Microbacterium paludicola: BO218_04610
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Entry
BO218_04610 CDS
T04601
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mpal
Microbacterium paludicola
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpal03032
]
BO218_04610
03400 DNA repair and recombination proteins [BR:
mpal03400
]
BO218_04610
Enzymes [BR:
mpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BO218_04610
DNA replication proteins [BR:
mpal03032
]
Prokaryotic type
DNA Topoisomerases
BO218_04610
DNA repair and recombination proteins [BR:
mpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BO218_04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Cas9-BH
ZT_dimer
DUF6026
Motif
Other DBs
NCBI-ProteinID:
APF33565
LinkDB
All DBs
Position
956737..959196
Genome browser
AA seq
819 aa
AA seq
DB search
MAASRTASPVPDQPERIEDVDVSAEMQGSFLEYAYSVIYSRALPDARDGLKPVQRRILFQ
MADMGLRPDKGHVKSARVVGEVMGKLHPHGDSAIYDALVRLAQDFALRVPLVDGHGNFGS
LDDGPAAARYTEARLAPSALALTENLDEDVVDFIPNYDGQFQQPAVLPAAYPNLLVNGTT
GIAVGMATNMAPHNLIEVVAAAVHLLENPDATLDELMEFVPGPDLPGGGVIVGLDGIKDA
YTNGRGTFRTRAKVSVESLGPRRTGLVVTELPYMVGPERIIEKIKDAVNAKKLTGISDVQ
DFTDRNHGLRLVITIKTGFDPNAVLEQLYRLTPLEDSFGINNVALVEGQPQTLGLKELLR
VYLDHRIEVVTRRSRYRLARKQERLHLVEGLLIAILDIDEVIQVIRTSDDGEQARTRLID
VFDLSQPQAEYILELRLRRLTKFSRIELETERDQLKAEIAHLQELLASDVLLRAQVAREL
EAAAETYGTPRRTLLLNGGPVTARSGKKAAADLQIADAPCRVFLSATGRMVRAELGEDLL
SSGIVPPARRSKHDAIRSAVDATVRGDLGAVTSTGRLVRFSPVDLPSVPGNSVQLAAGSK
ADQYLGLGAGEHVVAIVPLTGEPPIALGTAQGVVKRVAATELAAGKPDAEIISLKPGDRV
VGAAPAPDGSELVFVTSDAQLLRFDAAAVRPQGRAAGGMAGVRVADGERVIAFTAVAASD
DTVVVTIAGSTQSLAGADAGSGKVSAFSEFPAKGRATGGVRAQRFLRGEDTLTVAWVGDS
PRAVGPDGATRSLPEAGAKRDASGQPLDGVIGAIGTVVA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatcccgcaccgcttcacccgtccccgaccagccggagcgcatcgaggacgtc
gacgtctcagcggagatgcagggatcgttcctcgaatacgcctactcggtcatctactcg
cgcgctctccccgacgctcgcgacggcctgaagccggtgcagcggcgcatcctcttccag
atggccgacatgggccttcgccccgacaagggccacgtcaagagcgcccgtgtcgttggt
gaagtgatgggaaagctgcacccgcacggcgattcggcgatctacgacgcgctcgtccgc
ctcgcgcaggacttcgctctgcgggtgcccctggtcgacggtcacggcaacttcggctcg
ctcgacgacggccccgcggcagcgcggtacaccgaggcgcggctcgcgccgtctgctctc
gccctcaccgagaacctcgacgaggacgtcgtcgacttcatcccgaactacgacggtcag
ttccagcagccggcggtcctgcccgccgcataccccaacctgctggtcaacggcacgacc
ggcatcgcggtcggtatggcgacgaacatggcgccgcacaatctcatcgaggtcgtcgcg
gcagccgtgcaccttctcgagaatcccgatgcgacgctcgacgagctcatggagttcgtt
ccgggccccgacctgcccggcggcggcgtgatcgtgggtctggacggcatcaaggatgcc
tacaccaacgggcgcggcaccttccgcacccgcgcgaaggtgtcggtggagtcgctgggt
ccgcgccgcaccggcctcgtcgtcaccgagctgccctacatggtcggtcccgagcggatc
atcgagaagatcaaagatgcggtcaacgccaagaagctgaccggcatctctgatgtccag
gacttcaccgatcgcaaccacgggctgcgtctcgtcatcacgatcaagaccggattcgac
cccaacgcggtgctcgagcagctctaccggttgaccccgctggaggactccttcggcatc
aacaacgtcgcgctcgtcgagggacagccccagaccctcgggctcaaggagctcctccgg
gtgtatctcgaccaccgcatcgaggtggtcacgcgacgcagccgttaccggctggccagg
aagcaggagcgcctgcacctcgtcgagggactgctgatcgcgattctcgacatcgacgag
gtcatccaggtcatccgcacctcggatgacggcgagcaggcgaggacgcgactgatcgac
gtcttcgatctctcgcagccgcaagccgagtacatcctcgaactgcgtctgcgccgcctg
acgaagttctcccgtatcgagctggagaccgagcgcgaccagctgaaggccgagatcgca
cacctccaggagctcctcgcgagcgacgtgctactgcgagcccaggtggcccgcgaactc
gaggcggcggccgagacctacggcacgccccgtcgcacgctgctgctcaacggcggcccc
gtgaccgcgcgctcgggcaagaaggccgccgccgacctgcagatcgccgacgcgccctgc
cgcgtcttcctctcggcgaccggccggatggtccgagcagagctcggcgaagacctgctc
agcagcggcatcgttccgcccgcccggcgcagcaagcacgacgccatccgctccgccgtc
gacgcgacggtccgcggtgacctcggcgccgtcaccagcaccggacgcctcgtgcgcttc
tcccccgtcgacctgccgtcggtcccgggcaacagcgttcagctcgcggcgggctcgaag
gccgaccagtatctcgggctcggagccggtgagcacgtcgtggcgatcgtgccgttgacc
ggcgaaccgcccatcgccctcggcacggcgcagggcgtcgtcaagcgcgtcgcggcgacc
gagctggcggcgggcaagcccgacgccgagatcatctcgctcaagcccggcgaccgcgtc
gtcggcgccgccccggcacccgacggctccgaactggttttcgtcacctccgacgcccag
ctgctgcgattcgatgcggcggcggtgcgtccgcagggccgcgcagccggcggaatggcg
ggggtccgtgtcgcggacggtgagcgcgtcatcgcgttcaccgcggtcgcggcatccgat
gacacggtcgtcgtgacgatcgcgggctcgacgcagtccctcgccggggccgatgccggc
agcggcaaggtgtcggcgttctcggagttccccgcgaagggacgcgcgaccggcggagtc
cgggctcagcggttcctgcgcggcgaggacacgctgaccgtcgcgtgggtgggcgactcc
ccgcgcgcggtcggccccgacggtgcgacgcggagcctgcccgaggccggggctaagcgc
gacgcctccggccagccgctcgacggcgtcatcggcgcgatcggcaccgtcgtcgcctga
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