Microbacterium paludicola: BO218_00865
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Entry
BO218_00865 CDS
T04601
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mpal
Microbacterium paludicola
Pathway
mpal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BO218_00865
09124 Replication and repair
03420 Nucleotide excision repair
BO218_00865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpal03021
]
BO218_00865
03400 DNA repair and recombination proteins [BR:
mpal03400
]
BO218_00865
Enzymes [BR:
mpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BO218_00865
Transcription machinery [BR:
mpal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BO218_00865
DNA repair and recombination proteins [BR:
mpal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BO218_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_3
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
APF32926
LinkDB
All DBs
Position
complement(169972..171615)
Genome browser
AA seq
547 aa
AA seq
DB search
MADGPLIVQSDRTVLLEVAHPSAEDARHELAIFAELERAPEHIHTYRITRLGLWNARAAG
HDADDMLATLDRWSRFPVPPSVSTDIRETVTRYGRLVIERDDEGTLVLRSNDAAVLAEVT
RNKRIQPLLLGHPTPETYVIDAWARGQIKQELLKIGWPAEDLAGFTPGTPHEIELHEDGW
SLRPYQRKAVDIFTEGGSGVVVLPCGAGKTLVGAAAMADTKTTTLILVTNTVSARQWRNE
LLKRTSLTPEEIGEYSGQSKEVKPVTIATYQILTAKRKGEYAHLALLDALDWGLVVYDEV
HLLPAPVFKLTADLQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISP
AVCYEVRVDLPASDRLEYAASADDERYRLAATAHAKIGVVRDLVAKHAGEQILVIGQYLD
QIDVLSDALGAPKITGSTPVDEREELYEAFRTGEIPVLIVSKVANFSIDLPDASVAIQVS
GSFGSRQEEAQRLGRLLRPKSNGHTASFYTLIARDTVDQDFAQNRQRFLAEQGYSYTILD
AEKLEAA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggccccctgatcgtccagagcgaccgcaccgtgctgctggaggtcgcccac
ccgagcgcggaggacgcgcggcacgagctcgcgatcttcgccgaactcgaacgcgccccg
gaacacatccacacctaccgcatcacgcggctgggcctgtggaacgcccgcgccgcgggg
cacgacgccgacgacatgctcgcgacgctcgatcggtggtcgcgcttcccggtgccgccg
tcggtgtcgaccgacatccgcgagacggtcacccggtacggacgcctcgtcatcgaacgc
gacgacgagggcacgctcgtgctgcgttcgaacgacgcggccgtgctggccgaggtcacc
cgcaacaagcggatccagcccctgctgctggggcaccccacgcccgagacgtacgtcatc
gacgcctgggcccgcggccagatcaagcaggagctgctgaagatcggctggccggcggag
gacctcgccggcttcacccccggcacaccccacgagatcgagctgcacgaagacggctgg
agcctgcgcccctaccagcgcaaggcggtcgacatcttcaccgagggcggctcgggtgtg
gtggtgctcccctgcggcgcgggcaagacgctcgtcggggccgcggcgatggccgacacg
aagaccaccacgctcatcctcgtgaccaacaccgtcagcgcgcggcagtggcgcaacgag
ctgctcaagcgcacgagcctgacgccggaggagatcggcgagtactccggtcagtcgaaa
gaggtcaagccggtcacgatcgcgacctaccagatcctcaccgcgaagcggaagggcgag
tacgcccacctcgcgctcctcgatgcgctcgactggggtctcgtcgtgtacgacgaggtg
cacctccttcccgcgccggtgttcaagctgaccgccgatctgcaagcgcgacgccgcctc
ggcctcaccgccaccctcgtgcgtgaggacggccgcgagggtgatgtgttcagcctcatc
ggccccaagcgcttcgacgccccctggaaggagatcgaggcccagggcttcatctccccc
gcggtctgctacgaagtgcgcgtcgacctcccggcgtccgatcgcctcgagtacgccgcg
tcggccgacgacgagcggtaccgcctggcggccaccgcccacgcgaagatcggcgtcgtc
cgcgacctcgtcgcgaagcacgcgggcgagcagatcctcgtcatcgggcagtacctcgat
cagatcgacgtgctctccgacgcgctcggggcaccgaagatcacggggtcgacacccgtc
gacgagcgcgaggagctgtacgaggcgttccgcacgggagagatccccgtgctcatcgtc
tcgaaggtcgcgaacttctcgatcgacctgcccgacgcctctgtcgcgatccaggtctcg
gggtcgttcggatcccgccaagaggaggcccagcggctcggacgcctgcttcgtccgaag
tccaacggtcacaccgcgagcttctacacgctcatcgctcgcgacaccgtcgaccaggac
ttcgcgcagaaccggcagcgcttcctcgccgagcaggggtacagctacacgatcctcgac
gccgagaagctcgaagcggcctga
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