KEGG   Microbacterium paludicola: BO218_02620
Entry
BO218_02620       CDS       T04601                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mpal  Microbacterium paludicola
Pathway
mpal03030  DNA replication
mpal03410  Base excision repair
mpal03420  Nucleotide excision repair
mpal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BO218_02620
   03410 Base excision repair
    BO218_02620
   03420 Nucleotide excision repair
    BO218_02620
   03440 Homologous recombination
    BO218_02620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpal03032]
    BO218_02620
   03400 DNA repair and recombination proteins [BR:mpal03400]
    BO218_02620
Enzymes [BR:mpal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BO218_02620
DNA replication proteins [BR:mpal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BO218_02620
DNA repair and recombination proteins [BR:mpal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BO218_02620
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BO218_02620
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_2 HHH_5
Other DBs
NCBI-ProteinID: APF33230
LinkDB
Position
558852..561491
AA seq 879 aa
MTDSPKPTLLVVDGHSLAYRAFFALPVDNFTTKDGQHTNGIYGFLSMFVNLIKAEKPTHL
AVAFDTSRQSFRTREYTEYKANRSESPAEFKGQIPLLQECLAAMNVTVLTKEDYEADDIL
ATLATQGAAEGFDVLVCSGDRDTIQLVTDDVTLLYPSVQGVSQLKRYTPETVVEKYGLPP
QNYPDIAALVGETSDNLPGVPKVGEKTAVKWLTQWGSLDALLENADKIGGVVGGNLREHL
DDVRRNRSLNRLLRDVELGVTPADLAVGPIDAEAVRDIFARLEFRTLLPRVFEAAGADPA
MAVETAAPAVPAPTAAELSAADIGAWAAARTGDVGVTVVVAGGFPQRIGLADADEAVEAT
WSDDVAEALRPWLESDAPKVLSDAKLQVKALRRGGVRLGGLVFDPILAGWLLRPSFPDKT
LADLVHRYLDEKLPEADPTQLVPETEGATPGQLSWFALRVAEAVRTEMPASVLSVLTGIE
LPTLDALADMELAGVAVSHEKLSTFSAELAARADDIAQRAYATIEREVNLGSPKQLQEVL
FEQLQLPKTRKTKTGYSTDAAVLADLQESNPHPFLELLLQHREATKLRQIIESLDTAIAA
DDRIHTTYVQTGSQTGRLSSTDPNLQNIPIRNEESRRIRAAFEVGEGYETLLTADYSQIE
MRIMAHLSEDPGLIEAFVSGEDLHRFVGARVFGVEPADVTPAMRTKVKAMSYGLVYGLSA
FGLSKQLRIEQSEAKQLMLEYFARFGAVRDYLRSSVEQARIDGYTETIFGRRRPFPDLAS
PNRVLRENAERAALNAPIQGSAADIMKIALFRIAREFQAEGLRSRVLLQIHDELVVEVAP
GEWDAAERIVRDRMGDAAELTVPLDVQIGRGGDWDVAGH
NT seq 2640 nt   +upstreamnt  +downstreamnt
gtgacggactcgccaaagcctacccttctcgtcgtcgacggccattcgctggcctaccgc
gcgttcttcgcgctgccggtcgacaacttcaccacgaaggacggccagcacaccaacggc
atctacggcttcctgtcgatgttcgtcaacctgatcaaggcggagaagccgacgcacctg
gccgtcgcttttgacacctcccggcagtcgttccgcacccgcgagtacacggagtacaaa
gcgaaccgatccgagtcgcccgccgagttcaaggggcagatcccgctgctgcaggagtgc
ctcgccgccatgaacgtgacggtgctgacgaaggaggactacgaggccgacgacatcctc
gccaccctcgcgacgcagggcgccgcagagggcttcgacgtcctcgtctgctcgggcgac
agagacaccatccagctcgtcaccgacgacgtgaccctgctctacccgagtgtccagggt
gtgtctcagctcaagcgctacacccctgagacagtggtcgagaagtacgggctgccgccg
cagaactatcccgacatcgccgctctcgtgggcgagacgagcgacaaccttcccggggtg
ccgaaggtcggcgagaagaccgcggtgaagtggctcacgcagtggggatctctcgacgcg
ctgctggagaacgccgacaagatcggcggtgtcgtgggaggcaacctgcgcgagcacctc
gacgacgttcggcgcaatcgttcgctgaaccgcctgctgcgcgacgtcgagctcggagtc
acgcccgcagacctcgcggtcggaccgatcgacgccgaggctgtgcgcgacatcttcgcc
cggctcgagttccgtacgctgctcccgcgcgtcttcgaggcggcgggggccgatcccgcg
atggccgtcgagaccgccgccccggccgttccggcgccgaccgccgccgagctctccgcc
gccgacatcggcgcctgggccgcggcccgcaccggtgacgtcggcgtcaccgtcgtggtc
gccggtggcttcccgcagcgcatcggcctggccgatgccgacgaagcggtcgaggccacg
tggagcgacgacgtcgccgaggccttgcgcccgtggctcgagtccgacgcgccgaaggtg
ctctccgacgcgaagctgcaggtcaaggcgcttcggcgtggcggggtgcgcctgggcggt
ctcgtcttcgatccgatcctggcgggatggctcctccggccgagctttcccgacaagacc
ctcgccgacctcgtacaccggtatctcgacgagaaactgcccgaagccgacccgacccag
ctcgttcccgagaccgagggcgcgacgccgggccagctgtcgtggttcgcactgcgcgtc
gcagaggcggtgcgcacggagatgcccgcttcggtgctgtcggtgctcaccggcatcgag
ctgcccacgctcgacgccctcgccgatatggagctcgccggcgtcgcggtctcgcacgag
aagctctccaccttctccgccgagctcgcagcgcgcgctgacgacatcgcgcagcgtgcc
tacgcgacgatcgagcgcgaggtcaacctcggttctcccaagcagctgcaggaggtgctg
ttcgagcagctccagctgccgaagacccgcaagacgaagacgggctactccacggatgcc
gccgtactggcagacctgcaggaatcgaacccccaccccttcctcgagctgctcctccag
caccgggaggccacgaagctgcgccagatcatcgagtcgctcgacaccgcgatcgccgca
gacgaccgcatccacacgacctacgtgcagacgggaagccagaccgggcggctctcaagc
accgatcccaacctgcagaacatcccgatccgcaacgaagagagccggcgcatccgtgcc
gcgttcgaggtcggcgagggatacgagaccctgctgaccgccgactactcgcagatcgag
atgcgcatcatggcgcacctctccgaagacccggggctcatcgaggccttcgtgtcgggc
gaagatctccaccgcttcgtcggcgcgcgcgtcttcggcgtcgagccggccgacgtgaca
ccggccatgcgcacgaaggtcaaagccatgtcgtacgggctcgtctacgggctgtcggcg
ttcggtctctcgaaacagctgcgcatcgagcagtccgaggccaagcagttgatgctcgag
tacttcgcccgtttcggggcggtgcgcgactacctgcgctcgagcgtcgagcaggcccgc
atcgacggttacacggagacgatcttcggccggcgccgtccgttccccgacctcgcgagc
ccgaaccgggtcctgcgcgagaacgcggagcgtgcggctctcaacgctccgatccagggc
agcgccgccgacatcatgaagatcgcgctgttccgcatcgctcgcgagttccaggccgaa
gggctccgatcccgcgtgctgctgcagattcacgacgagctcgtcgtcgaggtcgcgccg
ggggagtgggatgctgccgagcgcatcgtccgcgaccgcatgggcgacgccgccgaactg
accgtccctctcgacgtgcagatcggtcgcggcggcgactgggacgtcgccggtcactga

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