Microbacterium paludicola: BO218_00150
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Entry
BO218_00150 CDS
T04601
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpal
Microbacterium paludicola
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpal03032
]
BO218_00150
03400 DNA repair and recombination proteins [BR:
mpal03400
]
BO218_00150
Enzymes [BR:
mpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BO218_00150
DNA replication proteins [BR:
mpal03032
]
Prokaryotic type
DNA Topoisomerases
BO218_00150
DNA repair and recombination proteins [BR:
mpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BO218_00150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
DUF7589
Motif
Other DBs
NCBI-ProteinID:
APF35546
LinkDB
All DBs
Position
31241..33901
Genome browser
AA seq
886 aa
AA seq
DB search
MKSIQGYLGDEYEVLSSVGHIRDLAKKEDIPADKKQAYGKYSIDVENGFDAYYVVSDRKT
KTVAELKRALKDADEVLLATDEDREGEAIAWHLLEVLKPKVPVKRMVFHEITKDAIRAAA
DNTRELDLALVNAQETRRVLDRLYGWDVSPVLWRKIGSGRDGQALSAGRVQSAATRMVVE
RERERMSFVSASYWDIEAHAAKDGGSFSTRLARLDGAPLARGTDFDDAGALKKAVVVLSE
KDARELATAIEKAATAAVTAVEAKPGTRSPKPPFTTSTMQQEAGRKLSMSAKHAMSVAQR
LYEKGYITYMRTDSTALSAQAVTAARTQAVALYGDRAVPASPRSYRNNAKNAQEAHEAIR
PSGEEFRTPASVASGLDRDEQRLYDLIWKRTVASQMSDAKYETTTVTLEVDAGGKRAAFT
ASGTVYTFKGFLEAYEEGNDEKRGDNDRSADQSLPPVAVGDELALSDVEPKGHATSPKPR
YTEASLVKALEEKGIGRPSTFASIIDVILERGYVTKRGQALVPSWLSFSVVRLLEQHFSD
LVDYDFTAALEDDLDAIARGEQAREAWLKEFYFGSDNHVGLRNIVENLGDIDARELNATP
IGDVATLRFGKYGPYLDVPVGDGETRIVNVPDDLAPDELTPEKAQELIDAPVAGDRVLGE
NPENGKLIVVKDGRFGPYVQELEPEPEETVDEATGEVAPAKKKTTKKKEAAPKPRTASLF
KSMSVDTVDLEQALKLLSLPRVVGVDPESGNEITAQNGRYGPYLKKGTDSRTLASEQQLF
DITLEEALAVYAQPKYGARAASSALKEFEADPTSGKPIKLKDGRFGPYVTDGETNATIPR
GENAEEVTFERAVQLLADKRAKGPAPKRKTAARKTTTTRKPAAKKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgatccagggctacctgggcgacgagtacgaagtgctcagctcggtcgggcac
atccgggatctcgctaagaaagaggacatcccggccgacaagaagcaggcgtacggcaag
tactccatcgacgtcgagaacggcttcgatgcgtattacgtggtcagcgatcgcaagacc
aagaccgttgccgagctcaagcgcgccctgaaggacgccgacgaagtcctgctcgccacc
gatgaagaccgcgagggcgaggcgatcgcctggcacctgctcgaggtgctcaagcccaag
gtccccgtcaagcgcatggtcttccacgagatcaccaaggatgccatccgcgcggccgcc
gacaacacccgcgagctcgacctcgcgctcgtcaacgcgcaggagacccgccgcgtcctc
gaccggctctacgggtgggatgtctcgcccgtgctctggcgcaagatcggttccggccgc
gacggtcaggcgctgagcgccggccgcgtgcagtccgccgcgacccgcatggtcgtcgag
cgtgagcgcgagcggatgtcgttcgtctcggcgtcgtactgggacatcgaggcccacgcg
gcgaaggacggcggctcgttctcgacgcgcctggcgcggctcgacggtgctccgctggcc
cgcggcaccgacttcgacgacgccggcgcgctgaagaaggcggtcgtcgtcctcagcgag
aaggacgcccgcgagctcgcgaccgcgatcgagaaggcggccactgcagccgtcaccgcg
gtcgaggccaagcccggaacccgcagccccaagcctccgttcacgacctccacgatgcag
caggaggccggccgcaagctctcgatgagcgccaagcacgcgatgagcgtcgcccagcgt
ctctacgagaagggctacatcacctatatgcgcaccgactcgactgcgctctcggcgcag
gccgtgacggcggcgcgcacgcaggcggtcgcgctctatggcgaccgcgcggttcccgcc
agcccgcgctcgtaccgcaacaacgccaagaacgcccaggaggcccacgaggcgatccgc
ccctcgggcgaggagttccgcacgcccgcatccgtcgcctccggtctcgaccgcgacgag
cagcgcctgtacgacctcatctggaagcgcaccgtcgccagccagatgtcggacgcgaag
tacgagaccacgaccgtcacgctcgaggtcgatgccggcggcaagcgcgcagcgttcacg
gcatccggcaccgtctacaccttcaagggcttcctcgaggcgtacgaagagggcaacgac
gagaagcgcggcgacaacgaccgctccgcagaccagtcgctgccacccgtcgccgtgggc
gacgaactcgcgctgtcggatgtcgagcccaagggccacgcgacgagcccgaagccccgc
tacaccgaggcgagcctcgtcaaggcgctcgaggagaagggcatcggtcgtccgtcgacc
ttcgcgagcatcatcgacgtcatcctcgagcgcggctacgtcaccaagcgggggcaggcg
ctcgtgcccagctggctctcgttcagtgtcgtccggctgctcgagcagcacttctccgac
ctcgtcgactacgacttcacggccgcgctcgaggacgacctcgacgccatcgcccggggc
gagcaggcgcgcgaggcgtggcttaaggagttctacttcggctccgacaaccacgtgggc
ctgcgcaacatcgtcgagaacctcggcgacatcgacgcccgcgagctgaacgcgacgccc
atcggcgacgtcgcgacgctgcggttcggcaaatacggcccgtacctcgatgttccggtc
ggtgacggcgagacgcgcatcgtcaacgtgcccgacgacctcgcgcccgacgagctgacg
cccgagaaggcgcaggaactcatcgacgctcctgtcgccggcgaccgcgttctcggcgag
aaccccgagaacggcaagctcatcgtcgtcaaggacggacgcttcggtccctacgtgcag
gagctcgagcccgagcccgaggagaccgtcgacgaggcgaccggcgaggtcgcccccgcc
aagaagaagacgaccaagaagaaggaagcggctcccaagccgcgcaccgcgtcgctgttc
aagtcgatgagcgtcgacacggtcgacctcgagcaggcgctcaagctgctgtcgcttccc
cgcgtcgtgggcgtcgaccccgagtcgggcaacgagatcacggcccagaacggccgctac
ggtccgtacctgaagaagggcaccgactcgcgcaccctcgcgagcgagcagcagctgttc
gacatcacgctcgaggaggccctcgccgtctacgcgcagcccaagtacggggctcgcgcc
gcatcgagcgcgctcaaggagttcgaggccgaccccaccagcggcaagccgatcaagctg
aaggacggccgcttcgggccctatgtcaccgacggtgagaccaacgcgacgatcccgcgc
ggtgagaacgccgaagaggtcacgttcgaacgcgccgttcagctgctcgccgacaagcgc
gccaagggccccgcgcccaagcgcaagacggcggcacgcaagaccacgacgacgcgcaag
cccgcggcaaagaagaagtga
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