Microbacterium paludicola: BO218_02725
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Entry
BO218_02725 CDS
T04601
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mpal
Microbacterium paludicola
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpal03019
]
BO218_02725
Enzymes [BR:
mpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BO218_02725
Messenger RNA biogenesis [BR:
mpal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BO218_02725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
MTR4_beta-barrel
AAA_22
DUF848
Motif
Other DBs
NCBI-ProteinID:
APF33250
UniProt:
A0ABU1HXS0
LinkDB
All DBs
Position
complement(582164..584638)
Genome browser
AA seq
824 aa
AA seq
DB search
MSDSSPAERFLAAQSARAHPLTTAFAGMQRFDLDPFQVAGCHALEDGRSVLVAAPTGAGK
TIVGEFAMHLAMLEPGTKAFYTTPMKALSNQKFRELVDVYGEDEVGLLTGDTNINGSARI
VVMTTEVLRNMLYADSPALRGLRYVVMDEVHYLADRFRGAVWEEVIIHLHPSVRMVALSA
TVSNAEEFGDWLDTVRGDTAVVVSEIRPVPLEQHVLVRGDLLPLFDDRAGVATAQVNREL
TRLRSPQGQRYENNRRAHAHRSGGGREAHRKHRGGTAPARPSALQRLERIDRPAVVELLG
RSNLLPAIFFIFSRAGCDGAVQQVRRSGLRLTTAEERDEIRAIVDRRTRALAQEDLAVLG
FWEWRDNLERGVAAHHAGLLPAFKEVVEELFQRKLVKAVFATETLALGINMPARTVVLEK
LEKFNGEARVAITSGEYTQLTGRAGRRGIDVEGHAVIQWSDGLDPQAVAALASRRTYPLN
SSFRPTYNMAVNLIDRFGRDRAREILESSFAQFQADRSVVGLARQVKEKEQTLDGYARSM
TCDRGDFAEYSGIRRELSDLEKLNRNDRTAPARIRQRRQDELAGLRKRMQRHPCHDCPDR
EHHARWAERYWRLRRDVQKLRQQIDTRTGTVARVFDRVVDVLTALDYVTVGADGTTVLTS
AGSTMRRIYGERDLLVAEALRRGLWRDLDPAGLAALACSLVYEPRRESDGPGEYGLPRGA
FRTALAETQELWAVLDDLEQDHRLPGTEPVATGLAKAMHSWARGVMLDRVLLEADMAAGD
FVRWAKQTIDLLDQLSLVADPDLARTARAALDAVRRGIVAYSGV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgactccagtcccgccgagcgcttcctggcggcgcagtctgcgcgggcgcatccg
ctgaccaccgccttcgcgggcatgcagcgcttcgacctcgaccccttccaggtcgccgga
tgccacgccctcgaggacggcaggagcgtgctcgtcgccgccccgacgggcgccggcaag
acgatcgtgggcgagttcgccatgcacctcgcgatgctcgagcccggcaccaaggcgttc
tacacgacccctatgaaggctctgtcgaaccagaagttccgcgagctggtggacgtctac
ggtgaggacgaggtcggcctcctcaccggcgacaccaacatcaacggcagcgctcgcatc
gtggtcatgaccacggaggtgctccggaacatgctctacgccgactcgccggccctgcgc
ggcctccgttacgtcgtcatggacgaggtccactatctcgccgatcgcttccgcggggcc
gtgtgggaggaggtcatcatccacctccacccgtcggtacggatggtggcgctctcggcg
accgtctccaacgccgaggagttcggcgattggctcgacaccgttcgaggcgacaccgcg
gtcgtggtctccgagatccggcccgttcctctcgaacagcacgtcctggtgcgcggcgac
ctccttccgctcttcgatgatcgcgccggcgtcgcgacggcgcaggtcaaccgggagctg
acgcggctgcgttcgccccagggccagcgttacgagaacaaccgccgcgcgcacgctcac
cgcagcggaggaggccgcgaagcgcatcgcaagcaccgcgggggcaccgcgccggctcgc
ccgtcggcgctgcagcgcctcgagcgcatcgatcgtcccgctgtcgtcgagcttctcggc
cggtcgaacctgcttccggcgatcttcttcatcttcagccgcgccggttgcgacggtgcc
gtgcagcaggtgcgccggtcgggcctgcgactcacgacggccgaggaacgcgacgagatc
cgggcgatcgtcgaccggcgcacccgcgcgctcgctcaggaggatctcgccgtcctgggc
ttctgggaatggcgcgacaacctcgagcgcggcgtagcggcccaccacgccggtctgctt
ccggcgttcaaggaggtcgtcgaggagctcttccagcgcaagctggtgaaggccgtcttc
gcgacggagacgctggcactgggcatcaacatgcctgcccgcaccgtcgtcctcgagaag
ctcgagaagttcaacggggaagcgcgcgtggcgatcacctcgggcgagtacacccagctg
accggacgcgccggccggcggggcatcgacgtcgaggggcacgcggtcatccagtggagc
gatgggctcgacccgcaggcggtcgccgcgctggcatcgcgtcgcacatatccgctgaat
tcgagcttccgccccacctacaacatggccgtcaatctcatcgatcgcttcggtcgcgac
cgggcgcgggagatcctcgagtcgtcgttcgcccagttccaggccgaccgatcggtcgtc
gggcttgcgcgccaggtcaaggagaaggaacagacgctcgacggctacgcccgctccatg
acgtgtgatcggggggacttcgcggagtactccggcatccgtcgggagctcagcgacctc
gaaaagctcaaccgcaacgaccgcaccgcgccggcccgcatccgacagcgtcgtcaggac
gagctggcgggcctgcgtaagcggatgcagcggcatccctgccacgactgcccggatcgg
gagcaccacgcccggtgggcggaacgctactggcggctgcgccgtgacgtgcagaagctg
cggcagcagatcgacacccggaccggcacggtcgcgcgcgttttcgaccgggtggtcgac
gtcctgacggcgctcgattacgtcaccgtcggggccgatggcaccaccgtcctgacgtcg
gcgggttcgacgatgcgtcggatctacggtgaacgcgacctcctggtggccgaggcactc
cgacgcggtctgtggcgcgacctcgatcctgccggtctggcggccctcgcgtgcagtctg
gtgtacgagccgcgccgcgagagcgacggtcccggcgagtacgggcttccgcgaggcgcc
ttccgaacagcactggccgaaacgcaggagctgtgggccgtcctcgacgacctcgaacag
gaccaccgcctgcccggcaccgaaccggtggcgacgggcctcgcgaaagccatgcattcg
tgggcacgcggcgtgatgctcgaccgcgtcctgctcgaggccgacatggccgcgggcgac
ttcgtgcgctgggcgaagcagacgatcgatctcctggatcagctctccctcgtcgccgac
cccgacctggcacggacggcgcgtgctgcgctggatgccgtccggcgcggcatcgtggcc
tactccggcgtttag
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