Microbacterium paludicola: BO218_02420
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Entry
BO218_02420 CDS
T04601
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpal
Microbacterium paludicola
Pathway
mpal03420
Nucleotide excision repair
mpal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BO218_02420
03430 Mismatch repair
BO218_02420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpal03400
]
BO218_02420
Enzymes [BR:
mpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BO218_02420
DNA repair and recombination proteins [BR:
mpal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BO218_02420
MMR (mismatch excision repair)
Other MMR factors
BO218_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APF33193
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Position
511931..513685
Genome browser
AA seq
584 aa
AA seq
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MTDPLAGLDEQQREAASALRGPVCVLAGAGSGKTRVITHRIAHGVETGAYSPNRVMAVTF
TAKAAGEMRGRLRALGVGGVAARTFHSAALAQLNYFWPQLAGDAAPTILGSKVRLLAQAA
DAIGLDPDPAVLRDVATRIEWRKITMRSIERYALDRPEPVGSLSLDAVVALQRSYEQVKD
ERRQLDFEDVLLACAGMLEAEPRVVAEVREQYRHFTVDEFQDVSPVQHRLLELWLGERRD
LCVVGDASQTIYSFAGADPSYLLEFGTRHPDARILRLERNYRSEAGVVAVANALMRGRPG
ALELTADRATPDHPRPTIRAFADDTAEADGVAEAVAEQLARGIDPRHIAVLYRVNAQSAP
LLAALARRGIAAAVLGGARFFDIPEVRQAVMALRGASVAPSSGDLVADVRSILRSLGLSD
EPPPAGGPLRDAWEARAALLRLAEEAPAGTTMRAFTDELQVRAKDQHEIATRTVTLSTLH
AAKGLEWDHVHLVGLAEGLLPIAYATTFEQIDEERRLAYVGVTRAARTLTLSWARTSGRY
ERQVSRFVREIGTSTLDEIRGRATSARRTTPAASSTGSAPSPAR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcctctcgccggactcgacgagcagcagcgcgaggcggcctctgcgctgcgc
ggtcccgtgtgcgtgctcgcgggtgccgggtcggggaagactcgcgtcatcacccaccgc
atcgcgcacggcgtcgagaccggcgcgtactcgccgaaccgggtcatggcggtcaccttc
acggcgaaagccgcgggggagatgcggggtcgactgcgcgccctgggcgtcggcggcgtc
gccgcgcgcacgttccactccgcggctctggcacagctgaactacttctggccgcagctc
gccggcgacgctgcgccgacgatcctgggaagcaaggtgcggctgctcgcgcaggcggcc
gacgcgatcgggctggaccccgatccggccgtcctgcgcgatgtcgcgacgcgtatcgag
tggcgaaagatcacgatgcgttccatcgagcgatacgccctcgacaggcccgaaccggtc
ggctcgctctcgctcgacgcggtggtcgcgctgcagcgctcgtacgagcaggtgaaggac
gagcggcggcagctcgacttcgaggacgtgctgctcgcgtgcgcggggatgctcgaggcc
gagccgcgcgtcgtcgctgaagtgcgcgagcagtaccgccacttcaccgtggacgagttc
caggacgtctcgcccgtgcagcaccgcctgctcgagctctggctgggcgaacgccgtgat
ctctgcgtcgtcggtgacgccagccagacgatctattccttcgcgggcgccgacccgtcg
tacctgctggaattcggcacccggcatccggatgcgcggattctgcggctcgaacgcaac
taccgctccgaggcgggcgtcgtcgccgtggcgaacgctctcatgcggggccgccccggg
gctctcgagctcacggccgatcgcgcgacccccgatcatccgcgcccgacgatccgtgca
ttcgccgatgacaccgccgaagcggacggcgtggccgaagcggtcgcagagcagctcgcg
cgggggatcgatccccgccacatcgccgtcttgtatcgggtgaacgcccagtcggcgccg
ctcctggcggcgctggcgcggcgcggcatcgccgccgcggtgctcggaggcgcacgcttc
ttcgacatccccgaggtgcgccaggccgtgatggccctgcgcggcgcgtccgtggccccc
tcgtccggcgacctcgtcgccgatgtccggtcgatcctgcgctcgctcggtctgagcgac
gagccgcccccggcgggcggtccgctccgtgacgcctgggaggcgcgcgcggcgctgctc
cgcctcgccgaggaggcgccggcgggtaccacgatgcgggcgttcaccgatgagctgcag
gtgcgggcgaaggatcagcacgagatcgccacgcggaccgtgacgctgtcgacccttcac
gccgcgaagggcctcgagtgggatcacgtccacctcgtgggccttgcggagggactgctg
cccatcgcctacgccacgacgttcgagcagatcgacgaggagcgccgactggcctacgtg
ggtgtcacgcgagctgctcgaacgttgacgctgtcgtgggctcggacctcggggcgctac
gaacggcaggtgtctcgcttcgtccgggagatcggcaccagcacgctggatgagattcgt
ggtcgtgccacgtcggctcgccgaacgacgcccgcagcgtcatcgaccgggtccgctccg
tcaccggcgcgctga
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