Microbacterium paludicola: BO218_05220
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Entry
BO218_05220 CDS
T04601
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mpal
Microbacterium paludicola
Pathway
mpal03030
DNA replication
mpal03430
Mismatch repair
mpal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BO218_05220
03430 Mismatch repair
BO218_05220
03440 Homologous recombination
BO218_05220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpal03032
]
BO218_05220
03400 DNA repair and recombination proteins [BR:
mpal03400
]
BO218_05220
Enzymes [BR:
mpal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BO218_05220
DNA replication proteins [BR:
mpal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BO218_05220
DNA repair and recombination proteins [BR:
mpal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BO218_05220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
APF35661
LinkDB
All DBs
Position
complement(1082146..1085616)
Genome browser
AA seq
1156 aa
AA seq
DB search
MLDGAAKIAAMTQAAADYGMPAIAVTDHGNTFAAFEFYRAAQAAGVKPIIGLEAYVTPGT
HRSDKSRVAWGSPEQKSDDVSGSGAYTHMTMWSQSTEGMHNLFRLSSLSSMEGYYFKPRM
DRELLQTYGKGLIATTGCPSGEVQTRLRLGQYDAARAAAAEFQDIFGKENYFAEIMDHGL
SIERRVMTDLLRLAKDLDIPLVATNDSHYTHQHEADAHAALLCVQSGSTLDDPNRFKFDG
DGYYIKTAQEMRQLFRDHPEACDNTLLIAERCEVEFNTSANYMPRFPVPDGETEDSWLVK
EVEAGLHYRYPGGIPDKVRKQAEYETGIILQMGFPGYFLVVADFINWAKDNGIRVGPGRG
SGAGSMVAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFDDRRRGEVIEYVTEKYG
SERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGEKLTKAMPPAVMGKDMPLDGMFNKDHP
RFKEASEFRALIDTDPEAKTVFDRALGLEGLKRQWGVHAAGVIMSSEPLLDIIPIMRREQ
DGQIVTQFDYPSCETLGLIKMDFLGLRNLTIISDALDNIRMNRGEELDLEHLALDDRPAY
DLLTRGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVIALYRPGPMGANSHTNYALRKNG
LQPITPIHPELEEPLRDILDTTYGLIIYQEQVMAIAQKVAGFSLGQADILRRAMGKKKKS
ELDKQYEGFSGGMKERGFGEGAIQALWDILLPFSDYAFNKAHSAAYGLVSYWTAYLKAHY
PAEYMAALLTSVGDSKDKMAVYLNECRRMGIKVLPPDVGESIRYFAAVGEDIRFGLGAVR
NVGANVVDGIIASRADDNYVSFHDFLTKVPLHVANKRTVESLIKAGAFDSLGSTRRALME
IHEDAVEAAVDAKRKAATGAIGFDFDSLYDEAEEVMPAKVPERPEWTKKDKLAFEREMLG
LYVSDHPLAGLEIPLAKHASTSIHDLLASEDVQDGDQVTVAGLVTSVQHRVAKQSGNPYG
MITVEDFDGEVTVMFMGKTYTEFQSMLVADSILVVRGRVSRRDDGLNLHGQSAFSPDLGS
FDAAGPLVLLLPEQRATESTIGELAAVLRRHSGETEVSLKLHRAGTAKVFEVPHPVRVTP
DLYGELKGLLGPQCLG
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggtgcagccaagatcgcggccatgacccaggcggcggccgactacggcatg
ccggcgatcgcggtgaccgaccacggcaacacgttcgccgccttcgagttctaccgcgcc
gcccaggcggcgggggtcaaaccgatcatcggtctcgaggcgtacgtgactccgggaacg
caccgcagcgacaagtcgcgcgtggcctgggggtcgcccgagcagaagagcgacgatgtg
tcgggttccggcgcctacacccacatgacgatgtggagccagagcaccgagggcatgcac
aacctcttccggctgagctcgctgtcgagcatggagggctactacttcaagccgcgcatg
gaccgcgagctgctgcagacctatggcaaggggctcatcgcgacgacgggatgtccctcg
ggggaggtgcagacccggctccgtctcggccagtacgacgccgctcgcgccgcggcggcg
gagttccaggacatcttcggcaaggagaactacttcgccgagatcatggaccacggcctg
tcgatcgagcgccgggtgatgaccgacctgctgcggctggcgaaagacctcgacatcccg
ctggtcgcgaccaacgactcccactacacgcatcagcacgaagccgatgctcacgccgcg
ctgctctgcgtgcagtccggatcgacgctcgacgacccgaaccgcttcaagttcgacggc
gacggctattacatcaagaccgcgcaggagatgcggcagctcttccgcgaccaccccgag
gcgtgcgacaacaccctgctcatcgccgagcgttgcgaggtcgagttcaacacctcggcc
aactacatgccgcggttcccggtgcccgacggcgagaccgaagacagctggctcgtcaaa
gaggtcgaggccgggctgcactaccgataccccggcggcatccccgacaaggtgcgcaag
caggccgagtacgagacgggcatcatcctgcagatgggcttcccgggctacttcctcgtc
gtcgccgacttcatcaactgggcgaaggacaacggcatccgcgtcggccccgggcgcggg
tcgggcgccggctcgatggtggcgtacgccatgcgcatcaccgacctcgatccgctcgag
cacggtctcatcttcgagcgattcctcaatcccgaccgcgtcagcatgcccgacttcgac
gtcgacttcgacgaccgtcgtcgcggcgaggtcatcgagtacgtgaccgagaagtacggc
tccgagcgtgtcgcgcagatcgtcacctacggcacgatcaagtcgaagcaggcgctgaag
gatgccgggcgcgtgctcggtttccccttcagcatgggcgagaagctcaccaaggcgatg
ccgccggccgtgatgggcaaggacatgccgctcgacggcatgttcaacaaggaccacccg
cggttcaaggaggccagcgagttccgcgccctgatcgacaccgatcccgaggcgaagacc
gtgttcgaccgcgctctcgggctcgaaggcctgaagcggcagtggggcgtgcatgcggcc
ggcgtcatcatgtcgtcggaaccgctcctcgacatcatcccgatcatgcgtcgcgagcag
gacggtcagatcgtcacgcagttcgactacccgtcgtgcgagacgctcggtctgatcaag
atggacttcctggggctgcgtaacctcacgatcatctcggatgcgctcgacaacatccgc
atgaaccggggtgaggagctcgacctcgagcatctcgccctcgacgaccgcccggcctac
gatctgctcacccgcggcgacacgctcggggtgttccagctcgatggcgggccgatgcga
tcgctgctccgcctgatgaagcccgacaacttcgaggacatctcggctgtcatcgcgctg
taccgcccgggacccatgggtgcgaactcgcacacgaactacgcgctgcggaagaacggc
ctgcagccgatcacgccgatccaccccgagctcgaagagccgctgcgcgacatcctcgac
acgacctacggcctgatcatctaccaggagcaggtcatggcgatcgctcagaaggtcgcc
ggcttctcgctcggacaagcagacatcctccgccgcgcgatgggtaagaagaagaagtcc
gagctcgacaagcagtacgagggcttctcgggcggtatgaaggagcgcggcttcggcgag
ggcgcgattcaggcgctctgggacatcctgctcccgttctccgactacgccttcaacaaa
gcgcactcggccgcctatgggctcgtctcgtattggacggcctacctcaaggctcactat
cccgccgagtacatggccgccctgctcacgagcgtcggcgactcgaaagacaagatggcg
gtgtacctgaacgagtgccgccgcatgggcatcaaggtactgccgcccgacgtcggcgag
tcgatccgatacttcgccgccgtcggtgaagacatccgattcggcctgggcgcggtccgc
aacgtcggtgcgaacgtcgtcgacggcatcatcgcctcgcgcgccgacgacaactacgtc
agcttccacgacttcctcacgaaggtcccgctccacgtcgccaacaagcgcaccgtcgag
tccctcatcaaggctggggccttcgactcgctcggatctacccgccgcgcactcatggag
atccacgaggatgcggtcgaagcggcggtcgacgccaagcgcaaggccgccaccggtgcg
atcggattcgacttcgacagcctgtacgacgaggccgaagaggtgatgccggccaaggtg
cccgaacgccccgagtggacgaagaaggacaaactcgccttcgagcgcgagatgctcggg
ctctacgtgtccgaccacccgttggccggactcgagataccgctggccaagcacgcgtcg
acgtcgatccacgacctgctcgcttcggaagacgtccaggacggcgatcaggtcaccgtc
gccgggctcgtgacgagcgtgcagcaccgcgtggcgaagcagagcggcaatccctacggc
atgatcaccgtcgaggacttcgacggtgaggtgaccgtgatgttcatgggaaagacctac
acggagttccagagcatgctggtggccgactcgatcctcgtcgtccgaggacgggtgtcg
cgtcgcgacgatgggctgaacctccacggtcagtcggccttctctcccgacctcggttcg
ttcgatgccgcggggccgctcgtgctgctgcttccggagcagcgggcgacggaatcgacg
atcggcgagctggcggccgtcctgcggcgccacagtggcgagaccgaggtctcgctcaag
cttcacagagccggtaccgcgaaggtcttcgaggtaccgcatccggtgcgcgtcaccccc
gatctctacggtgaactcaagggacttctgggacctcagtgtctgggttga
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