KEGG   Microbacterium paludicola: BO218_04150
Entry
BO218_04150       CDS       T04601                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
mpal  Microbacterium paludicola
Pathway
mpal03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mpal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BO218_04150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpal03400]
    BO218_04150
DNA repair and recombination proteins [BR:mpal03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BO218_04150
SSDB
Motif
Pfam: Ku HC2
Other DBs
NCBI-ProteinID: APF33490
LinkDB
Position
complement(863337..864317)
AA seq 326 aa
MRSIWKGALTFGLVNVPVKVYSATEDHDVPLHQVHNADGGRIRYQRICEIDGEVVPYADI
DRAYDDGEQTVVLTKEDLASLPSERSREIDVVEFVPSDQIDLLTLDKAYYLEPDSSSPKS
YVLLRRTLEQTDRTAIVRFSLRQKTRLAALRVRGDVLVLQTLLWADEVREAAFPALDESV
RISAKELEMSASLVESFSSDFDPEAFTDEYQEELRTLIDAKLEKGDALDTSETFGEKAEK
EGGEVIDLMEALRASVERSRAARGGGSKTSSDDAGDGDTETPAKKSAGKSAAAKPDADEK
SPAKKAPAKKKTAAKKTPAKKSAKAS
NT seq 981 nt   +upstreamnt  +downstreamnt
atgagatcgatctggaaaggcgccctcaccttcgggctcgtcaatgtgccggtgaaggtc
tactcggcgaccgaggaccacgacgtgcccctgcaccaggtgcacaacgccgacggcggg
cgcatccgctaccagcgcatctgcgagatcgacggtgaggtcgtgccctacgccgatatc
gatcgcgcctacgacgacggcgagcagaccgtcgtgctcacgaaggaggatctggcgtcg
ttgccctccgagcggagccgcgagatcgacgtcgtcgagttcgtgccgagcgaccagatc
gatctgctgacgctcgacaaggcgtactacctcgagcccgactcgtcgtcgcccaagtcg
tacgtcctgctccgcaggaccctggagcagacggatcggaccgcgatcgtgcggttctcc
ctgcgacagaagacgcggctcgcggcgctgcgcgtgcggggcgatgtcctcgtgctgcag
acgctgctgtgggccgacgaggtccgtgaggcggcgttcccggccctcgatgagtcggtg
cgcatctcggcgaaggagctcgagatgtcggcatccctcgtcgagagcttctcgagcgac
ttcgaccccgaggcgttcacggacgagtatcaggaggagctgcggaccctcatcgacgcc
aagctcgagaagggcgacgctctcgacacctccgagaccttcggtgagaaggccgagaag
gagggcggcgaggtcatcgacctgatggaggcgctgcgcgcgagcgtcgaacgcagtcgc
gccgcgcggggcggcggctcgaagacatccagcgacgatgccggagacggcgacaccgag
acgcccgcgaagaagagcgccgggaagagtgcggcggcgaagccggatgccgacgagaag
tcgcccgcgaagaaagcgcccgctaagaagaagacggccgcgaagaagactcccgcgaag
aagagcgcgaaagcctcctga

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