WH2_Lhr DEAD WH3_Lhr Helicase_C ResIII PhoH DUF6406 AAA_25
Other DBs
NCBI-ProteinID: ULN52024
LinkDB
Position
2989835..2994397
AA seq 1520 aa
MAGDRRDVLGRFTELTRDWFAGTFAAPTAAQEQAWSAIAEGHHTLVIAPTGSGKTLAAFL
WAIDRMAHAPAGTGTRVLYLSPLKALAVDVERNLRTPLAGMARVAERRGLAAPAISVGVR
SGDTPPAQRRRMLAAPPDILITTPESLFLMLTSSASTTLAGVQTVIVDEVHAVAGTKRGS
HLALSLERLDALGDRPAQRIGLSATVRPAEEVARFLCGSAPARIVAPPATKTFDLSVQVP
VPDMASPAGNTVWPEVEARVVDLIEAHRSTIVFANSRRLAERLTARINEIHAERAGVPVD
GMDRATNPRVAGGAPAQLMGSGQSHGAPPILARAHHGSVSKEARAAVEDDLKAGRLAAVV
ATSSLELGIDMGAVDLVIQIEAPPSVASGLQRIGRAGHQVGEVSTGVLIPKHRTDLIGCA
VAAERMRTGQIETLQVPSNPLDILAQHTVAAAALEPLDADSWFDTVRRSAPFATLPRSAF
EATLDLLSGKYPSTDFAELRPRVVYDRDTGTVTGRPGAQRLAVTSGGSIPDRGQFAVYLA
TGSEKSSRVGELDEEMVYESRPGDVIALGATSWRITEITHDRVLVVPAPGRPGRLPFWRG
DNAGRPAELGAALGRFTGELAALARTDFAARCTQLGFDGYAIENLWRLLEDQRAATAAVP
TDTTLVVERFRDELGDWRVVLHSPYGLRVHGPLALAVGRRLRERYGLDEKPTASDDGIVV
RLPDTLDEDATVAAVPGAELFVFDADEIEALVTAEVGGSALFASRFRECAARALLLPRRS
PGRRSPLWQQRQRAAQLLDVARNYPDFPIVLEAIRESLQDVYDVPALTALMAAVSQRRVQ
LTEVLTTAPSPFAASLLFGYVGAFLYEGDTPLAERRAAALALDPTLLAELLGRVELRELL
DAQVVATVDRQLQHVTPQRAARDAEAVVDLLRLLGPLTTAEVGERAAGGAVDDWLEELAA
AKRVLAVSYAGRRWWAVIEDIGRLRDGVGVAVPVGVPASFTEPVADPLGDLLARFARTRG
PFTTAQAAARFGLGLRVAADVLGRLAGDGRVVPGEFVESPTTVAGGDQWCDAEVLRILRR
RSLAALRAQVEPVTTAAYARFLPAWQQIHHTGGEAREALRAVLAQLAGVAIPASAVEPLV
LAQRVDGYSPALLDEVLASGEVLWSGAGPIAGSTPPADGWIMFHTAEAAPLTLAPPTALD
LTDAHRAVLDALAGGGAFFFRQLAGGPLPERTLKTALWELIWSGWVTGDTFAPIRAVLAG
AGTARSSTAHRRPRRPPRPARYAVAAPAPRAVDATVAGRWSALPAPEPDPTLRAHHRAEL
LLHRYGVLTKGAVAAEAVPGGFAGLYPVLSGFEQAGRCQRGYFVESLGAAQFAVAATVDR
LRAYLEDPDPQRRPYAAVLLAAADPANPYGAALPWPASPQSAAGARPGRKAGALVVLVDG
ELVLFVERGGRSMLTFDDDDQVLRTAATALAEAVTAGRVDGLAVERVDSTSVLGAREAPI
VAALRDAGFARTPRGLRLRR
NT seq 4563 nt   +upstreamnt  +downstreamnt
gtggccggtgatcgtcgtgacgtcctgggccggttcaccgaactgacccgggactggttc
gcgggcaccttcgccgcccccaccgcggcacaggaacaggcgtggtcggcgatcgccgag
ggccatcacacgctggtgatcgccccgaccggttcgggcaagaccctggcggcatttctg
tgggcgatcgaccggatggcgcacgcccccgccggcaccggcacccgggtgctctacctc
tccccgctcaaggcgctggcggtcgacgtcgaacgcaacctgcgcaccccgctggccggg
atggcccgcgtcgccgaacgccgtggtctggccgccccggcgatcagtgtcggggtgcgc
tccggggacaccccgccggcgcagcgccgccggatgctggccgccccgcccgacattttg
atcaccaccccggagtcgctgtttttgatgctgacgtcctcggcgagcaccaccctggcc
ggggtgcagaccgtgatcgtcgacgaggtgcacgccgtggccggcaccaaacgcggcagc
cacctggcgctgtcgttggagcgcctcgacgcgctgggcgaccgcccggcccaacgcatc
gggttgtcggccaccgtccgccccgccgaggaggtggcgcggtttctctgcgggtcggca
ccggcgcggatcgtcgcgcccccggcgaccaaaaccttcgatctcagcgtccaggtgccg
gtaccggacatggccagcccggccggcaacaccgtctggccggaggtggaggcccgcgtc
gtcgacctgatcgaggcgcaccgctccacgatcgtgttcgccaactcgcggcgcctggcc
gaacgactcaccgccagaatcaacgaaatccacgccgagcgcgccggtgtgcccgtcgac
ggcatggaccgggcgaccaatccgcgggtggccgggggcgccccggcccagctgatgggc
agcggacagagccacggcgcaccaccgatcctggcacgcgcccatcacggctcggtcagc
aaagaggcccgcgctgccgtcgaggacgatctcaaggcgggccggttggcggcggtggtc
gccacctccagcctcgaactcggcatcgacatgggcgcggtggacctggtcatccagatc
gaggcgcccccgtcggtggccagcggactgcaacgcatcggtcgggccggccaccaggtg
ggcgaggtgtcgacgggggtgctcatccccaaacatcgcaccgacctgatcgggtgtgcg
gtggccgccgagcggatgcgcaccgggcagatcgagacgcttcaggtgccgagcaacccg
ctggacatcctggcgcagcacacggtggccgccgccgcgctggagcccctggacgccgac
agctggttcgacaccgtccggcgctccgcgccgttcgccacgttgccgcgcagcgctttc
gaggccaccctggatctgctgtcgggtaaatacccgtccaccgatttcgccgagctgcgc
ccacgcgtggtctatgaccgcgacaccgggacggtgaccggacgtcccggcgcccagcgg
ttggcggtcacctccggcggttcgatccccgaccgcggccagttcgccgtgtatttggcg
accggtagcgaaaaatcctcgcgggtcggcgaactcgatgaggagatggtgtacgagtcg
cggcccggcgacgtgatcgcgttgggggcgacgagttggcggatcaccgagatcacccac
gaccgggtgctggtggtccccgcccccgggcggccgggccggttgccgttctggcgcggc
gacaacgccggccggccggccgaactcggggccgcactgggcagattcaccggcgagttg
gccgcactggcgcgcaccgatttcgcggcgcggtgcacgcaactgggtttcgacggctac
gcgatcgagaatctgtggcggctgttggaggatcaacgcgccgccaccgcggcggtgccc
accgacaccaccctggtggtggagcggttccgcgatgaactcggcgactggcgggtggtg
ctgcattctccgtacggcctgcgggtgcacggcccgctggccctggcggtgggccgccgg
ctgcgcgagcggtacggcctcgacgagaagcccaccgcctccgatgacggcatcgtggtg
cgcctgcccgacaccctcgacgaggacgccaccgtcgccgcggttccgggcgcggagttg
ttcgtcttcgacgccgacgagatcgaggcgctcgtcaccgccgaggtcggcgggtcggcg
ttgttcgcctcccgtttccgagagtgcgcggcgcgcgccctgctgttgccgcgccggagc
cccgggcgccgctccccactgtggcagcagcgtcaacgggccgcacagttgctcgacgtc
gcccgcaactacccggatttcccgatcgtgctcgaagcgatccgcgagtcgctgcaagac
gtctacgacgtgccggcgttgaccgccctgatggcggcggtctctcaacgccgggtgcag
ctgaccgaggtgttgaccaccgcgccgtcaccgttcgccgcgtccctgctcttcggttac
gtcggtgcgttcctctacgagggcgacaccccgctggccgagcgtcgcgccgccgccctg
gcgctggatccgacccttctcgccgagttgctggggcgggtggagttgcgcgagctgctc
gacgcgcaggtggtggccaccgtcgaccggcaactgcaacatgtgaccccgcagcgggcc
gcgcgcgacgccgaagccgtcgtcgatttgctgcgtctgctcggtccgctgaccaccgcc
gaggtcggcgagcgcgccgccggcggcgccgtcgacgactggctcgaggagctggcggcg
gccaaacgggtgctcgcggtgtcctacgccggccggcggtggtgggcggtgatcgaagac
atcggccgcttgcgcgacggcgtcggcgtggccgtgccggtcggggtcccggccagcttc
accgaaccggtcgccgacccgctgggcgacctgctggcacgcttcgcccggacccgcgga
ccgttcaccaccgcgcaggcggccgcacgcttcgggttggggctgcgggtggccgccgat
gtgctcggtcggctggccggcgacgggcgggtggtgcccggcgagttcgtcgaatcgccc
accaccgtcgccggcggtgaccagtggtgcgacgccgaggtgctgcgcattctgcggcgc
cgctcgctggcggcgctgcgcgctcaggtcgaaccggtcaccaccgccgcctacgcccgg
ttcctgccggcctggcagcagatccaccacaccgggggcgaggcgagggaggcactgaga
gccgtgctcgcccagctggcgggggtagcgataccggcctcggcggtcgagccgctggtg
ttggcccagcgggttgacggctactccccggcgctgctggacgaggtgctggcctccggg
gaggtgctgtggtcgggagccggcccgatcgccgggagcacaccgccggccgacggctgg
atcatgttccacaccgccgaggcggctccgctgacgctggcgccgcccaccgcgctggac
ctcaccgacgcccaccgggccgtgctcgacgccctcgccggcggcggcgcgttcttcttc
cgtcaactcgccggcgggccgcttcccgagcgcaccctcaaaaccgcgctgtgggagctg
atctggtccggttgggtcaccggtgacaccttcgccccgatccgggcggtgctggccgga
gccgggactgcgcgctcctcgaccgcgcatcgccggccgcgtcgaccgccccggccggcc
cgctacgccgtggccgcacccgcaccccgggccgtggacgcgacggtggccgggcggtgg
tcggcgctgccggcgcccgaaccggaccccaccctgcgcgcccatcaccgcgccgaactg
ctgctgcaccgctacggcgtgctcaccaagggcgcggtggccgccgaggcggtgccgggc
ggattcgccgggctgtatccggtgctgagcggttttgaacaggcgggccgctgccagcgc
gggtatttcgtcgagtcgctgggcgcggcacagttcgccgtcgccgccacggtggaccgg
ctgcgggcctacctcgaggatcccgacccgcagcgacgcccctacgcggcggtgctgctc
gccgcggcggacccggccaatccctacggcgcggcgctgccctggccggcgagcccgcaa
tcggcggcgggggcgcggcccggccgcaaggccggagcgctggtggtgctcgtcgacggc
gaactggtgctgttcgtggagcgcggcggccggtcgatgctcaccttcgacgacgacgat
caggtcctgcgcaccgcggcgacggcgctggccgaggcggtcaccgccggccgcgtcgac
gggctggcggtggagcgggtggactccacgtcggtgctgggcgcgcgtgaggcgccgatc
gtggccgcgctgcgcgacgccgggttcgcccgcacgccccgcggtctgcggctgcgccgc
tga

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